EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019785 (Gene tree)
Gene ID: 102292681
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 287095 bases
Position: chrJH425409.1:1475911-1763005
Accession: 102292681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017672	RRM_1	PF00076.22	3.4e-31	1	2
ENSHBUP00000017672	RRM_1	PF00076.22	3.4e-31	2	2
ENSHBUP00000033065	RRM_1	PF00076.22	4.1e-31	1	2
ENSHBUP00000033065	RRM_1	PF00076.22	4.1e-31	2	2
ENSHBUP00000017715	RRM_1	PF00076.22	5.6e-31	1	2
ENSHBUP00000017715	RRM_1	PF00076.22	5.6e-31	2	2
ENSHBUP00000017696	RRM_1	PF00076.22	6.3e-31	1	2
ENSHBUP00000017696	RRM_1	PF00076.22	6.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034761	-	1990	-	ENSHBUP00000017696	553 (aa)	-	-
ENSHBUT00000026534	-	1753	-	ENSHBUP00000033065	474 (aa)	-	-
ENSHBUT00000026502	-	1353	XM_005927658	ENSHBUP00000017672	450 (aa)	XP_005927720	-
ENSHBUT00000034766	-	1912	XM_005927656	ENSHBUP00000017715	527 (aa)	XP_005927718	UPI0003BDAC0D

Gene Model

Click here to download ENSHBUG00000019785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019785	-	72	60.756	ENSHBUG00000004802	rbms1a	86	62.951
ENSHBUG00000019785	-	58	85.874	ENSHBUG00000021196	rbms3	94	85.874
ENSHBUG00000019785	-	76	69.540	ENSHBUG00000004516	RBMS1	94	72.189
ENSHBUG00000019785	-	90	57.452	ENSHBUG00000005313	rbms2b	93	60.367
ENSHBUG00000019785	-	72	81.250	ENSHBUG00000023230	rbms2a	97	77.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019785	-	96	85.747	ENSG00000144642	RBMS3	100	90.152	Homo_sapiens
ENSHBUG00000019785	-	100	94.508	ENSAPOG00000003432	-	100	98.977	Acanthochromis_polyacanthus
ENSHBUG00000019785	-	96	71.069	ENSAPOG00000007266	rbms3	100	71.698	Acanthochromis_polyacanthus
ENSHBUG00000019785	-	68	85.065	ENSAMEG00000005947	RBMS3	100	85.065	Ailuropoda_melanoleuca
ENSHBUG00000019785	-	85	70.649	ENSACIG00000021113	RBMS3	95	74.795	Amphilophus_citrinellus
ENSHBUG00000019785	-	72	96.024	ENSACIG00000006987	-	88	98.131	Amphilophus_citrinellus
ENSHBUG00000019785	-	100	94.508	ENSAOCG00000024104	-	100	98.977	Amphiprion_ocellaris
ENSHBUG00000019785	-	96	78.700	ENSAOCG00000021274	rbms3	100	78.700	Amphiprion_ocellaris
ENSHBUG00000019785	-	79	79.404	ENSAPEG00000016299	rbms3	87	86.446	Amphiprion_percula
ENSHBUG00000019785	-	96	87.037	ENSAPEG00000009481	-	100	87.037	Amphiprion_percula
ENSHBUG00000019785	-	96	79.054	ENSATEG00000024295	rbms3	100	79.505	Anabas_testudineus
ENSHBUG00000019785	-	95	98.721	ENSATEG00000008433	-	100	98.721	Anabas_testudineus
ENSHBUG00000019785	-	96	85.092	ENSAPLG00000012270	RBMS3	99	83.486	Anas_platyrhynchos
ENSHBUG00000019785	-	96	84.055	ENSACAG00000028664	RBMS3	99	84.055	Anolis_carolinensis
ENSHBUG00000019785	-	96	85.747	ENSANAG00000021899	RBMS3	100	85.747	Aotus_nancymaae
ENSHBUG00000019785	-	96	78.330	ENSACLG00000018506	rbms3	95	83.871	Astatotilapia_calliptera
ENSHBUG00000019785	-	100	99.810	ENSACLG00000008976	-	100	99.810	Astatotilapia_calliptera
ENSHBUG00000019785	-	57	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSHBUG00000019785	-	96	86.636	ENSAMXG00000020388	rbms3	100	86.636	Astyanax_mexicanus
ENSHBUG00000019785	-	96	85.714	ENSBTAG00000044062	RBMS3	100	85.714	Bos_taurus
ENSHBUG00000019785	-	96	85.747	ENSCJAG00000004312	RBMS3	100	85.747	Callithrix_jacchus
ENSHBUG00000019785	-	96	85.747	ENSCAFG00000005464	RBMS3	100	85.747	Canis_familiaris
ENSHBUG00000019785	-	96	85.714	ENSCAFG00020024980	RBMS3	100	85.714	Canis_lupus_dingo
ENSHBUG00000019785	-	96	85.747	ENSCHIG00000009144	RBMS3	100	85.747	Capra_hircus
ENSHBUG00000019785	-	75	85.841	ENSTSYG00000002615	RBMS3	100	85.841	Carlito_syrichta
ENSHBUG00000019785	-	85	80.940	ENSCAPG00000017783	RBMS3	95	82.842	Cavia_aperea
ENSHBUG00000019785	-	96	86.041	ENSCPOG00000006457	RBMS3	100	86.041	Cavia_porcellus
ENSHBUG00000019785	-	96	85.747	ENSCCAG00000008671	RBMS3	100	85.747	Cebus_capucinus
ENSHBUG00000019785	-	96	85.294	ENSCATG00000013222	RBMS3	100	85.294	Cercocebus_atys
ENSHBUG00000019785	-	96	85.294	ENSCLAG00000005866	RBMS3	100	85.294	Chinchilla_lanigera
ENSHBUG00000019785	-	64	82.474	ENSCSAG00000009655	RBMS3	99	88.148	Chlorocebus_sabaeus
ENSHBUG00000019785	-	85	88.000	ENSCHOG00000000758	RBMS3	87	88.000	Choloepus_hoffmanni
ENSHBUG00000019785	-	96	84.282	ENSCPBG00000022678	RBMS3	99	84.282	Chrysemys_picta_bellii
ENSHBUG00000019785	-	96	85.520	ENSCANG00000032137	RBMS3	100	85.520	Colobus_angolensis_palliatus
ENSHBUG00000019785	-	96	84.211	ENSCGRG00001007243	Rbms3	100	84.211	Cricetulus_griseus_chok1gshd
ENSHBUG00000019785	-	96	84.211	ENSCGRG00000004599	Rbms3	100	84.211	Cricetulus_griseus_crigri
ENSHBUG00000019785	-	95	96.675	ENSCSEG00000014677	-	100	96.675	Cynoglossus_semilaevis
ENSHBUG00000019785	-	96	78.507	ENSCSEG00000010011	RBMS3	100	78.652	Cynoglossus_semilaevis
ENSHBUG00000019785	-	96	94.009	ENSCVAG00000022814	-	100	98.433	Cyprinodon_variegatus
ENSHBUG00000019785	-	96	79.545	ENSCVAG00000022354	rbms3	100	79.773	Cyprinodon_variegatus
ENSHBUG00000019785	-	96	86.175	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSHBUG00000019785	-	96	85.616	ENSDNOG00000016645	RBMS3	100	85.294	Dasypus_novemcinctus
ENSHBUG00000019785	-	96	84.615	ENSDORG00000007220	Rbms3	100	84.615	Dipodomys_ordii
ENSHBUG00000019785	-	84	83.333	ENSETEG00000009485	-	80	70.571	Echinops_telfairi
ENSHBUG00000019785	-	61	54.317	ENSEBUG00000005830	rbms3	86	55.472	Eptatretus_burgeri
ENSHBUG00000019785	-	96	84.580	ENSEASG00005006152	RBMS3	100	84.580	Equus_asinus_asinus
ENSHBUG00000019785	-	96	85.520	ENSECAG00000017871	RBMS3	100	85.520	Equus_caballus
ENSHBUG00000019785	-	87	80.402	ENSEEUG00000014337	RBMS3	100	80.402	Erinaceus_europaeus
ENSHBUG00000019785	-	86	96.997	ENSELUG00000006905	-	98	97.942	Esox_lucius
ENSHBUG00000019785	-	96	76.749	ENSELUG00000002862	rbms3	100	76.749	Esox_lucius
ENSHBUG00000019785	-	96	85.294	ENSFCAG00000002130	RBMS3	100	85.294	Felis_catus
ENSHBUG00000019785	-	96	84.510	ENSFALG00000009165	RBMS3	99	84.510	Ficedula_albicollis
ENSHBUG00000019785	-	96	84.842	ENSFDAG00000008278	RBMS3	100	84.842	Fukomys_damarensis
ENSHBUG00000019785	-	92	66.353	ENSFHEG00000004787	RBMS3	94	75.749	Fundulus_heteroclitus
ENSHBUG00000019785	-	87	88.665	ENSGMOG00000002600	-	96	89.169	Gadus_morhua
ENSHBUG00000019785	-	96	84.510	ENSGALG00000011439	RBMS3	99	84.510	Gallus_gallus
ENSHBUG00000019785	-	96	79.138	ENSGAFG00000000168	rbms3	100	79.365	Gambusia_affinis
ENSHBUG00000019785	-	96	94.240	ENSGAFG00000003329	-	100	98.404	Gambusia_affinis
ENSHBUG00000019785	-	64	81.443	ENSGAGG00000004039	RBMS3	99	87.085	Gopherus_agassizii
ENSHBUG00000019785	-	96	85.747	ENSGGOG00000007228	RBMS3	100	85.747	Gorilla_gorilla
ENSHBUG00000019785	-	96	85.294	ENSHGLG00000002170	RBMS3	100	85.294	Heterocephalus_glaber_female
ENSHBUG00000019785	-	96	85.294	ENSHGLG00100014278	RBMS3	100	85.294	Heterocephalus_glaber_male
ENSHBUG00000019785	-	96	92.841	ENSHCOG00000007894	-	98	96.939	Hippocampus_comes
ENSHBUG00000019785	-	96	86.636	ENSIPUG00000017680	rbms3	100	86.636	Ictalurus_punctatus
ENSHBUG00000019785	-	96	85.747	ENSSTOG00000006324	RBMS3	100	85.747	Ictidomys_tridecemlineatus
ENSHBUG00000019785	-	96	82.127	ENSJJAG00000014708	Rbms3	100	82.353	Jaculus_jaculus
ENSHBUG00000019785	-	95	98.210	ENSKMAG00000012586	-	100	98.210	Kryptolebias_marmoratus
ENSHBUG00000019785	-	96	77.852	ENSKMAG00000020500	rbms3	100	77.852	Kryptolebias_marmoratus
ENSHBUG00000019785	-	95	97.187	ENSLBEG00000027388	-	98	97.067	Labrus_bergylta
ENSHBUG00000019785	-	59	69.751	ENSLBEG00000006677	rbms3	97	74.242	Labrus_bergylta
ENSHBUG00000019785	-	96	86.301	ENSLACG00000010581	RBMS3	100	86.301	Latimeria_chalumnae
ENSHBUG00000019785	-	68	85.437	ENSLOCG00000002328	rbms3	99	91.003	Lepisosteus_oculatus
ENSHBUG00000019785	-	96	85.488	ENSLAFG00000000354	RBMS3	100	85.488	Loxodonta_africana
ENSHBUG00000019785	-	96	85.520	ENSMFAG00000033300	RBMS3	100	85.520	Macaca_fascicularis
ENSHBUG00000019785	-	96	84.580	ENSMMUG00000004404	RBMS3	100	84.580	Macaca_mulatta
ENSHBUG00000019785	-	96	85.520	ENSMNEG00000035839	RBMS3	100	85.520	Macaca_nemestrina
ENSHBUG00000019785	-	96	85.294	ENSMLEG00000029464	RBMS3	100	85.294	Mandrillus_leucophaeus
ENSHBUG00000019785	-	95	98.210	ENSMAMG00000002176	-	100	98.210	Mastacembelus_armatus
ENSHBUG00000019785	-	96	79.326	ENSMAMG00000024043	rbms3	100	80.449	Mastacembelus_armatus
ENSHBUG00000019785	-	96	78.330	ENSMZEG00005006308	rbms3	100	78.781	Maylandia_zebra
ENSHBUG00000019785	-	100	99.810	ENSMZEG00005026469	-	100	99.810	Maylandia_zebra
ENSHBUG00000019785	-	96	84.211	ENSMAUG00000016436	Rbms3	100	84.211	Mesocricetus_auratus
ENSHBUG00000019785	-	96	85.973	ENSMICG00000049249	RBMS3	100	85.973	Microcebus_murinus
ENSHBUG00000019785	-	96	83.982	ENSMOCG00000006997	Rbms3	100	83.982	Microtus_ochrogaster
ENSHBUG00000019785	-	79	79.837	ENSMMOG00000008471	RBMS3	89	87.234	Mola_mola
ENSHBUG00000019785	-	96	92.610	ENSMMOG00000015071	-	100	92.610	Mola_mola
ENSHBUG00000019785	-	96	80.931	ENSMODG00000015125	RBMS3	99	80.044	Monodelphis_domestica
ENSHBUG00000019785	-	96	78.876	ENSMALG00000019536	RBMS3	100	77.252	Monopterus_albus
ENSHBUG00000019785	-	95	97.954	ENSMALG00000009155	-	100	93.764	Monopterus_albus
ENSHBUG00000019785	-	96	83.295	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSHBUG00000019785	-	96	83.982	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSHBUG00000019785	-	96	83.790	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSHBUG00000019785	-	96	83.982	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSHBUG00000019785	-	96	85.714	ENSMPUG00000011956	RBMS3	100	85.714	Mustela_putorius_furo
ENSHBUG00000019785	-	96	84.545	ENSMLUG00000000659	RBMS3	100	84.545	Myotis_lucifugus
ENSHBUG00000019785	-	96	85.812	ENSNGAG00000014039	Rbms3	100	85.812	Nannospalax_galili
ENSHBUG00000019785	-	96	95.592	ENSNBRG00000018065	-	98	96.806	Neolamprologus_brichardi
ENSHBUG00000019785	-	96	85.747	ENSNLEG00000004129	RBMS3	100	85.747	Nomascus_leucogenys
ENSHBUG00000019785	-	96	77.854	ENSMEUG00000004772	RBMS3	99	77.854	Notamacropus_eugenii
ENSHBUG00000019785	-	96	85.845	ENSOPRG00000006808	RBMS3	85	85.845	Ochotona_princeps
ENSHBUG00000019785	-	96	85.747	ENSODEG00000003651	RBMS3	100	85.747	Octodon_degus
ENSHBUG00000019785	-	96	73.636	ENSONIG00000007172	rbms3	100	74.091	Oreochromis_niloticus
ENSHBUG00000019785	-	96	85.000	ENSOANG00000010529	RBMS3	99	85.000	Ornithorhynchus_anatinus
ENSHBUG00000019785	-	96	85.068	ENSOCUG00000004840	RBMS3	100	85.068	Oryctolagus_cuniculus
ENSHBUG00000019785	-	95	97.067	ENSORLG00000002306	-	100	97.067	Oryzias_latipes
ENSHBUG00000019785	-	96	77.551	ENSORLG00000005370	RBMS3	100	77.551	Oryzias_latipes
ENSHBUG00000019785	-	96	77.324	ENSORLG00020022674	RBMS3	100	77.324	Oryzias_latipes_hni
ENSHBUG00000019785	-	95	97.333	ENSORLG00020008496	-	100	97.333	Oryzias_latipes_hni
ENSHBUG00000019785	-	96	77.778	ENSORLG00015005509	rbms3	100	77.778	Oryzias_latipes_hsok
ENSHBUG00000019785	-	96	93.303	ENSORLG00015015719	-	100	93.303	Oryzias_latipes_hsok
ENSHBUG00000019785	-	96	78.231	ENSOMEG00000014805	RBMS3	100	78.005	Oryzias_melastigma
ENSHBUG00000019785	-	95	97.187	ENSOMEG00000007677	-	100	97.187	Oryzias_melastigma
ENSHBUG00000019785	-	96	85.294	ENSOARG00000014684	RBMS3	100	85.294	Ovis_aries
ENSHBUG00000019785	-	96	85.747	ENSPPAG00000036519	RBMS3	100	85.747	Pan_paniscus
ENSHBUG00000019785	-	96	85.068	ENSPPRG00000002761	RBMS3	100	85.068	Panthera_pardus
ENSHBUG00000019785	-	96	85.068	ENSPTIG00000011568	RBMS3	100	85.068	Panthera_tigris_altaica
ENSHBUG00000019785	-	96	85.747	ENSPTRG00000014709	RBMS3	100	85.747	Pan_troglodytes
ENSHBUG00000019785	-	96	85.294	ENSPANG00000010234	RBMS3	100	81.898	Papio_anubis
ENSHBUG00000019785	-	57	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSHBUG00000019785	-	96	83.827	ENSPSIG00000005269	RBMS3	99	83.827	Pelodiscus_sinensis
ENSHBUG00000019785	-	79	79.452	ENSPMGG00000021544	rbms3	86	85.542	Periophthalmus_magnuspinnatus
ENSHBUG00000019785	-	88	93.467	ENSPMGG00000021683	-	100	97.906	Periophthalmus_magnuspinnatus
ENSHBUG00000019785	-	96	81.713	ENSPEMG00000001117	Rbms3	99	81.713	Peromyscus_maniculatus_bairdii
ENSHBUG00000019785	-	76	89.205	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSHBUG00000019785	-	96	79.592	ENSPFOG00000017887	rbms3	100	79.819	Poecilia_formosa
ENSHBUG00000019785	-	75	76.833	ENSPLAG00000016866	-	82	81.308	Poecilia_latipinna
ENSHBUG00000019785	-	96	94.240	ENSPMEG00000002993	-	100	98.670	Poecilia_mexicana
ENSHBUG00000019785	-	100	89.036	ENSPREG00000018221	-	97	97.222	Poecilia_reticulata
ENSHBUG00000019785	-	96	78.082	ENSPREG00000011880	rbms3	99	78.311	Poecilia_reticulata
ENSHBUG00000019785	-	96	72.851	ENSPPYG00000014050	RBMS3	83	73.077	Pongo_abelii
ENSHBUG00000019785	-	96	65.760	ENSPCAG00000006307	RBMS3	100	65.760	Procavia_capensis
ENSHBUG00000019785	-	96	86.301	ENSPCOG00000017136	RBMS3	99	86.301	Propithecus_coquereli
ENSHBUG00000019785	-	87	88.000	ENSPVAG00000014037	RBMS3	100	76.697	Pteropus_vampyrus
ENSHBUG00000019785	-	100	95.614	ENSPNYG00000012624	-	100	99.798	Pundamilia_nyererei
ENSHBUG00000019785	-	96	78.104	ENSPNYG00000010546	rbms3	100	78.555	Pundamilia_nyererei
ENSHBUG00000019785	-	96	86.636	ENSPNAG00000001800	rbms3	100	86.636	Pygocentrus_nattereri
ENSHBUG00000019785	-	96	84.174	ENSRNOG00000025881	Rbms3	100	84.174	Rattus_norvegicus
ENSHBUG00000019785	-	96	85.294	ENSRBIG00000035863	RBMS3	100	85.294	Rhinopithecus_bieti
ENSHBUG00000019785	-	86	86.856	ENSRROG00000027512	RBMS3	95	85.823	Rhinopithecus_roxellana
ENSHBUG00000019785	-	96	85.747	ENSSBOG00000020232	RBMS3	100	85.747	Saimiri_boliviensis_boliviensis
ENSHBUG00000019785	-	85	78.756	ENSSHAG00000002411	RBMS3	95	81.501	Sarcophilus_harrisii
ENSHBUG00000019785	-	96	90.300	ENSSFOG00015008578	rbms3	98	94.133	Scleropages_formosus
ENSHBUG00000019785	-	96	75.785	ENSSMAG00000004997	rbms3	99	83.333	Scophthalmus_maximus
ENSHBUG00000019785	-	93	89.260	ENSSMAG00000020065	-	97	92.935	Scophthalmus_maximus
ENSHBUG00000019785	-	96	79.101	ENSSDUG00000013656	RBMS3	100	79.551	Seriola_dumerili
ENSHBUG00000019785	-	95	98.977	ENSSDUG00000019287	-	100	94.688	Seriola_dumerili
ENSHBUG00000019785	-	95	98.977	ENSSLDG00000013224	-	100	94.688	Seriola_lalandi_dorsalis
ENSHBUG00000019785	-	96	78.795	ENSSLDG00000020276	RBMS3	100	79.241	Seriola_lalandi_dorsalis
ENSHBUG00000019785	-	76	76.163	ENSSARG00000000695	RBMS3	94	75.214	Sorex_araneus
ENSHBUG00000019785	-	69	81.410	ENSSPUG00000017197	RBMS3	97	85.185	Sphenodon_punctatus
ENSHBUG00000019785	-	96	78.475	ENSSPAG00000020693	rbms3	100	78.924	Stegastes_partitus
ENSHBUG00000019785	-	95	98.977	ENSSPAG00000003983	-	100	98.977	Stegastes_partitus
ENSHBUG00000019785	-	96	85.294	ENSSSCG00000036381	RBMS3	100	85.294	Sus_scrofa
ENSHBUG00000019785	-	75	84.320	ENSTGUG00000003572	RBMS3	100	84.320	Taeniopygia_guttata
ENSHBUG00000019785	-	96	77.303	ENSTRUG00000021719	RBMS3	100	77.303	Takifugu_rubripes
ENSHBUG00000019785	-	96	81.963	ENSTRUG00000007482	-	100	82.110	Takifugu_rubripes
ENSHBUG00000019785	-	76	88.047	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSHBUG00000019785	-	96	85.388	ENSTTRG00000006202	RBMS3	99	85.388	Tursiops_truncatus
ENSHBUG00000019785	-	96	85.747	ENSUMAG00000000263	RBMS3	100	85.747	Ursus_maritimus
ENSHBUG00000019785	-	86	77.062	ENSVPAG00000003842	RBMS3	95	76.203	Vicugna_pacos
ENSHBUG00000019785	-	85	87.339	ENSVVUG00000004660	RBMS3	94	92.627	Vulpes_vulpes
ENSHBUG00000019785	-	69	82.315	ENSXETG00000032055	RBMS3	99	82.315	Xenopus_tropicalis
ENSHBUG00000019785	-	88	80.451	ENSXCOG00000019600	-	100	82.776	Xiphophorus_couchianus
ENSHBUG00000019785	-	96	77.376	ENSXMAG00000021783	rbms3	100	77.602	Xiphophorus_maculatus
ENSHBUG00000019785	-	96	94.470	ENSXMAG00000014382	-	100	94.470	Xiphophorus_maculatus