EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000019523 (Gene tree)
Gene ID
102294529
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Plus strand
Length
15805 bases
Position
chrJH425797.1:68610-84414
Accession
102294529
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000017474RRM_1PF00076.222.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000034666-3558XM_005945993ENSHBUP00000017474232 (aa)XP_005946055UPI00022B2AF2
Gene Model
Click here to download ENSHBUG00000019523's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019523's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000019523pabpn18256.633ENSHBUG00000002388PABPN1L6558.564
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000019523pabpn18682.524ENSG00000100836PABPN19482.143Homo_sapiens
ENSHBUG00000019523pabpn19972.532ENSG00000258643BCL2L2-PABPN17072.532Homo_sapiens
ENSHBUG00000019523pabpn110098.707ENSAPOG00000016425pabpn110098.707Acanthochromis_polyacanthus
ENSHBUG00000019523pabpn18184.211ENSAMEG00000007048BCL2L2-PABPN110084.211Ailuropoda_melanoleuca
ENSHBUG00000019523pabpn19498.190ENSACIG00000021744pabpn1100100.000Amphilophus_citrinellus
ENSHBUG00000019523pabpn110098.707ENSAOCG00000015805pabpn110098.707Amphiprion_ocellaris
ENSHBUG00000019523pabpn110098.707ENSAPEG00000009623pabpn110098.707Amphiprion_percula
ENSHBUG00000019523pabpn110099.138ENSATEG00000020531pabpn110099.138Anabas_testudineus
ENSHBUG00000019523pabpn18185.263ENSACAG00000006185-8172.500Anolis_carolinensis
ENSHBUG00000019523pabpn18483.838ENSANAG00000024513-8476.033Aotus_nancymaae
ENSHBUG00000019523pabpn19497.748ENSACLG00000016374pabpn17797.748Astatotilapia_calliptera
ENSHBUG00000019523pabpn110097.425ENSAMXG00000000452pabpn110097.425Astyanax_mexicanus
ENSHBUG00000019523pabpn18476.531ENSBTAG00000050594-7475.481Bos_taurus
ENSHBUG00000019523pabpn18183.333ENSBTAG00000053753-7183.333Bos_taurus
ENSHBUG00000019523pabpn18483.838ENSBTAG00000006884PABPN18669.697Bos_taurus
ENSHBUG00000019523pabpn16258.904WBGene00003904pabp-28453.977Caenorhabditis_elegans
ENSHBUG00000019523pabpn19975.966ENSCJAG00000007960-8476.395Callithrix_jacchus
ENSHBUG00000019523pabpn17180.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSHBUG00000019523pabpn18682.524ENSCAFG00000011482PABPN18671.212Canis_familiaris
ENSHBUG00000019523pabpn18682.524ENSCAFG00020007298-8670.833Canis_lupus_dingo
ENSHBUG00000019523pabpn18682.524ENSCAFG00020006651-8670.833Canis_lupus_dingo
ENSHBUG00000019523pabpn18682.524ENSCHIG00000012184PABPN18670.833Capra_hircus
ENSHBUG00000019523pabpn19972.532ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSHBUG00000019523pabpn15982.014ENSCAPG00000009461-9185.156Cavia_aperea
ENSHBUG00000019523pabpn18682.039ENSCPOG00000025574PABPN16881.818Cavia_porcellus
ENSHBUG00000019523pabpn19975.966ENSCCAG00000033954BCL2L2-PABPN18476.395Cebus_capucinus
ENSHBUG00000019523pabpn19975.966ENSCATG00000038536BCL2L2-PABPN18476.395Cercocebus_atys
ENSHBUG00000019523pabpn16582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSHBUG00000019523pabpn18681.068ENSCSAG00000016036PABPN18669.697Chlorocebus_sabaeus
ENSHBUG00000019523pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN19270.909Choloepus_hoffmanni
ENSHBUG00000019523pabpn17183.929ENSCPBG00000026060-9483.929Chrysemys_picta_bellii
ENSHBUG00000019523pabpn19064.929ENSCING00000012468-8961.611Ciona_intestinalis
ENSHBUG00000019523pabpn17666.854ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSHBUG00000019523pabpn18571.717ENSCANG00000030980-8764.706Colobus_angolensis_palliatus
ENSHBUG00000019523pabpn19972.532ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSHBUG00000019523pabpn18682.039ENSCGRG00001019696Pabpn19481.548Cricetulus_griseus_chok1gshd
ENSHBUG00000019523pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSHBUG00000019523pabpn110097.414ENSCSEG00000008774pabpn110097.414Cynoglossus_semilaevis
ENSHBUG00000019523pabpn110093.162ENSCVAG00000003152pabpn110094.444Cyprinodon_variegatus
ENSHBUG00000019523pabpn18154.011ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSHBUG00000019523pabpn110097.414ENSDARG00000045373pabpn110097.414Danio_rerio
ENSHBUG00000019523pabpn18682.524ENSDNOG00000023682PABPN18670.833Dasypus_novemcinctus
ENSHBUG00000019523pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSHBUG00000019523pabpn18681.553ENSDORG00000028966-8669.697Dipodomys_ordii
ENSHBUG00000019523pabpn110057.983FBgn0005648Pabp29259.535Drosophila_melanogaster
ENSHBUG00000019523pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSHBUG00000019523pabpn18682.524ENSEASG00005011716PABPN18670.833Equus_asinus_asinus
ENSHBUG00000019523pabpn18581.863ENSECAG00000011652PABPN18171.074Equus_caballus
ENSHBUG00000019523pabpn18680.097ENSEEUG00000012973-7176.077Erinaceus_europaeus
ENSHBUG00000019523pabpn110094.937ENSELUG00000022654pabpn110094.937Esox_lucius
ENSHBUG00000019523pabpn18682.524ENSFCAG00000031922PABPN18670.833Felis_catus
ENSHBUG00000019523pabpn17182.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSHBUG00000019523pabpn110095.690ENSFHEG00000007215pabpn110095.690Fundulus_heteroclitus
ENSHBUG00000019523pabpn19595.928ENSGMOG00000003922pabpn17895.928Gadus_morhua
ENSHBUG00000019523pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSHBUG00000019523pabpn110097.863ENSGAFG00000017099pabpn110097.863Gambusia_affinis
ENSHBUG00000019523pabpn19597.273ENSGACG00000002167pabpn110091.903Gasterosteus_aculeatus
ENSHBUG00000019523pabpn19975.966ENSGGOG00000022683-8476.395Gorilla_gorilla
ENSHBUG00000019523pabpn18969.712ENSGGOG00000039675-9165.833Gorilla_gorilla
ENSHBUG00000019523pabpn19466.239ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSHBUG00000019523pabpn18682.039ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSHBUG00000019523pabpn17164.671ENSHGLG00000009842-9364.671Heterocephalus_glaber_female
ENSHBUG00000019523pabpn18769.565ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSHBUG00000019523pabpn18769.565ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSHBUG00000019523pabpn19471.493ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSHBUG00000019523pabpn17169.767ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSHBUG00000019523pabpn110097.845ENSHCOG00000004655pabpn110097.845Hippocampus_comes
ENSHBUG00000019523pabpn110089.224ENSIPUG00000000180-9989.224Ictalurus_punctatus
ENSHBUG00000019523pabpn110096.983ENSIPUG00000008085PABPN110096.983Ictalurus_punctatus
ENSHBUG00000019523pabpn17182.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSHBUG00000019523pabpn17182.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSHBUG00000019523pabpn110097.425ENSKMAG00000018748pabpn110097.425Kryptolebias_marmoratus
ENSHBUG00000019523pabpn110099.138ENSLBEG00000027266pabpn110099.138Labrus_bergylta
ENSHBUG00000019523pabpn17587.640ENSLACG00000000646pabpn18184.865Latimeria_chalumnae
ENSHBUG00000019523pabpn19594.091ENSLOCG00000000796pabpn17793.868Lepisosteus_oculatus
ENSHBUG00000019523pabpn19066.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSHBUG00000019523pabpn16582.781ENSLAFG00000031227-10082.237Loxodonta_africana
ENSHBUG00000019523pabpn16174.825ENSMFAG00000031355-9975.352Macaca_fascicularis
ENSHBUG00000019523pabpn19972.532ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSHBUG00000019523pabpn18668.780ENSMMUG00000048382-8959.259Macaca_mulatta
ENSHBUG00000019523pabpn19972.532ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSHBUG00000019523pabpn19975.966ENSMNEG00000045065BCL2L2-PABPN18476.395Macaca_nemestrina
ENSHBUG00000019523pabpn17969.519ENSMNEG00000035750-9975.352Macaca_nemestrina
ENSHBUG00000019523pabpn19972.532ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSHBUG00000019523pabpn17267.066ENSMLEG00000034623-9973.239Mandrillus_leucophaeus
ENSHBUG00000019523pabpn19997.817ENSMAMG00000007979pabpn17997.817Mastacembelus_armatus
ENSHBUG00000019523pabpn195100.000ENSMZEG00005011904pabpn177100.000Maylandia_zebra
ENSHBUG00000019523pabpn19972.532ENSMAUG00000007383Gm205218770.611Mesocricetus_auratus
ENSHBUG00000019523pabpn19976.395ENSMICG00000010002BCL2L2-PABPN18477.119Microcebus_murinus
ENSHBUG00000019523pabpn19972.103ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSHBUG00000019523pabpn110099.569ENSMMOG00000005405pabpn110099.569Mola_mola
ENSHBUG00000019523pabpn18579.208ENSMODG00000004535-7970.661Monodelphis_domestica
ENSHBUG00000019523pabpn19998.253ENSMALG00000019612pabpn17898.253Monopterus_albus
ENSHBUG00000019523pabpn19971.674MGP_CAROLIEiJ_G0019276Gm205217071.674Mus_caroli
ENSHBUG00000019523pabpn18681.068MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSHBUG00000019523pabpn18681.553ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSHBUG00000019523pabpn19972.103ENSMUSG00000092232Gm205217072.103Mus_musculus
ENSHBUG00000019523pabpn19972.103MGP_PahariEiJ_G0030294Gm205217072.103Mus_pahari
ENSHBUG00000019523pabpn18681.553MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSHBUG00000019523pabpn18681.553MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSHBUG00000019523pabpn19972.103MGP_SPRETEiJ_G0020165Gm205217072.103Mus_spretus
ENSHBUG00000019523pabpn16682.051ENSMPUG00000006775-8784.247Mustela_putorius_furo
ENSHBUG00000019523pabpn18481.313ENSMLUG00000028677-8573.305Myotis_lucifugus
ENSHBUG00000019523pabpn18183.158ENSMLUG00000003800-10083.158Myotis_lucifugus
ENSHBUG00000019523pabpn18879.524ENSMLUG00000012452-8271.032Myotis_lucifugus
ENSHBUG00000019523pabpn19972.961ENSNGAG00000019529Gm205217072.961Nannospalax_galili
ENSHBUG00000019523pabpn195100.000ENSNBRG00000023955pabpn1100100.000Neolamprologus_brichardi
ENSHBUG00000019523pabpn19972.532ENSNLEG00000015007-7482.297Nomascus_leucogenys
ENSHBUG00000019523pabpn18669.756ENSNLEG00000030598-7767.788Nomascus_leucogenys
ENSHBUG00000019523pabpn16460.135ENSNLEG00000035292-9960.135Nomascus_leucogenys
ENSHBUG00000019523pabpn18674.384ENSODEG00000003739-8863.035Octodon_degus
ENSHBUG00000019523pabpn19972.103ENSODEG00000002083BCL2L2-PABPN16881.818Octodon_degus
ENSHBUG00000019523pabpn17672.626ENSODEG00000011555-8971.429Octodon_degus
ENSHBUG00000019523pabpn195100.000ENSONIG00000008112pabpn177100.000Oreochromis_niloticus
ENSHBUG00000019523pabpn16384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSHBUG00000019523pabpn18682.039ENSOCUG00000016174PABPN19570.611Oryctolagus_cuniculus
ENSHBUG00000019523pabpn19998.253ENSORLG00000027900pabpn19098.585Oryzias_latipes
ENSHBUG00000019523pabpn19998.253ENSORLG00020004681pabpn17898.253Oryzias_latipes_hni
ENSHBUG00000019523pabpn110098.707ENSORLG00015000018pabpn110098.707Oryzias_latipes_hsok
ENSHBUG00000019523pabpn19598.182ENSOMEG00000016618pabpn18298.174Oryzias_melastigma
ENSHBUG00000019523pabpn18682.524ENSOGAG00000008710PABPN18670.833Otolemur_garnettii
ENSHBUG00000019523pabpn19972.532ENSOARG00000019336BCL2L2-PABPN16472.532Ovis_aries
ENSHBUG00000019523pabpn17167.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSHBUG00000019523pabpn19972.532ENSPPAG00000028984BCL2L2-PABPN18784.247Pan_paniscus
ENSHBUG00000019523pabpn18682.524ENSPPRG00000010567PABPN18670.833Panthera_pardus
ENSHBUG00000019523pabpn17182.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSHBUG00000019523pabpn19975.966ENSPTRG00000006167BCL2L28476.395Pan_troglodytes
ENSHBUG00000019523pabpn110063.248ENSPTRG00000047273-9360.714Pan_troglodytes
ENSHBUG00000019523pabpn19975.966ENSPANG00000021100BCL2L2-PABPN18476.395Papio_anubis
ENSHBUG00000019523pabpn18470.202ENSPANG00000023326-9976.056Papio_anubis
ENSHBUG00000019523pabpn16970.625ENSPKIG00000008340pabpn1l8467.442Paramormyrops_kingsleyae
ENSHBUG00000019523pabpn110091.845ENSPKIG00000018052pabpn110094.850Paramormyrops_kingsleyae
ENSHBUG00000019523pabpn19995.197ENSPKIG00000008144-7895.197Paramormyrops_kingsleyae
ENSHBUG00000019523pabpn15877.612ENSPSIG00000011959-9181.301Pelodiscus_sinensis
ENSHBUG00000019523pabpn19597.727ENSPMGG00000022027pabpn18197.727Periophthalmus_magnuspinnatus
ENSHBUG00000019523pabpn19972.532ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSHBUG00000019523pabpn17975.806ENSPMAG00000006212pabpn19965.289Petromyzon_marinus
ENSHBUG00000019523pabpn18680.000ENSPCIG00000027751-8670.455Phascolarctos_cinereus
ENSHBUG00000019523pabpn110096.581ENSPFOG00000010351pabpn19996.581Poecilia_formosa
ENSHBUG00000019523pabpn19996.970ENSPLAG00000022696pabpn17996.970Poecilia_latipinna
ENSHBUG00000019523pabpn110096.581ENSPMEG00000020856pabpn110096.581Poecilia_mexicana
ENSHBUG00000019523pabpn110097.009ENSPREG00000011278pabpn110097.009Poecilia_reticulata
ENSHBUG00000019523pabpn18182.474ENSPPYG00000005663PABPN18671.074Pongo_abelii
ENSHBUG00000019523pabpn17969.271ENSPCAG00000005902PABPN18259.836Procavia_capensis
ENSHBUG00000019523pabpn19976.395ENSPCOG00000028047BCL2L2-PABPN18477.119Propithecus_coquereli
ENSHBUG00000019523pabpn18880.861ENSPVAG00000005270PABPN18669.582Pteropus_vampyrus
ENSHBUG00000019523pabpn1100100.000ENSPNYG00000013182pabpn1100100.000Pundamilia_nyererei
ENSHBUG00000019523pabpn18861.836ENSPNAG00000021666pabpn1l8469.591Pygocentrus_nattereri
ENSHBUG00000019523pabpn110098.276ENSPNAG00000023526pabpn110098.276Pygocentrus_nattereri
ENSHBUG00000019523pabpn18682.039ENSRNOG00000042195Pabpn18570.611Rattus_norvegicus
ENSHBUG00000019523pabpn18871.292ENSRBIG00000042811-9567.401Rhinopithecus_bieti
ENSHBUG00000019523pabpn19471.946ENSRBIG00000040762BCL2L2-PABPN16572.986Rhinopithecus_bieti
ENSHBUG00000019523pabpn18972.170ENSRBIG00000039547-8266.964Rhinopithecus_bieti
ENSHBUG00000019523pabpn19471.946ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSHBUG00000019523pabpn18867.773ENSRROG00000036409-7064.629Rhinopithecus_roxellana
ENSHBUG00000019523pabpn19467.411ENSRROG00000040409-8267.411Rhinopithecus_roxellana
ENSHBUG00000019523pabpn19968.699ENSSBOG00000026930BCL2L2-PABPN18784.247Saimiri_boliviensis_boliviensis
ENSHBUG00000019523pabpn18181.481ENSSHAG00000014841-8783.684Sarcophilus_harrisii
ENSHBUG00000019523pabpn19962.605ENSSHAG00000007707-9959.244Sarcophilus_harrisii
ENSHBUG00000019523pabpn110089.700ENSSFOG00015012565pabpn110089.700Scleropages_formosus
ENSHBUG00000019523pabpn16173.944ENSSFOG00015015833pabpn1l7868.235Scleropages_formosus
ENSHBUG00000019523pabpn110096.121ENSSFOG00015014718pabpn110096.121Scleropages_formosus
ENSHBUG00000019523pabpn110098.707ENSSMAG00000020157pabpn110098.707Scophthalmus_maximus
ENSHBUG00000019523pabpn19998.690ENSSDUG00000020582pabpn17898.690Seriola_dumerili
ENSHBUG00000019523pabpn110099.138ENSSLDG00000007118pabpn110099.138Seriola_lalandi_dorsalis
ENSHBUG00000019523pabpn17183.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSHBUG00000019523pabpn110098.283ENSSPAG00000021658pabpn110098.283Stegastes_partitus
ENSHBUG00000019523pabpn19262.673ENSSSCG00000034805-7958.768Sus_scrofa
ENSHBUG00000019523pabpn19972.532ENSSSCG00000002023PABPN18670.833Sus_scrofa
ENSHBUG00000019523pabpn110097.414ENSTRUG00000023664pabpn110097.414Takifugu_rubripes
ENSHBUG00000019523pabpn19292.558ENSTNIG00000005369pabpn19096.907Tetraodon_nigroviridis
ENSHBUG00000019523pabpn18682.524ENSUAMG00000024460PABPN16882.297Ursus_americanus
ENSHBUG00000019523pabpn19972.532ENSUMAG00000014288BCL2L2-PABPN17072.532Ursus_maritimus
ENSHBUG00000019523pabpn19972.532ENSVVUG00000019912BCL2L2-PABPN17682.990Vulpes_vulpes
ENSHBUG00000019523pabpn18485.204ENSXETG00000014597pabpn17381.944Xenopus_tropicalis
ENSHBUG00000019523pabpn17585.143ENSXCOG00000005158pabpn19885.143Xiphophorus_couchianus
ENSHBUG00000019523pabpn110097.436ENSXMAG00000006196pabpn110097.436Xiphophorus_maculatus

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