EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000020071 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 1807 bases
Position: chrJH428532.1:4324-6130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017997	zf-C2H2	PF00096.26	1.4e-31	1	6
ENSHBUP00000017997	zf-C2H2	PF00096.26	1.4e-31	2	6
ENSHBUP00000017997	zf-C2H2	PF00096.26	1.4e-31	3	6
ENSHBUP00000017997	zf-C2H2	PF00096.26	1.4e-31	4	6
ENSHBUP00000017997	zf-C2H2	PF00096.26	1.4e-31	5	6
ENSHBUP00000017997	zf-C2H2	PF00096.26	1.4e-31	6	6
ENSHBUP00000017997	zf-met	PF12874.7	5.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034901	-	1807	-	ENSHBUP00000017997	402 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000020071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000020071	-	64	58.462	ENSHBUG00000012565	-	95	56.585
ENSHBUG00000020071	-	58	45.690	ENSHBUG00000006863	-	88	45.690
ENSHBUG00000020071	-	68	51.408	ENSHBUG00000000146	-	99	53.488
ENSHBUG00000020071	-	56	42.857	ENSHBUG00000012828	znf341	61	42.857
ENSHBUG00000020071	-	50	46.043	ENSHBUG00000023209	-	91	46.043
ENSHBUG00000020071	-	67	47.742	ENSHBUG00000011194	-	98	47.742
ENSHBUG00000020071	-	85	51.000	ENSHBUG00000002526	-	91	51.000
ENSHBUG00000020071	-	51	40.116	ENSHBUG00000013264	-	87	40.116
ENSHBUG00000020071	-	73	56.383	ENSHBUG00000017843	-	70	56.383
ENSHBUG00000020071	-	92	49.153	ENSHBUG00000007188	-	78	50.859
ENSHBUG00000020071	-	72	55.914	ENSHBUG00000021028	-	99	48.205
ENSHBUG00000020071	-	78	47.748	ENSHBUG00000013065	-	81	47.748
ENSHBUG00000020071	-	57	44.221	ENSHBUG00000016546	-	64	44.221
ENSHBUG00000020071	-	68	52.663	ENSHBUG00000002889	-	61	52.663
ENSHBUG00000020071	-	78	46.939	ENSHBUG00000002881	-	86	46.939
ENSHBUG00000020071	-	72	52.821	ENSHBUG00000015166	-	96	52.821
ENSHBUG00000020071	-	50	45.745	ENSHBUG00000009274	-	85	45.745
ENSHBUG00000020071	-	76	51.290	ENSHBUG00000012984	-	98	54.500
ENSHBUG00000020071	-	81	49.162	ENSHBUG00000013542	-	76	49.162
ENSHBUG00000020071	-	55	49.383	ENSHBUG00000002393	-	53	49.383
ENSHBUG00000020071	-	56	40.936	ENSHBUG00000003449	-	90	40.936
ENSHBUG00000020071	-	50	38.571	ENSHBUG00000007764	snai2	60	38.621
ENSHBUG00000020071	-	50	40.594	ENSHBUG00000005726	-	55	39.806
ENSHBUG00000020071	-	83	50.000	ENSHBUG00000013490	-	72	50.000
ENSHBUG00000020071	-	54	36.937	ENSHBUG00000009720	-	61	36.937
ENSHBUG00000020071	-	52	33.810	ENSHBUG00000014494	-	68	33.810
ENSHBUG00000020071	-	55	60.000	ENSHBUG00000006984	-	98	60.000
ENSHBUG00000020071	-	68	55.682	ENSHBUG00000021906	-	100	55.682
ENSHBUG00000020071	-	50	42.105	ENSHBUG00000016334	-	50	42.105
ENSHBUG00000020071	-	68	41.579	ENSHBUG00000002320	-	65	41.579
ENSHBUG00000020071	-	51	48.276	ENSHBUG00000020527	-	89	48.276
ENSHBUG00000020071	-	50	43.434	ENSHBUG00000016927	-	79	43.434
ENSHBUG00000020071	-	57	45.181	ENSHBUG00000016384	-	90	44.910
ENSHBUG00000020071	-	55	39.610	ENSHBUG00000019090	ZNF319	97	39.610
ENSHBUG00000020071	-	56	46.632	ENSHBUG00000022063	-	69	46.632
ENSHBUG00000020071	-	50	45.055	ENSHBUG00000006238	-	98	45.055
ENSHBUG00000020071	-	53	51.562	ENSHBUG00000019800	-	94	51.562
ENSHBUG00000020071	-	57	50.242	ENSHBUG00000002541	-	79	50.242
ENSHBUG00000020071	-	85	58.671	ENSHBUG00000018916	-	90	58.382
ENSHBUG00000020071	-	56	56.216	ENSHBUG00000021003	-	97	56.216
ENSHBUG00000020071	-	86	42.424	ENSHBUG00000004840	znf646	72	42.424
ENSHBUG00000020071	-	80	37.748	ENSHBUG00000012492	scrt2	72	37.748
ENSHBUG00000020071	-	52	47.059	ENSHBUG00000000731	-	60	46.512
ENSHBUG00000020071	-	54	45.455	ENSHBUG00000015719	-	96	46.392
ENSHBUG00000020071	-	50	40.314	ENSHBUG00000023595	znf652	65	40.104
ENSHBUG00000020071	-	71	52.764	ENSHBUG00000012758	-	99	54.726
ENSHBUG00000020071	-	58	46.032	ENSHBUG00000004217	-	61	46.032
ENSHBUG00000020071	-	50	44.330	ENSHBUG00000006250	-	82	44.330
ENSHBUG00000020071	-	53	40.789	ENSHBUG00000006656	-	60	40.789
ENSHBUG00000020071	-	79	42.284	ENSHBUG00000021970	-	96	51.020
ENSHBUG00000020071	-	55	51.948	ENSHBUG00000003529	-	78	51.948
ENSHBUG00000020071	-	54	48.026	ENSHBUG00000002307	-	82	48.026
ENSHBUG00000020071	-	55	50.279	ENSHBUG00000007316	-	71	50.279
ENSHBUG00000020071	-	53	44.560	ENSHBUG00000002961	-	95	44.560
ENSHBUG00000020071	-	53	43.434	ENSHBUG00000014725	-	90	43.434
ENSHBUG00000020071	-	57	44.720	ENSHBUG00000006662	-	64	44.720
ENSHBUG00000020071	-	81	53.614	ENSHBUG00000006977	-	81	54.487
ENSHBUG00000020071	-	86	54.651	ENSHBUG00000012230	-	97	54.651
ENSHBUG00000020071	-	56	41.341	ENSHBUG00000013296	-	98	41.341
ENSHBUG00000020071	-	73	50.685	ENSHBUG00000012007	-	88	50.685
ENSHBUG00000020071	-	54	47.273	ENSHBUG00000002841	-	78	47.273
ENSHBUG00000020071	-	77	45.078	ENSHBUG00000013467	-	76	45.078
ENSHBUG00000020071	-	68	57.009	ENSHBUG00000017869	-	100	57.009
ENSHBUG00000020071	-	61	54.962	ENSHBUG00000017864	-	95	54.962
ENSHBUG00000020071	-	82	50.340	ENSHBUG00000015226	-	74	50.340
ENSHBUG00000020071	-	89	57.071	ENSHBUG00000007068	-	85	57.071
ENSHBUG00000020071	-	50	44.910	ENSHBUG00000005451	gfi1b	52	44.910
ENSHBUG00000020071	-	53	44.444	ENSHBUG00000005809	-	97	44.444
ENSHBUG00000020071	-	75	55.000	ENSHBUG00000017372	-	92	55.000
ENSHBUG00000020071	-	81	53.000	ENSHBUG00000004718	-	99	53.000
ENSHBUG00000020071	-	57	39.333	ENSHBUG00000017542	znf526	52	40.411
ENSHBUG00000020071	-	89	48.851	ENSHBUG00000011944	-	80	48.252
ENSHBUG00000020071	-	81	49.091	ENSHBUG00000003165	-	94	49.091
ENSHBUG00000020071	-	78	50.000	ENSHBUG00000015803	-	98	51.163
ENSHBUG00000020071	-	54	45.029	ENSHBUG00000002878	-	66	45.732
ENSHBUG00000020071	-	61	38.991	ENSHBUG00000012432	-	69	38.863
ENSHBUG00000020071	-	54	48.223	ENSHBUG00000002530	-	53	48.223
ENSHBUG00000020071	-	87	51.852	ENSHBUG00000002533	-	87	51.852
ENSHBUG00000020071	-	50	54.945	ENSHBUG00000013194	-	83	54.945
ENSHBUG00000020071	-	50	57.377	ENSHBUG00000015942	-	95	50.000
ENSHBUG00000020071	-	72	43.810	ENSHBUG00000009837	znf236	66	43.810
ENSHBUG00000020071	-	74	51.695	ENSHBUG00000001075	-	98	51.695
ENSHBUG00000020071	-	50	40.909	ENSHBUG00000005848	-	87	40.909
ENSHBUG00000020071	-	54	41.327	ENSHBUG00000013518	-	90	47.887
ENSHBUG00000020071	-	62	45.690	ENSHBUG00000018885	-	83	36.940
ENSHBUG00000020071	-	71	43.667	ENSHBUG00000009941	-	81	43.667
ENSHBUG00000020071	-	58	39.111	ENSHBUG00000015404	-	85	40.141
ENSHBUG00000020071	-	56	38.255	ENSHBUG00000009815	znf319b	85	38.255
ENSHBUG00000020071	-	77	44.545	ENSHBUG00000009953	-	90	44.545
ENSHBUG00000020071	-	83	43.571	ENSHBUG00000004077	-	94	47.664
ENSHBUG00000020071	-	54	50.485	ENSHBUG00000019377	-	61	50.485
ENSHBUG00000020071	-	52	53.757	ENSHBUG00000000099	-	85	53.757
ENSHBUG00000020071	-	82	56.250	ENSHBUG00000012215	-	96	56.000
ENSHBUG00000020071	-	62	38.725	ENSHBUG00000017445	zbtb41	55	38.725
ENSHBUG00000020071	-	59	39.091	ENSHBUG00000015393	-	81	38.914
ENSHBUG00000020071	-	87	44.531	ENSHBUG00000022021	-	69	44.531
ENSHBUG00000020071	-	55	48.731	ENSHBUG00000003057	-	96	47.090
ENSHBUG00000020071	-	78	49.371	ENSHBUG00000011725	-	98	49.371
ENSHBUG00000020071	-	83	44.355	ENSHBUG00000000636	-	78	44.355
ENSHBUG00000020071	-	68	40.102	ENSHBUG00000023375	prdm5	84	40.102
ENSHBUG00000020071	-	55	51.323	ENSHBUG00000013292	-	65	51.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020071	-	89	47.283	ENSACIG00000017647	-	99	57.098	Amphilophus_citrinellus
ENSHBUG00000020071	-	86	54.822	ENSAOCG00000003277	-	86	54.822	Amphiprion_ocellaris
ENSHBUG00000020071	-	58	43.005	ENSAPEG00000016601	-	82	43.005	Amphiprion_percula
ENSHBUG00000020071	-	57	44.221	ENSACLG00000015989	-	90	44.022	Astatotilapia_calliptera
ENSHBUG00000020071	-	100	99.005	ENSACLG00000005615	-	100	99.005	Astatotilapia_calliptera
ENSHBUG00000020071	-	57	43.284	ENSCSAVG00000002179	-	99	43.284	Ciona_savignyi
ENSHBUG00000020071	-	52	49.123	ENSCGRG00001004047	-	67	49.123	Cricetulus_griseus_chok1gshd
ENSHBUG00000020071	-	56	46.875	ENSEBUG00000002589	-	74	46.875	Eptatretus_burgeri
ENSHBUG00000020071	-	59	50.000	ENSEBUG00000011244	-	86	50.000	Eptatretus_burgeri
ENSHBUG00000020071	-	56	46.392	ENSEBUG00000002537	-	90	46.392	Eptatretus_burgeri
ENSHBUG00000020071	-	57	44.221	ENSMZEG00005027844	-	52	44.221	Maylandia_zebra
ENSHBUG00000020071	-	51	45.050	ENSMZEG00005020731	-	83	45.050	Maylandia_zebra
ENSHBUG00000020071	-	53	51.020	MGP_SPRETEiJ_G0030709	-	67	51.020	Mus_spretus
ENSHBUG00000020071	-	80	73.520	ENSNBRG00000023229	-	99	73.520	Neolamprologus_brichardi
ENSHBUG00000020071	-	53	44.335	ENSONIG00000018188	-	100	44.118	Oreochromis_niloticus
ENSHBUG00000020071	-	58	44.388	ENSONIG00000014100	-	89	44.221	Oreochromis_niloticus
ENSHBUG00000020071	-	51	47.297	ENSONIG00000006238	-	99	47.297	Oreochromis_niloticus
ENSHBUG00000020071	-	62	44.118	ENSPFOG00000007708	-	99	44.118	Poecilia_formosa
ENSHBUG00000020071	-	80	55.932	ENSPLAG00000010448	-	80	49.541	Poecilia_latipinna
ENSHBUG00000020071	-	53	46.766	ENSPCAG00000001613	-	75	46.766	Procavia_capensis
ENSHBUG00000020071	-	57	45.355	ENSPNYG00000005671	-	76	45.355	Pundamilia_nyererei
ENSHBUG00000020071	-	54	53.933	ENSPNAG00000015131	-	89	53.933	Pygocentrus_nattereri
ENSHBUG00000020071	-	58	52.332	ENSSFOG00015000652	ZNF775	86	52.332	Scleropages_formosus
ENSHBUG00000020071	-	85	54.000	ENSSDUG00000005401	-	95	58.586	Seriola_dumerili
ENSHBUG00000020071	-	52	46.701	ENSSDUG00000004089	-	96	48.077	Seriola_dumerili
ENSHBUG00000020071	-	62	42.640	ENSSDUG00000020595	-	92	42.640	Seriola_dumerili
ENSHBUG00000020071	-	54	51.244	ENSSPUG00000007064	-	98	50.829	Sphenodon_punctatus
ENSHBUG00000020071	-	55	45.540	ENSSPAG00000009587	-	94	48.913	Stegastes_partitus
ENSHBUG00000020071	-	53	50.000	ENSTTRG00000004891	-	59	49.718	Tursiops_truncatus
ENSHBUG00000020071	-	61	49.123	ENSXETG00000030967	-	94	49.123	Xenopus_tropicalis
ENSHBUG00000020071	-	58	45.562	ENSXETG00000015125	-	95	45.562	Xenopus_tropicalis