EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019800 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 1686 bases
Position: chrJH428595.1:1486-3171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017725	zf-C2H2	PF00096.26	7.4e-38	1	6
ENSHBUP00000017725	zf-C2H2	PF00096.26	7.4e-38	2	6
ENSHBUP00000017725	zf-C2H2	PF00096.26	7.4e-38	3	6
ENSHBUP00000017725	zf-C2H2	PF00096.26	7.4e-38	4	6
ENSHBUP00000017725	zf-C2H2	PF00096.26	7.4e-38	5	6
ENSHBUP00000017725	zf-C2H2	PF00096.26	7.4e-38	6	6
ENSHBUP00000017725	zf-met	PF12874.7	6.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000026579	-	741	-	ENSHBUP00000017725	246 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000019800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019800	-	89	50.000	ENSHBUG00000012230	-	69	48.193
ENSHBUG00000019800	-	98	50.000	ENSHBUG00000003057	-	87	50.000
ENSHBUG00000019800	-	93	46.429	ENSHBUG00000001075	-	93	46.429
ENSHBUG00000019800	-	89	41.212	ENSHBUG00000016927	-	60	41.212
ENSHBUG00000019800	-	93	44.053	ENSHBUG00000005809	-	98	44.172
ENSHBUG00000019800	-	90	46.429	ENSHBUG00000020544	-	87	46.429
ENSHBUG00000019800	-	87	41.176	ENSHBUG00000002320	-	61	41.176
ENSHBUG00000019800	-	93	48.649	ENSHBUG00000013194	-	76	48.649
ENSHBUG00000019800	-	88	46.602	ENSHBUG00000021970	-	79	46.602
ENSHBUG00000019800	-	94	39.189	ENSHBUG00000006656	-	63	39.189
ENSHBUG00000019800	-	96	43.373	ENSHBUG00000016546	-	64	43.290
ENSHBUG00000019800	-	92	47.879	ENSHBUG00000009941	-	58	47.879
ENSHBUG00000019800	-	93	48.551	ENSHBUG00000012007	-	72	48.551
ENSHBUG00000019800	-	96	33.333	ENSHBUG00000013093	si:dkey-89b17.4	68	32.258
ENSHBUG00000019800	-	88	42.105	ENSHBUG00000016334	-	50	42.105
ENSHBUG00000019800	-	94	39.070	ENSHBUG00000005848	-	88	39.070
ENSHBUG00000019800	-	96	46.809	ENSHBUG00000011194	-	79	46.809
ENSHBUG00000019800	-	91	39.450	ENSHBUG00000017542	znf526	50	39.450
ENSHBUG00000019800	-	92	50.000	ENSHBUG00000022073	-	50	50.000
ENSHBUG00000019800	-	83	50.000	ENSHBUG00000013065	-	51	50.000
ENSHBUG00000019800	-	91	35.047	ENSHBUG00000009720	-	60	35.047
ENSHBUG00000019800	-	91	43.182	ENSHBUG00000012432	-	69	43.182
ENSHBUG00000019800	-	85	50.000	ENSHBUG00000002889	-	60	50.000
ENSHBUG00000019800	-	93	45.714	ENSHBUG00000009837	znf236	58	45.714
ENSHBUG00000019800	-	90	50.467	ENSHBUG00000018916	-	63	50.467
ENSHBUG00000019800	-	96	48.416	ENSHBUG00000004718	-	85	50.952
ENSHBUG00000019800	-	93	40.984	ENSHBUG00000004840	znf646	73	40.984
ENSHBUG00000019800	-	89	50.292	ENSHBUG00000013542	-	60	50.292
ENSHBUG00000019800	-	88	41.905	ENSHBUG00000015393	-	77	41.905
ENSHBUG00000019800	-	90	45.912	ENSHBUG00000013467	-	50	45.912
ENSHBUG00000019800	-	85	50.000	ENSHBUG00000003529	-	78	50.000
ENSHBUG00000019800	-	90	48.521	ENSHBUG00000011725	-	65	48.521
ENSHBUG00000019800	-	95	44.149	ENSHBUG00000002307	-	68	43.781
ENSHBUG00000019800	-	89	44.500	ENSHBUG00000023375	prdm5	76	44.500
ENSHBUG00000019800	-	93	50.262	ENSHBUG00000000146	-	78	50.262
ENSHBUG00000019800	-	97	43.318	ENSHBUG00000006250	-	88	43.318
ENSHBUG00000019800	-	88	50.521	ENSHBUG00000006984	-	95	50.521
ENSHBUG00000019800	-	94	40.271	ENSHBUG00000004217	-	61	41.398
ENSHBUG00000019800	-	98	45.604	ENSHBUG00000013264	-	86	45.604
ENSHBUG00000019800	-	91	52.778	ENSHBUG00000021906	-	62	52.778
ENSHBUG00000019800	-	91	47.907	ENSHBUG00000015719	-	92	47.907
ENSHBUG00000019800	-	93	47.090	ENSHBUG00000002530	-	55	47.090
ENSHBUG00000019800	-	98	39.726	ENSHBUG00000008502	-	83	41.525
ENSHBUG00000019800	-	91	45.026	ENSHBUG00000009274	-	93	45.026
ENSHBUG00000019800	-	90	47.253	ENSHBUG00000007316	-	73	47.253
ENSHBUG00000019800	-	95	49.763	ENSHBUG00000002393	-	56	49.763
ENSHBUG00000019800	-	91	45.912	ENSHBUG00000021028	-	80	46.552
ENSHBUG00000019800	-	92	43.820	ENSHBUG00000017924	-	51	43.820
ENSHBUG00000019800	-	90	45.070	ENSHBUG00000013518	-	83	45.070
ENSHBUG00000019800	-	88	47.805	ENSHBUG00000003165	-	62	47.805
ENSHBUG00000019800	-	92	45.794	ENSHBUG00000015404	-	68	45.794
ENSHBUG00000019800	-	92	45.856	ENSHBUG00000003449	-	91	45.856
ENSHBUG00000019800	-	99	50.365	ENSHBUG00000006662	-	69	50.365
ENSHBUG00000019800	-	95	46.296	ENSHBUG00000002878	-	55	46.951
ENSHBUG00000019800	-	86	52.336	ENSHBUG00000002541	-	80	52.336
ENSHBUG00000019800	-	93	42.152	ENSHBUG00000016384	-	86	42.152
ENSHBUG00000019800	-	91	35.583	ENSHBUG00000012828	znf341	52	35.583
ENSHBUG00000019800	-	90	49.738	ENSHBUG00000012984	-	73	49.738
ENSHBUG00000019800	-	94	53.509	ENSHBUG00000012215	-	92	52.991
ENSHBUG00000019800	-	91	50.303	ENSHBUG00000000820	-	93	50.303
ENSHBUG00000019800	-	90	49.533	ENSHBUG00000012758	-	90	50.820
ENSHBUG00000019800	-	91	44.872	ENSHBUG00000019377	-	61	44.872
ENSHBUG00000019800	-	96	41.216	ENSHBUG00000000731	-	55	39.796
ENSHBUG00000019800	-	95	37.436	ENSHBUG00000014494	-	70	39.286
ENSHBUG00000019800	-	88	48.718	ENSHBUG00000020527	-	84	48.718
ENSHBUG00000019800	-	92	50.000	ENSHBUG00000002526	-	63	50.000
ENSHBUG00000019800	-	91	49.405	ENSHBUG00000000099	-	89	49.405
ENSHBUG00000019800	-	88	42.336	ENSHBUG00000018885	-	57	42.336
ENSHBUG00000019800	-	92	44.762	ENSHBUG00000004077	-	97	44.762
ENSHBUG00000019800	-	95	35.294	ENSHBUG00000018577	PRDM15	50	35.294
ENSHBUG00000019800	-	89	47.458	ENSHBUG00000017251	-	98	47.458
ENSHBUG00000019800	-	90	52.083	ENSHBUG00000021003	-	93	52.083
ENSHBUG00000019800	-	91	47.879	ENSHBUG00000006863	-	89	47.879
ENSHBUG00000019800	-	93	47.196	ENSHBUG00000015166	-	89	47.196
ENSHBUG00000019800	-	86	37.879	ENSHBUG00000007764	snai2	66	37.879
ENSHBUG00000019800	-	99	44.595	ENSHBUG00000014725	-	91	44.595
ENSHBUG00000019800	-	94	51.562	ENSHBUG00000020071	-	53	51.562
ENSHBUG00000019800	-	85	39.286	ENSHBUG00000005451	gfi1b	52	39.286
ENSHBUG00000019800	-	91	43.421	ENSHBUG00000013296	-	97	43.421
ENSHBUG00000019800	-	89	51.075	ENSHBUG00000015942	-	95	49.194
ENSHBUG00000019800	-	87	35.374	ENSHBUG00000005726	-	56	35.374
ENSHBUG00000019800	-	91	48.947	ENSHBUG00000013490	-	74	48.947
ENSHBUG00000019800	-	92	43.017	ENSHBUG00000006238	-	93	43.017
ENSHBUG00000019800	-	85	47.853	ENSHBUG00000022063	-	64	47.853
ENSHBUG00000019800	-	89	48.990	ENSHBUG00000007068	-	58	48.990
ENSHBUG00000019800	-	91	46.352	ENSHBUG00000002961	-	95	46.352
ENSHBUG00000019800	-	86	36.806	ENSHBUG00000016621	scrt1b	51	36.806
ENSHBUG00000019800	-	85	50.000	ENSHBUG00000002533	-	50	50.000
ENSHBUG00000019800	-	88	47.368	ENSHBUG00000023209	-	92	47.368
ENSHBUG00000019800	-	89	36.232	ENSHBUG00000009815	znf319b	83	36.232
ENSHBUG00000019800	-	92	40.789	ENSHBUG00000002841	-	73	40.789
ENSHBUG00000019800	-	95	51.163	ENSHBUG00000012565	-	90	51.163
ENSHBUG00000019800	-	88	49.495	ENSHBUG00000017864	-	89	49.495
ENSHBUG00000019800	-	90	49.738	ENSHBUG00000017869	-	72	49.738
ENSHBUG00000019800	-	85	43.627	ENSHBUG00000009953	-	58	43.627
ENSHBUG00000019800	-	92	50.000	ENSHBUG00000015803	-	97	49.398
ENSHBUG00000019800	-	90	35.971	ENSHBUG00000012492	scrt2	51	35.971
ENSHBUG00000019800	-	85	50.526	ENSHBUG00000013292	-	65	50.526
ENSHBUG00000019800	-	88	52.410	ENSHBUG00000017372	-	87	52.410
ENSHBUG00000019800	-	89	38.532	ENSHBUG00000019090	ZNF319	87	38.532
ENSHBUG00000019800	-	92	46.409	ENSHBUG00000011944	-	64	44.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019800	-	93	54.264	ENSACIG00000011153	-	72	47.093	Amphilophus_citrinellus
ENSHBUG00000019800	-	94	50.617	ENSACIG00000019791	-	92	51.402	Amphilophus_citrinellus
ENSHBUG00000019800	-	96	48.252	ENSANAG00000032414	-	84	48.252	Aotus_nancymaae
ENSHBUG00000019800	-	94	46.000	ENSACLG00000014167	-	64	46.000	Astatotilapia_calliptera
ENSHBUG00000019800	-	98	44.595	ENSACLG00000022499	-	94	44.595	Astatotilapia_calliptera
ENSHBUG00000019800	-	89	46.847	ENSACLG00000017329	-	80	46.847	Astatotilapia_calliptera
ENSHBUG00000019800	-	89	49.718	ENSACLG00000001507	-	78	49.718	Astatotilapia_calliptera
ENSHBUG00000019800	-	91	47.059	ENSACLG00000020474	-	83	47.059	Astatotilapia_calliptera
ENSHBUG00000019800	-	94	48.684	ENSAMXG00000039770	-	83	49.302	Astyanax_mexicanus
ENSHBUG00000019800	-	93	50.431	ENSAMXG00000036849	-	90	50.431	Astyanax_mexicanus
ENSHBUG00000019800	-	98	50.000	ENSAMXG00000039162	-	95	50.000	Astyanax_mexicanus
ENSHBUG00000019800	-	92	50.901	ENSAMXG00000038324	-	76	50.901	Astyanax_mexicanus
ENSHBUG00000019800	-	93	52.604	ENSAMXG00000010078	-	87	52.604	Astyanax_mexicanus
ENSHBUG00000019800	-	92	52.778	ENSAMXG00000031501	-	88	52.778	Astyanax_mexicanus
ENSHBUG00000019800	-	98	52.727	ENSAMXG00000031646	-	96	52.727	Astyanax_mexicanus
ENSHBUG00000019800	-	94	50.213	ENSAMXG00000031844	-	92	50.213	Astyanax_mexicanus
ENSHBUG00000019800	-	96	45.495	ENSCHIG00000015741	-	86	45.495	Capra_hircus
ENSHBUG00000019800	-	97	47.706	ENSCCAG00000035188	-	87	47.706	Cebus_capucinus
ENSHBUG00000019800	-	91	51.304	ENSCPBG00000001258	-	99	48.235	Chrysemys_picta_bellii
ENSHBUG00000019800	-	99	50.602	ENSDNOG00000048084	-	99	50.602	Dasypus_novemcinctus
ENSHBUG00000019800	-	94	41.262	ENSETEG00000002865	-	85	41.262	Echinops_telfairi
ENSHBUG00000019800	-	96	50.323	ENSEBUG00000008157	-	98	50.323	Eptatretus_burgeri
ENSHBUG00000019800	-	90	53.614	ENSEBUG00000012748	-	68	53.614	Eptatretus_burgeri
ENSHBUG00000019800	-	93	41.892	ENSEBUG00000011582	-	73	41.892	Eptatretus_burgeri
ENSHBUG00000019800	-	94	49.123	ENSEBUG00000011479	-	68	49.123	Eptatretus_burgeri
ENSHBUG00000019800	-	95	45.503	ENSECAG00000035557	-	72	45.503	Equus_caballus
ENSHBUG00000019800	-	93	43.976	ENSFHEG00000016184	-	77	43.976	Fundulus_heteroclitus
ENSHBUG00000019800	-	92	49.767	ENSGMOG00000004315	-	95	49.767	Gadus_morhua
ENSHBUG00000019800	-	96	41.748	ENSGACG00000019863	-	98	41.748	Gasterosteus_aculeatus
ENSHBUG00000019800	-	91	54.110	ENSGAGG00000013851	-	66	54.110	Gopherus_agassizii
ENSHBUG00000019800	-	96	50.222	ENSGAGG00000007230	-	95	50.222	Gopherus_agassizii
ENSHBUG00000019800	-	96	50.581	ENSHGLG00000018394	-	96	50.581	Heterocephalus_glaber_female
ENSHBUG00000019800	-	99	48.969	ENSIPUG00000015233	-	61	48.969	Ictalurus_punctatus
ENSHBUG00000019800	-	92	50.725	ENSIPUG00000021472	-	90	50.725	Ictalurus_punctatus
ENSHBUG00000019800	-	94	45.665	ENSIPUG00000006936	-	79	45.665	Ictalurus_punctatus
ENSHBUG00000019800	-	92	50.521	ENSIPUG00000011073	-	97	50.521	Ictalurus_punctatus
ENSHBUG00000019800	-	93	50.495	ENSIPUG00000013065	-	98	49.065	Ictalurus_punctatus
ENSHBUG00000019800	-	94	48.529	ENSIPUG00000021484	-	98	48.529	Ictalurus_punctatus
ENSHBUG00000019800	-	94	50.806	ENSIPUG00000022751	-	96	50.254	Ictalurus_punctatus
ENSHBUG00000019800	-	95	49.345	ENSIPUG00000021434	-	99	49.345	Ictalurus_punctatus
ENSHBUG00000019800	-	93	48.252	ENSIPUG00000021527	-	91	48.252	Ictalurus_punctatus
ENSHBUG00000019800	-	94	54.118	ENSIPUG00000009750	-	78	54.118	Ictalurus_punctatus
ENSHBUG00000019800	-	95	47.867	ENSIPUG00000021518	-	88	47.685	Ictalurus_punctatus
ENSHBUG00000019800	-	93	50.588	ENSIPUG00000001941	-	83	50.588	Ictalurus_punctatus
ENSHBUG00000019800	-	95	49.029	ENSIPUG00000003960	-	86	49.029	Ictalurus_punctatus
ENSHBUG00000019800	-	95	51.000	ENSSTOG00000034297	-	67	51.000	Ictidomys_tridecemlineatus
ENSHBUG00000019800	-	97	49.302	ENSMFAG00000046052	-	88	49.302	Macaca_fascicularis
ENSHBUG00000019800	-	97	49.302	ENSMNEG00000041636	-	88	49.302	Macaca_nemestrina
ENSHBUG00000019800	-	97	49.302	ENSMLEG00000032640	-	88	49.302	Mandrillus_leucophaeus
ENSHBUG00000019800	-	93	44.796	ENSMAMG00000009051	-	96	43.850	Mastacembelus_armatus
ENSHBUG00000019800	-	94	46.364	ENSMZEG00005027285	-	82	47.442	Maylandia_zebra
ENSHBUG00000019800	-	95	47.337	ENSMZEG00005019982	-	95	47.337	Maylandia_zebra
ENSHBUG00000019800	-	89	45.833	ENSMZEG00005020736	-	89	45.833	Maylandia_zebra
ENSHBUG00000019800	-	93	42.991	ENSMZEG00005027950	-	91	42.991	Maylandia_zebra
ENSHBUG00000019800	-	89	49.029	ENSMZEG00005021421	-	95	49.029	Maylandia_zebra
ENSHBUG00000019800	-	91	45.506	ENSMZEG00005012737	-	81	45.506	Maylandia_zebra
ENSHBUG00000019800	-	91	55.000	ENSMALG00000004413	-	93	55.000	Monopterus_albus
ENSHBUG00000019800	-	94	45.810	ENSNBRG00000016603	-	88	45.810	Neolamprologus_brichardi
ENSHBUG00000019800	-	93	47.500	ENSNBRG00000015652	-	88	47.500	Neolamprologus_brichardi
ENSHBUG00000019800	-	94	50.299	ENSNBRG00000015873	-	95	47.980	Neolamprologus_brichardi
ENSHBUG00000019800	-	96	47.953	ENSNBRG00000016582	-	94	47.953	Neolamprologus_brichardi
ENSHBUG00000019800	-	85	53.416	ENSNBRG00000013604	-	69	53.416	Neolamprologus_brichardi
ENSHBUG00000019800	-	94	45.946	ENSONIG00000015166	-	100	45.946	Oreochromis_niloticus
ENSHBUG00000019800	-	91	43.114	ENSONIG00000000122	-	99	43.114	Oreochromis_niloticus
ENSHBUG00000019800	-	91	41.885	ENSONIG00000007931	-	87	41.885	Oreochromis_niloticus
ENSHBUG00000019800	-	92	45.946	ENSONIG00000020516	-	94	45.946	Oreochromis_niloticus
ENSHBUG00000019800	-	97	43.147	ENSONIG00000001834	-	99	43.147	Oreochromis_niloticus
ENSHBUG00000019800	-	91	44.853	ENSONIG00000008953	-	97	43.455	Oreochromis_niloticus
ENSHBUG00000019800	-	90	44.382	ENSONIG00000000093	-	99	44.382	Oreochromis_niloticus
ENSHBUG00000019800	-	86	49.479	ENSONIG00000021124	-	99	49.479	Oreochromis_niloticus
ENSHBUG00000019800	-	95	45.411	ENSORLG00015012951	-	79	45.411	Oryzias_latipes_hsok
ENSHBUG00000019800	-	97	50.732	ENSOGAG00000025289	-	84	50.732	Otolemur_garnettii
ENSHBUG00000019800	-	97	49.302	ENSPANG00000030978	-	92	49.302	Papio_anubis
ENSHBUG00000019800	-	98	42.079	ENSPEMG00000016975	Zfp940	72	42.424	Peromyscus_maniculatus_bairdii
ENSHBUG00000019800	-	94	48.472	ENSPMEG00000004595	-	91	47.368	Poecilia_mexicana
ENSHBUG00000019800	-	95	51.092	ENSPPYG00000009906	-	70	51.092	Pongo_abelii
ENSHBUG00000019800	-	89	43.961	ENSPNYG00000024244	-	88	43.961	Pundamilia_nyererei
ENSHBUG00000019800	-	94	50.000	ENSPNAG00000019338	-	96	50.000	Pygocentrus_nattereri
ENSHBUG00000019800	-	93	49.500	ENSPNAG00000011625	-	86	49.500	Pygocentrus_nattereri
ENSHBUG00000019800	-	97	49.767	ENSSBOG00000029728	-	88	49.767	Saimiri_boliviensis_boliviensis
ENSHBUG00000019800	-	94	55.882	ENSSPUG00000010059	-	86	55.882	Sphenodon_punctatus