EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019992 (Gene tree)
Gene ID: 102301861
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 13298 bases
Position: chrJH425495.1:795769-809066
Accession: 102301861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033212	RRM_1	PF00076.22	7.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000026864	-	7588	XM_005934650	ENSHBUP00000033212	1807 (aa)	XP_005934712	UPI0003BD5D11

Gene Model

Click here to download ENSHBUG00000019992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019992	setd1ba	52	66.885	ENSHBUG00000008893	setd1a	59	65.924

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019992	setd1ba	55	90.256	ENSAPOG00000014731	setd1ba	100	85.924	Acanthochromis_polyacanthus
ENSHBUG00000019992	setd1ba	100	84.471	ENSACIG00000016453	setd1ba	56	90.963	Amphilophus_citrinellus
ENSHBUG00000019992	setd1ba	97	86.308	ENSAOCG00000012148	setd1ba	99	85.634	Amphiprion_ocellaris
ENSHBUG00000019992	setd1ba	100	83.032	ENSAPEG00000010762	setd1ba	99	81.938	Amphiprion_percula
ENSHBUG00000019992	setd1ba	91	84.650	ENSATEG00000021563	setd1ba	99	84.318	Anabas_testudineus
ENSHBUG00000019992	setd1ba	88	58.865	ENSAPLG00000005217	SETD1B	82	58.991	Anas_platyrhynchos
ENSHBUG00000019992	setd1ba	100	99.448	ENSACLG00000016584	setd1ba	100	99.448	Astatotilapia_calliptera
ENSHBUG00000019992	setd1ba	50	71.557	ENSCHIG00000013406	SETD1B	89	53.130	Capra_hircus
ENSHBUG00000019992	setd1ba	51	79.091	ENSCCAG00000031928	SETD1B	86	56.529	Cebus_capucinus
ENSHBUG00000019992	setd1ba	68	65.939	ENSCLAG00000013200	SETD1B	80	65.939	Chinchilla_lanigera
ENSHBUG00000019992	setd1ba	100	77.354	ENSCSEG00000001458	setd1ba	55	80.887	Cynoglossus_semilaevis
ENSHBUG00000019992	setd1ba	55	80.420	ENSCVAG00000022068	setd1ba	55	80.420	Cyprinodon_variegatus
ENSHBUG00000019992	setd1ba	52	82.663	ENSFALG00000009136	SETD1B	88	58.591	Ficedula_albicollis
ENSHBUG00000019992	setd1ba	52	90.476	ENSGMOG00000009831	setd1ba	59	90.476	Gadus_morhua
ENSHBUG00000019992	setd1ba	88	82.435	ENSGAFG00000008712	setd1ba	88	82.643	Gambusia_affinis
ENSHBUG00000019992	setd1ba	95	79.188	ENSKMAG00000007804	setd1ba	54	78.042	Kryptolebias_marmoratus
ENSHBUG00000019992	setd1ba	100	76.496	ENSLBEG00000020113	setd1ba	55	80.862	Labrus_bergylta
ENSHBUG00000019992	setd1ba	69	80.000	ENSLAFG00000026518	SETD1B	73	79.141	Loxodonta_africana
ENSHBUG00000019992	setd1ba	100	83.885	ENSMAMG00000011027	setd1ba	100	83.044	Mastacembelus_armatus
ENSHBUG00000019992	setd1ba	100	99.448	ENSMZEG00005026617	setd1ba	100	99.448	Maylandia_zebra
ENSHBUG00000019992	setd1ba	67	56.683	ENSMGAG00000004421	SETD1B	86	57.071	Meleagris_gallopavo
ENSHBUG00000019992	setd1ba	54	84.608	ENSMMOG00000008190	setd1ba	55	83.694	Mola_mola
ENSHBUG00000019992	setd1ba	100	82.149	ENSMALG00000005362	setd1ba	55	87.328	Monopterus_albus
ENSHBUG00000019992	setd1ba	100	96.075	ENSNBRG00000002915	setd1ba	99	96.075	Neolamprologus_brichardi
ENSHBUG00000019992	setd1ba	50	82.792	ENSODEG00000010155	SETD1B	80	56.731	Octodon_degus
ENSHBUG00000019992	setd1ba	100	97.405	ENSONIG00000013898	setd1ba	99	97.405	Oreochromis_niloticus
ENSHBUG00000019992	setd1ba	55	81.918	ENSORLG00000008435	setd1ba	55	81.119	Oryzias_latipes
ENSHBUG00000019992	setd1ba	100	77.163	ENSORLG00020017079	setd1ba	55	81.057	Oryzias_latipes_hni
ENSHBUG00000019992	setd1ba	66	76.733	ENSORLG00015004156	setd1ba	81	81.647	Oryzias_latipes_hsok
ENSHBUG00000019992	setd1ba	87	78.365	ENSPMGG00000011527	setd1ba	91	78.365	Periophthalmus_magnuspinnatus
ENSHBUG00000019992	setd1ba	50	80.317	ENSPCIG00000028605	SETD1B	87	57.928	Phascolarctos_cinereus
ENSHBUG00000019992	setd1ba	55	80.990	ENSPFOG00000019768	setd1ba	99	76.600	Poecilia_formosa
ENSHBUG00000019992	setd1ba	100	78.183	ENSPREG00000011589	setd1ba	100	78.870	Poecilia_reticulata
ENSHBUG00000019992	setd1ba	100	96.405	ENSPNYG00000009484	setd1ba	99	96.405	Pundamilia_nyererei
ENSHBUG00000019992	setd1ba	94	60.706	ENSPNAG00000016011	setd1ba	57	66.475	Pygocentrus_nattereri
ENSHBUG00000019992	setd1ba	100	86.656	ENSSPAG00000015470	setd1ba	100	86.111	Stegastes_partitus
ENSHBUG00000019992	setd1ba	75	80.488	ENSSSCG00000009806	SETD1B	90	59.380	Sus_scrofa
ENSHBUG00000019992	setd1ba	52	82.371	ENSTGUG00000006093	-	86	58.341	Taeniopygia_guttata
ENSHBUG00000019992	setd1ba	100	79.185	ENSTNIG00000009090	setd1ba	56	84.442	Tetraodon_nigroviridis
ENSHBUG00000019992	setd1ba	54	81.194	ENSXCOG00000004451	setd1ba	99	76.831	Xiphophorus_couchianus