EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000019903 (Gene tree)
Gene ID: 102310120
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 14959 bases
Position: chrJH425383.1:1749017-1763975
Accession: 102310120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017842	Nucleoplasmin	PF03066.15	2.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000026872	-	1624	XM_005924080	ENSHBUP00000017842	313 (aa)	XP_005924142	-

Gene Model

Click here to download ENSHBUG00000019903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019903	npm1b	95	84.281	ENSAPOG00000004268	npm1b	100	81.271	Acanthochromis_polyacanthus
ENSHBUG00000019903	npm1b	95	81.271	ENSAOCG00000012549	npm1b	100	78.595	Amphiprion_ocellaris
ENSHBUG00000019903	npm1b	95	80.268	ENSAPEG00000000868	npm1b	100	77.592	Amphiprion_percula
ENSHBUG00000019903	npm1b	95	83.278	ENSATEG00000006254	npm1b	100	83.278	Anabas_testudineus
ENSHBUG00000019903	npm1b	93	42.295	ENSACAG00000015626	-	100	41.914	Anolis_carolinensis
ENSHBUG00000019903	npm1b	52	100.000	ENSACLG00000013812	npm1b	76	100.000	Astatotilapia_calliptera
ENSHBUG00000019903	npm1b	93	63.696	ENSAMXG00000042148	npm1b	99	61.716	Astyanax_mexicanus
ENSHBUG00000019903	npm1b	57	41.989	ENSCAFG00000023359	-	67	40.571	Canis_familiaris
ENSHBUG00000019903	npm1b	93	43.730	ENSCPBG00000021221	-	60	42.157	Chrysemys_picta_bellii
ENSHBUG00000019903	npm1b	95	76.667	ENSCSEG00000004530	npm1b	100	74.000	Cynoglossus_semilaevis
ENSHBUG00000019903	npm1b	95	78.930	ENSCVAG00000013016	npm1b	100	78.930	Cyprinodon_variegatus
ENSHBUG00000019903	npm1b	95	65.798	ENSDARG00000037675	npm1b	99	64.238	Danio_rerio
ENSHBUG00000019903	npm1b	95	65.359	ENSELUG00000022123	npm1b	99	65.359	Esox_lucius
ENSHBUG00000019903	npm1b	89	46.021	ENSFALG00000003320	-	94	43.750	Ficedula_albicollis
ENSHBUG00000019903	npm1b	95	79.734	ENSFHEG00000020794	npm1b	100	77.076	Fundulus_heteroclitus
ENSHBUG00000019903	npm1b	93	61.695	ENSGMOG00000002689	npm1b	100	58.667	Gadus_morhua
ENSHBUG00000019903	npm1b	94	45.928	ENSGALG00000002197	-	73	45.277	Gallus_gallus
ENSHBUG00000019903	npm1b	95	79.264	ENSGAFG00000017709	npm1b	100	76.589	Gambusia_affinis
ENSHBUG00000019903	npm1b	93	81.293	ENSGACG00000016706	npm1b	100	77.891	Gasterosteus_aculeatus
ENSHBUG00000019903	npm1b	93	41.801	ENSGAGG00000020250	-	100	41.176	Gopherus_agassizii
ENSHBUG00000019903	npm1b	95	73.000	ENSHCOG00000003895	npm1b	100	72.000	Hippocampus_comes
ENSHBUG00000019903	npm1b	94	61.130	ENSIPUG00000020165	npm1b	99	61.462	Ictalurus_punctatus
ENSHBUG00000019903	npm1b	94	81.356	ENSKMAG00000008260	npm1b	99	81.695	Kryptolebias_marmoratus
ENSHBUG00000019903	npm1b	60	85.638	ENSLBEG00000001304	-	70	90.780	Labrus_bergylta
ENSHBUG00000019903	npm1b	87	39.474	ENSLACG00000001779	-	100	37.543	Latimeria_chalumnae
ENSHBUG00000019903	npm1b	89	47.635	ENSLOCG00000001942	npm1b	100	48.649	Lepisosteus_oculatus
ENSHBUG00000019903	npm1b	68	78.082	ENSMAMG00000015335	npm1b	100	75.342	Mastacembelus_armatus
ENSHBUG00000019903	npm1b	88	45.263	ENSMGAG00000001591	-	100	44.211	Meleagris_gallopavo
ENSHBUG00000019903	npm1b	77	78.601	ENSMALG00000015383	npm1b	100	78.189	Monopterus_albus
ENSHBUG00000019903	npm1b	96	87.667	ENSONIG00000001397	npm1b	100	82.903	Oreochromis_niloticus
ENSHBUG00000019903	npm1b	95	63.880	ENSOMEG00000003414	npm1b	100	61.538	Oryzias_melastigma
ENSHBUG00000019903	npm1b	95	58.576	ENSPKIG00000020050	npm1b	99	58.766	Paramormyrops_kingsleyae
ENSHBUG00000019903	npm1b	91	45.695	ENSPSIG00000011204	-	92	44.178	Pelodiscus_sinensis
ENSHBUG00000019903	npm1b	95	80.268	ENSPFOG00000018357	npm1b	100	80.268	Poecilia_formosa
ENSHBUG00000019903	npm1b	52	99.383	ENSPNYG00000001427	npm1b	76	99.383	Pundamilia_nyererei
ENSHBUG00000019903	npm1b	93	63.880	ENSPNAG00000005498	npm1b	99	61.204	Pygocentrus_nattereri
ENSHBUG00000019903	npm1b	94	58.000	ENSSFOG00015005064	npm1b	100	58.333	Scleropages_formosus
ENSHBUG00000019903	npm1b	95	80.936	ENSSMAG00000008088	npm1b	100	78.261	Scophthalmus_maximus
ENSHBUG00000019903	npm1b	95	85.284	ENSSDUG00000007726	npm1b	100	82.609	Seriola_dumerili
ENSHBUG00000019903	npm1b	95	85.619	ENSSLDG00000021396	npm1b	100	82.943	Seriola_lalandi_dorsalis
ENSHBUG00000019903	npm1b	95	85.284	ENSSPAG00000011152	npm1b	100	81.940	Stegastes_partitus
ENSHBUG00000019903	npm1b	88	45.139	ENSTGUG00000014970	-	100	43.403	Taeniopygia_guttata
ENSHBUG00000019903	npm1b	96	74.013	ENSTRUG00000008105	npm1b	96	71.711	Takifugu_rubripes
ENSHBUG00000019903	npm1b	95	70.100	ENSTNIG00000013057	npm1b	100	68.106	Tetraodon_nigroviridis
ENSHBUG00000019903	npm1b	92	44.186	ENSXETG00000008403	npm1	100	40.968	Xenopus_tropicalis
ENSHBUG00000019903	npm1b	95	80.602	ENSXMAG00000001986	npm1b	100	80.602	Xiphophorus_maculatus