EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019672 (Gene tree)
Gene ID: 102313746
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 7815 bases
Position: chrJH425395.1:2058265-2066079
Accession: 102313746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033005	zf-C2H2	PF00096.26	1.3e-18	1	2
ENSHBUP00000033005	zf-C2H2	PF00096.26	1.3e-18	2	2
ENSHBUP00000033011	zf-C2H2	PF00096.26	2.1e-16	1	1
ENSHBUP00000017587	zf-C2H2	PF00096.26	2.2e-16	1	1
ENSHBUP00000033005	zf-met	PF12874.7	7.8e-11	1	2
ENSHBUP00000033005	zf-met	PF12874.7	7.8e-11	2	2
ENSHBUP00000017587	zf-met	PF12874.7	2.5e-10	1	2
ENSHBUP00000017587	zf-met	PF12874.7	2.5e-10	2	2
ENSHBUP00000033011	zf-met	PF12874.7	2.5e-10	1	2
ENSHBUP00000033011	zf-met	PF12874.7	2.5e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000026404	-	3408	-	ENSHBUP00000017587	1135 (aa)	-	-
ENSHBUT00000034725	-	6066	XM_005925861	ENSHBUP00000033005	1196 (aa)	XP_005925923	UPI0003BDB900
ENSHBUT00000026446	-	6157	-	ENSHBUP00000033011	1136 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000019672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019672	si:ch211-212k18.5	75	55.769	ENSHBUG00000002882	sall2	74	44.715

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019672	si:ch211-212k18.5	100	79.789	ENSAPOG00000013387	si:ch211-212k18.5	100	79.545	Acanthochromis_polyacanthus
ENSHBUG00000019672	si:ch211-212k18.5	76	54.098	ENSAPOG00000015347	sall2	71	72.222	Acanthochromis_polyacanthus
ENSHBUG00000019672	si:ch211-212k18.5	85	90.535	ENSACIG00000019922	si:ch211-212k18.5	99	90.525	Amphilophus_citrinellus
ENSHBUG00000019672	si:ch211-212k18.5	100	76.723	ENSAOCG00000010737	si:ch211-212k18.5	100	77.697	Amphiprion_ocellaris
ENSHBUG00000019672	si:ch211-212k18.5	75	55.738	ENSAOCG00000016559	sall2	70	72.222	Amphiprion_ocellaris
ENSHBUG00000019672	si:ch211-212k18.5	100	76.480	ENSAPEG00000006751	si:ch211-212k18.5	100	77.372	Amphiprion_percula
ENSHBUG00000019672	si:ch211-212k18.5	57	48.755	ENSAPEG00000020215	sall2	87	48.199	Amphiprion_percula
ENSHBUG00000019672	si:ch211-212k18.5	81	81.818	ENSATEG00000001254	si:ch211-212k18.5	100	82.159	Anabas_testudineus
ENSHBUG00000019672	si:ch211-212k18.5	52	51.232	ENSATEG00000007303	sall2	63	72.222	Anabas_testudineus
ENSHBUG00000019672	si:ch211-212k18.5	59	55.769	ENSACLG00000019867	sall2	69	46.740	Astatotilapia_calliptera
ENSHBUG00000019672	si:ch211-212k18.5	100	99.559	ENSACLG00000009709	si:ch211-212k18.5	100	99.559	Astatotilapia_calliptera
ENSHBUG00000019672	si:ch211-212k18.5	66	50.644	ENSAMXG00000020956	sall2	61	60.870	Astyanax_mexicanus
ENSHBUG00000019672	si:ch211-212k18.5	99	55.277	ENSAMXG00000010979	si:ch211-212k18.5	99	53.987	Astyanax_mexicanus
ENSHBUG00000019672	si:ch211-212k18.5	53	61.818	ENSCSEG00000021148	sall2	52	61.818	Cynoglossus_semilaevis
ENSHBUG00000019672	si:ch211-212k18.5	99	71.159	ENSCSEG00000004426	si:ch211-212k18.5	99	70.607	Cynoglossus_semilaevis
ENSHBUG00000019672	si:ch211-212k18.5	99	72.886	ENSCVAG00000007475	si:ch211-212k18.5	99	71.522	Cyprinodon_variegatus
ENSHBUG00000019672	si:ch211-212k18.5	59	55.769	ENSCVAG00000006032	sall2	63	75.000	Cyprinodon_variegatus
ENSHBUG00000019672	si:ch211-212k18.5	99	55.708	ENSDARG00000103316	si:ch211-212k18.5	94	56.426	Danio_rerio
ENSHBUG00000019672	si:ch211-212k18.5	77	46.843	ENSDARG00000075116	sall2	69	55.556	Danio_rerio
ENSHBUG00000019672	si:ch211-212k18.5	85	49.308	ENSELUG00000004389	sall2	72	52.039	Esox_lucius
ENSHBUG00000019672	si:ch211-212k18.5	99	59.544	ENSELUG00000024534	si:ch211-212k18.5	99	58.494	Esox_lucius
ENSHBUG00000019672	si:ch211-212k18.5	99	73.328	ENSFHEG00000017264	si:ch211-212k18.5	99	72.765	Fundulus_heteroclitus
ENSHBUG00000019672	si:ch211-212k18.5	59	58.000	ENSFHEG00000017550	sall2	63	75.000	Fundulus_heteroclitus
ENSHBUG00000019672	si:ch211-212k18.5	99	72.957	ENSGAFG00000003746	si:ch211-212k18.5	99	72.167	Gambusia_affinis
ENSHBUG00000019672	si:ch211-212k18.5	58	56.863	ENSGAFG00000015194	sall2	60	47.769	Gambusia_affinis
ENSHBUG00000019672	si:ch211-212k18.5	99	62.609	ENSHCOG00000002842	si:ch211-212k18.5	99	60.778	Hippocampus_comes
ENSHBUG00000019672	si:ch211-212k18.5	99	53.705	ENSIPUG00000002559	sall2	99	50.896	Ictalurus_punctatus
ENSHBUG00000019672	si:ch211-212k18.5	99	74.545	ENSKMAG00000019657	si:ch211-212k18.5	99	72.543	Kryptolebias_marmoratus
ENSHBUG00000019672	si:ch211-212k18.5	64	47.152	ENSKMAG00000020172	sall2	64	75.000	Kryptolebias_marmoratus
ENSHBUG00000019672	si:ch211-212k18.5	99	73.684	ENSLBEG00000020887	si:ch211-212k18.5	100	71.660	Labrus_bergylta
ENSHBUG00000019672	si:ch211-212k18.5	64	47.449	ENSMAMG00000016229	sall2	51	73.529	Mastacembelus_armatus
ENSHBUG00000019672	si:ch211-212k18.5	75	85.565	ENSMAMG00000015887	si:ch211-212k18.5	99	84.848	Mastacembelus_armatus
ENSHBUG00000019672	si:ch211-212k18.5	100	99.666	ENSMZEG00005021214	si:ch211-212k18.5	100	99.666	Maylandia_zebra
ENSHBUG00000019672	si:ch211-212k18.5	75	55.769	ENSMZEG00005012103	sall2	74	44.715	Maylandia_zebra
ENSHBUG00000019672	si:ch211-212k18.5	92	81.594	ENSMMOG00000012726	si:ch211-212k18.5	100	81.257	Mola_mola
ENSHBUG00000019672	si:ch211-212k18.5	98	76.776	ENSMALG00000000979	si:ch211-212k18.5	98	75.301	Monopterus_albus
ENSHBUG00000019672	si:ch211-212k18.5	98	94.539	ENSNBRG00000023948	si:ch211-212k18.5	99	93.744	Neolamprologus_brichardi
ENSHBUG00000019672	si:ch211-212k18.5	74	44.334	ENSNBRG00000017645	sall2	76	46.395	Neolamprologus_brichardi
ENSHBUG00000019672	si:ch211-212k18.5	100	71.034	ENSORLG00000030429	si:ch211-212k18.5	99	69.925	Oryzias_latipes
ENSHBUG00000019672	si:ch211-212k18.5	100	71.012	ENSORLG00020008145	si:ch211-212k18.5	99	69.992	Oryzias_latipes_hni
ENSHBUG00000019672	si:ch211-212k18.5	100	70.776	ENSORLG00015004982	si:ch211-212k18.5	99	69.843	Oryzias_latipes_hsok
ENSHBUG00000019672	si:ch211-212k18.5	100	70.319	ENSOMEG00000013949	si:ch211-212k18.5	100	68.208	Oryzias_melastigma
ENSHBUG00000019672	si:ch211-212k18.5	76	63.830	ENSPKIG00000009207	sall2	71	66.667	Paramormyrops_kingsleyae
ENSHBUG00000019672	si:ch211-212k18.5	99	67.699	ENSPMGG00000018714	si:ch211-212k18.5	99	65.961	Periophthalmus_magnuspinnatus
ENSHBUG00000019672	si:ch211-212k18.5	99	73.409	ENSPFOG00000023705	si:ch211-212k18.5	100	72.949	Poecilia_formosa
ENSHBUG00000019672	si:ch211-212k18.5	58	59.184	ENSPFOG00000016504	sall2	62	47.897	Poecilia_formosa
ENSHBUG00000019672	si:ch211-212k18.5	100	72.868	ENSPLAG00000002577	si:ch211-212k18.5	99	72.660	Poecilia_latipinna
ENSHBUG00000019672	si:ch211-212k18.5	58	59.184	ENSPLAG00000018320	sall2	60	47.849	Poecilia_latipinna
ENSHBUG00000019672	si:ch211-212k18.5	99	73.067	ENSPMEG00000016395	si:ch211-212k18.5	100	72.862	Poecilia_mexicana
ENSHBUG00000019672	si:ch211-212k18.5	58	59.184	ENSPMEG00000006335	sall2	60	47.135	Poecilia_mexicana
ENSHBUG00000019672	si:ch211-212k18.5	100	72.759	ENSPREG00000005292	si:ch211-212k18.5	99	72.742	Poecilia_reticulata
ENSHBUG00000019672	si:ch211-212k18.5	58	59.184	ENSPREG00000021908	sall2	60	47.969	Poecilia_reticulata
ENSHBUG00000019672	si:ch211-212k18.5	96	99.724	ENSPNYG00000021576	si:ch211-212k18.5	95	99.724	Pundamilia_nyererei
ENSHBUG00000019672	si:ch211-212k18.5	99	56.303	ENSPNAG00000006123	si:ch211-212k18.5	99	54.061	Pygocentrus_nattereri
ENSHBUG00000019672	si:ch211-212k18.5	65	46.997	ENSPNAG00000021463	sall2	50	57.377	Pygocentrus_nattereri
ENSHBUG00000019672	si:ch211-212k18.5	76	50.000	ENSSMAG00000014157	sall2	70	61.224	Scophthalmus_maximus
ENSHBUG00000019672	si:ch211-212k18.5	100	74.778	ENSSMAG00000006241	si:ch211-212k18.5	100	74.134	Scophthalmus_maximus
ENSHBUG00000019672	si:ch211-212k18.5	76	55.738	ENSSDUG00000012274	sall2	71	69.444	Seriola_dumerili
ENSHBUG00000019672	si:ch211-212k18.5	100	77.957	ENSSDUG00000006164	si:ch211-212k18.5	100	77.796	Seriola_dumerili
ENSHBUG00000019672	si:ch211-212k18.5	76	55.738	ENSSLDG00000001653	sall2	71	69.444	Seriola_lalandi_dorsalis
ENSHBUG00000019672	si:ch211-212k18.5	100	80.048	ENSSLDG00000003393	si:ch211-212k18.5	100	79.726	Seriola_lalandi_dorsalis
ENSHBUG00000019672	si:ch211-212k18.5	63	48.695	ENSSPAG00000023009	sall2	70	72.222	Stegastes_partitus
ENSHBUG00000019672	si:ch211-212k18.5	99	78.888	ENSSPAG00000013435	si:ch211-212k18.5	99	79.149	Stegastes_partitus
ENSHBUG00000019672	si:ch211-212k18.5	57	60.976	ENSTRUG00000024556	sall2	61	73.529	Takifugu_rubripes
ENSHBUG00000019672	si:ch211-212k18.5	94	76.705	ENSTRUG00000025082	si:ch211-212k18.5	95	74.091	Takifugu_rubripes
ENSHBUG00000019672	si:ch211-212k18.5	99	71.790	ENSXCOG00000000762	si:ch211-212k18.5	99	71.839	Xiphophorus_couchianus
ENSHBUG00000019672	si:ch211-212k18.5	58	56.863	ENSXMAG00000000902	sall2	60	47.644	Xiphophorus_maculatus
ENSHBUG00000019672	si:ch211-212k18.5	99	73.689	ENSXMAG00000001461	si:ch211-212k18.5	99	73.317	Xiphophorus_maculatus