EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019660 (Gene tree)
Gene ID: 106632327
Gene Symbol: prdm14
Alias: fc16b12|wu:fc16b12
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 3925 bases
Position: chrJH425322.1:3578365-3582289
Accession: 106632327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017571	zf-C2H2	PF00096.26	6.4e-21	1	2
ENSHBUP00000017571	zf-C2H2	PF00096.26	6.4e-21	2	2
ENSHBUP00000017571	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034709	-	1803	XM_014336101	ENSHBUP00000017571	600 (aa)	XP_014191587	UPI0006C95BE8

Gene Model

Click here to download ENSHBUG00000019660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019660	prdm14	57	34.074	ENSHBUG00000018577	PRDM15	71	33.714
ENSHBUG00000019660	prdm14	55	38.662	ENSHBUG00000022537	-	68	35.873
ENSHBUG00000019660	prdm14	55	41.667	ENSHBUG00000022878	prdm12b	66	37.358
ENSHBUG00000019660	prdm14	53	37.278	ENSHBUG00000023375	prdm5	94	37.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019660	prdm14	100	83.660	ENSACIG00000022698	prdm14	100	86.601	Amphilophus_citrinellus
ENSHBUG00000019660	prdm14	100	88.562	ENSACLG00000025407	prdm14	100	92.962	Astatotilapia_calliptera
ENSHBUG00000019660	prdm14	63	72.944	ENSAMXG00000000512	prdm14	90	66.287	Astyanax_mexicanus
ENSHBUG00000019660	prdm14	89	51.779	ENSBTAG00000000060	PRDM14	67	66.142	Bos_taurus
ENSHBUG00000019660	prdm14	63	65.274	ENSCHIG00000009297	PRDM14	67	65.274	Capra_hircus
ENSHBUG00000019660	prdm14	66	63.840	ENSTSYG00000010610	PRDM14	97	63.840	Carlito_syrichta
ENSHBUG00000019660	prdm14	62	64.987	ENSCPOG00000027176	PRDM14	78	62.255	Cavia_porcellus
ENSHBUG00000019660	prdm14	63	56.878	ENSCCAG00000026032	PRDM14	64	58.995	Cebus_capucinus
ENSHBUG00000019660	prdm14	91	50.262	ENSCLAG00000001937	PRDM14	99	49.738	Chinchilla_lanigera
ENSHBUG00000019660	prdm14	83	72.763	ENSGACG00000002829	prdm14	100	71.485	Gasterosteus_aculeatus
ENSHBUG00000019660	prdm14	100	99.667	ENSMZEG00005021597	prdm14	100	99.667	Maylandia_zebra
ENSHBUG00000019660	prdm14	100	98.669	ENSNBRG00000023669	prdm14	100	98.669	Neolamprologus_brichardi
ENSHBUG00000019660	prdm14	86	50.919	ENSODEG00000003245	PRDM14	95	50.185	Octodon_degus
ENSHBUG00000019660	prdm14	63	65.535	ENSOARG00000003528	PRDM14	77	65.535	Ovis_aries
ENSHBUG00000019660	prdm14	100	99.000	ENSPNYG00000001938	prdm14	100	99.000	Pundamilia_nyererei
ENSHBUG00000019660	prdm14	100	85.265	ENSSDUG00000013311	prdm14	100	84.934	Seriola_dumerili
ENSHBUG00000019660	prdm14	100	85.430	ENSSLDG00000006506	prdm14	100	85.099	Seriola_lalandi_dorsalis
ENSHBUG00000019660	prdm14	62	87.166	ENSTNIG00000008194	prdm14	99	87.166	Tetraodon_nigroviridis