EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019680 (Gene tree)
Gene ID: -
Gene Symbol: u2af1
Alias: CHUNP6860|zgc:111896
Full Name: U2 small nuclear RNA auxiliary factor 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 4027 bases
Position: chrAFNZ01063774.1:223-4249
Accession: ZDB-GENE-020419-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017623	zf-CCCH	PF00642.24	1.8e-06	1	1
ENSHBUP00000017623	RRM_1	PF00076.22	7.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000026437	-	384	-	ENSHBUP00000017623	127 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000019680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019680	u2af1	100	100.000	ENSHBUG00000019658	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019680	u2af1	69	97.727	ENSG00000160201	U2AF1	57	94.792	Homo_sapiens
ENSHBUG00000019680	u2af1	69	97.727	ENSG00000275895	U2AF1L5	57	94.792	Homo_sapiens
ENSHBUG00000019680	u2af1	69	81.818	ENSG00000161265	U2AF1L4	52	79.787	Homo_sapiens
ENSHBUG00000019680	u2af1	70	96.629	ENSAPOG00000008858	-	51	94.792	Acanthochromis_polyacanthus
ENSHBUG00000019680	u2af1	76	95.833	ENSACIG00000016862	U2AF1L5	53	95.833	Amphilophus_citrinellus
ENSHBUG00000019680	u2af1	54	95.652	ENSACIG00000022868	-	79	95.652	Amphilophus_citrinellus
ENSHBUG00000019680	u2af1	73	97.849	ENSAOCG00000015950	-	52	95.699	Amphiprion_ocellaris
ENSHBUG00000019680	u2af1	70	96.629	ENSAOCG00000011990	-	51	94.792	Amphiprion_ocellaris
ENSHBUG00000019680	u2af1	73	97.849	ENSAPEG00000001266	-	52	95.699	Amphiprion_percula
ENSHBUG00000019680	u2af1	70	96.629	ENSAPEG00000015747	-	51	94.792	Amphiprion_percula
ENSHBUG00000019680	u2af1	71	87.778	ENSANAG00000012083	-	77	84.848	Aotus_nancymaae
ENSHBUG00000019680	u2af1	69	97.727	ENSCAFG00020020321	-	57	94.792	Canis_lupus_dingo
ENSHBUG00000019680	u2af1	72	97.802	ENSCAFG00020011412	-	50	97.802	Canis_lupus_dingo
ENSHBUG00000019680	u2af1	69	87.500	ENSCAFG00020018413	-	74	83.582	Canis_lupus_dingo
ENSHBUG00000019680	u2af1	69	97.727	ENSCAPG00000009172	-	58	94.792	Cavia_aperea
ENSHBUG00000019680	u2af1	69	97.727	ENSCCAG00000036938	-	57	94.792	Cebus_capucinus
ENSHBUG00000019680	u2af1	73	82.796	ENSCPBG00000001404	U2AF1L4	59	82.796	Chrysemys_picta_bellii
ENSHBUG00000019680	u2af1	69	97.727	ENSCANG00000008972	U2AF1L5	57	94.792	Colobus_angolensis_palliatus
ENSHBUG00000019680	u2af1	71	87.778	ENSCGRG00001014816	Gm49396	50	87.778	Cricetulus_griseus_chok1gshd
ENSHBUG00000019680	u2af1	69	86.364	ENSDORG00000009078	-	52	84.043	Dipodomys_ordii
ENSHBUG00000019680	u2af1	69	87.500	ENSEASG00005001205	-	74	83.582	Equus_asinus_asinus
ENSHBUG00000019680	u2af1	69	87.500	ENSECAG00000017941	U2AF1L4	74	83.582	Equus_caballus
ENSHBUG00000019680	u2af1	69	87.500	ENSFCAG00000006383	-	57	79.612	Felis_catus
ENSHBUG00000019680	u2af1	69	97.727	ENSFCAG00000003970	-	57	94.792	Felis_catus
ENSHBUG00000019680	u2af1	70	95.506	ENSFHEG00000019072	-	51	92.708	Fundulus_heteroclitus
ENSHBUG00000019680	u2af1	73	94.624	ENSGACG00000014605	-	60	94.624	Gasterosteus_aculeatus
ENSHBUG00000019680	u2af1	82	79.808	ENSGAGG00000006054	-	85	79.808	Gopherus_agassizii
ENSHBUG00000019680	u2af1	74	90.426	ENSGGOG00000025487	-	51	90.426	Gorilla_gorilla
ENSHBUG00000019680	u2af1	69	97.727	ENSGGOG00000039004	-	57	94.792	Gorilla_gorilla
ENSHBUG00000019680	u2af1	69	81.818	ENSGGOG00000016828	-	65	68.644	Gorilla_gorilla
ENSHBUG00000019680	u2af1	74	73.404	ENSSTOG00000000884	-	61	73.404	Ictidomys_tridecemlineatus
ENSHBUG00000019680	u2af1	70	87.640	ENSJJAG00000006677	-	63	75.439	Jaculus_jaculus
ENSHBUG00000019680	u2af1	76	95.833	ENSKMAG00000022082	-	61	95.833	Kryptolebias_marmoratus
ENSHBUG00000019680	u2af1	69	97.727	ENSLBEG00000000652	-	53	93.750	Labrus_bergylta
ENSHBUG00000019680	u2af1	69	97.727	ENSLBEG00000024283	-	52	93.750	Labrus_bergylta
ENSHBUG00000019680	u2af1	73	97.849	ENSLBEG00000013535	-	53	93.750	Labrus_bergylta
ENSHBUG00000019680	u2af1	69	84.091	ENSMFAG00000037807	-	52	81.915	Macaca_fascicularis
ENSHBUG00000019680	u2af1	87	72.807	ENSMMUG00000048190	-	53	72.807	Macaca_mulatta
ENSHBUG00000019680	u2af1	69	97.727	ENSMMUG00000022769	-	57	94.792	Macaca_mulatta
ENSHBUG00000019680	u2af1	87	63.793	ENSMNEG00000037977	-	52	63.793	Macaca_nemestrina
ENSHBUG00000019680	u2af1	69	86.364	ENSMLEG00000004617	-	65	72.034	Mandrillus_leucophaeus
ENSHBUG00000019680	u2af1	69	97.727	ENSMLEG00000029446	-	57	94.792	Mandrillus_leucophaeus
ENSHBUG00000019680	u2af1	70	96.629	ENSMAMG00000022001	-	62	94.792	Mastacembelus_armatus
ENSHBUG00000019680	u2af1	71	87.778	ENSMAUG00000017381	Gm49396	50	87.778	Mesocricetus_auratus
ENSHBUG00000019680	u2af1	71	87.778	ENSMOCG00000009737	U2af1l4	50	87.778	Microtus_ochrogaster
ENSHBUG00000019680	u2af1	73	96.774	ENSMALG00000007172	-	53	96.774	Monopterus_albus
ENSHBUG00000019680	u2af1	71	87.778	MGP_CAROLIEiJ_G0029529	U2af1l4	50	87.778	Mus_caroli
ENSHBUG00000019680	u2af1	71	87.778	ENSMUSG00000078765	U2af1l4	86	87.778	Mus_musculus
ENSHBUG00000019680	u2af1	71	87.778	MGP_PahariEiJ_G0012763	U2af1l4	50	87.778	Mus_pahari
ENSHBUG00000019680	u2af1	71	87.778	MGP_SPRETEiJ_G0030625	Gm49396	50	87.778	Mus_spretus
ENSHBUG00000019680	u2af1	69	97.727	ENSMPUG00000009706	-	63	94.792	Mustela_putorius_furo
ENSHBUG00000019680	u2af1	71	87.778	ENSNGAG00000015744	Gm49396	50	87.778	Nannospalax_galili
ENSHBUG00000019680	u2af1	100	92.126	ENSNBRG00000006145	-	68	92.126	Neolamprologus_brichardi
ENSHBUG00000019680	u2af1	70	96.629	ENSORLG00020014086	-	55	90.625	Oryzias_latipes_hni
ENSHBUG00000019680	u2af1	73	91.398	ENSOMEG00000019531	-	54	91.398	Oryzias_melastigma
ENSHBUG00000019680	u2af1	71	83.333	ENSPPAG00000026285	-	50	83.333	Pan_paniscus
ENSHBUG00000019680	u2af1	82	72.727	ENSPPAG00000043414	-	63	72.727	Pan_paniscus
ENSHBUG00000019680	u2af1	69	97.727	ENSPPRG00000009721	U2AF1	57	94.792	Panthera_pardus
ENSHBUG00000019680	u2af1	69	87.500	ENSPPRG00000002986	-	57	79.612	Panthera_pardus
ENSHBUG00000019680	u2af1	69	87.500	ENSPTIG00000007065	-	57	79.612	Panthera_tigris_altaica
ENSHBUG00000019680	u2af1	87	69.492	ENSPTRG00000010860	U2AF1L4	65	68.644	Pan_troglodytes
ENSHBUG00000019680	u2af1	69	96.591	ENSPKIG00000009285	u2af1	50	92.391	Paramormyrops_kingsleyae
ENSHBUG00000019680	u2af1	69	97.727	ENSPSIG00000007232	-	68	94.792	Pelodiscus_sinensis
ENSHBUG00000019680	u2af1	71	87.778	ENSPEMG00000010021	U2af1l4	50	87.778	Peromyscus_maniculatus_bairdii
ENSHBUG00000019680	u2af1	71	84.444	ENSPEMG00000013477	-	73	84.524	Peromyscus_maniculatus_bairdii
ENSHBUG00000019680	u2af1	74	82.979	ENSPCIG00000015581	-	63	85.714	Phascolarctos_cinereus
ENSHBUG00000019680	u2af1	70	95.506	ENSPLAG00000024015	-	51	92.708	Poecilia_latipinna
ENSHBUG00000019680	u2af1	70	95.506	ENSPMEG00000007991	-	51	92.708	Poecilia_mexicana
ENSHBUG00000019680	u2af1	70	95.506	ENSPREG00000012953	-	51	92.708	Poecilia_reticulata
ENSHBUG00000019680	u2af1	73	97.849	ENSPREG00000022679	-	51	97.849	Poecilia_reticulata
ENSHBUG00000019680	u2af1	70	97.753	ENSPPYG00000011463	-	56	94.792	Pongo_abelii
ENSHBUG00000019680	u2af1	87	65.766	ENSPCOG00000007736	-	63	65.766	Propithecus_coquereli
ENSHBUG00000019680	u2af1	88	97.321	ENSPNYG00000019129	-	58	97.321	Pundamilia_nyererei
ENSHBUG00000019680	u2af1	74	95.745	ENSPNAG00000021267	u2af1	54	95.745	Pygocentrus_nattereri
ENSHBUG00000019680	u2af1	87	67.544	ENSRBIG00000043188	-	64	67.544	Rhinopithecus_bieti
ENSHBUG00000019680	u2af1	87	67.544	ENSRROG00000034680	-	64	67.544	Rhinopithecus_roxellana
ENSHBUG00000019680	u2af1	69	97.727	ENSSPUG00000017707	U2AF1L5	55	94.792	Sphenodon_punctatus
ENSHBUG00000019680	u2af1	74	85.106	ENSUMAG00000020355	-	57	79.612	Ursus_maritimus
ENSHBUG00000019680	u2af1	73	97.849	ENSXMAG00000020882	-	56	72.072	Xiphophorus_maculatus