EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000020196 (Gene tree)
Gene ID: 102308132
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3733 bases
Position: chrJH425617.1:320316-324048
Accession: 102308132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033339	RRM_1	PF00076.22	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034954	-	1967	XM_005940828	ENSHBUP00000033339	273 (aa)	XP_005940890	UPI000329C197

Gene Model

Click here to download ENSHBUG00000020196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000020196	alyref	100	54.577	ENSHBUG00000001454	-	100	53.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020196	alyref	100	53.430	ENSAPOG00000000183	-	100	51.986	Acanthochromis_polyacanthus
ENSHBUG00000020196	alyref	100	51.761	ENSACIG00000020351	-	100	51.408	Amphilophus_citrinellus
ENSHBUG00000020196	alyref	99	84.191	ENSACIG00000006351	alyref	98	86.496	Amphilophus_citrinellus
ENSHBUG00000020196	alyref	100	89.011	ENSAOCG00000014012	alyref	100	87.912	Amphiprion_ocellaris
ENSHBUG00000020196	alyref	100	51.625	ENSAOCG00000019305	-	100	50.903	Amphiprion_ocellaris
ENSHBUG00000020196	alyref	100	53.069	ENSAPEG00000013527	-	100	50.903	Amphiprion_percula
ENSHBUG00000020196	alyref	100	89.011	ENSAPEG00000014603	alyref	100	87.912	Amphiprion_percula
ENSHBUG00000020196	alyref	100	55.396	ENSATEG00000000382	-	100	52.708	Anabas_testudineus
ENSHBUG00000020196	alyref	100	78.058	ENSATEG00000004307	alyref	100	82.014	Anabas_testudineus
ENSHBUG00000020196	alyref	51	72.340	ENSAPLG00000014745	-	100	70.213	Anas_platyrhynchos
ENSHBUG00000020196	alyref	100	100.000	ENSACLG00000008432	alyref	100	100.000	Astatotilapia_calliptera
ENSHBUG00000020196	alyref	100	54.610	ENSACLG00000010184	-	100	52.669	Astatotilapia_calliptera
ENSHBUG00000020196	alyref	99	75.180	ENSAMXG00000007359	alyref	100	73.665	Astyanax_mexicanus
ENSHBUG00000020196	alyref	99	47.253	ENSCING00000013568	-	99	46.014	Ciona_intestinalis
ENSHBUG00000020196	alyref	99	43.682	ENSCSAVG00000003324	-	99	41.241	Ciona_savignyi
ENSHBUG00000020196	alyref	100	78.909	ENSCSEG00000017800	alyref	100	81.685	Cynoglossus_semilaevis
ENSHBUG00000020196	alyref	100	49.091	ENSCVAG00000007789	-	100	46.237	Cyprinodon_variegatus
ENSHBUG00000020196	alyref	100	89.377	ENSCVAG00000014869	alyref	100	80.952	Cyprinodon_variegatus
ENSHBUG00000020196	alyref	100	77.739	ENSDARG00000077732	alyref	100	73.498	Danio_rerio
ENSHBUG00000020196	alyref	97	45.833	FBgn0010774	Ref1	73	45.192	Drosophila_melanogaster
ENSHBUG00000020196	alyref	99	51.111	ENSEBUG00000008253	alyref	95	50.000	Eptatretus_burgeri
ENSHBUG00000020196	alyref	72	46.305	ENSEBUG00000006305	alyref	100	39.223	Eptatretus_burgeri
ENSHBUG00000020196	alyref	100	71.377	ENSELUG00000017178	alyref	100	67.266	Esox_lucius
ENSHBUG00000020196	alyref	100	70.968	ENSELUG00000008849	-	100	62.724	Esox_lucius
ENSHBUG00000020196	alyref	59	77.019	ENSFALG00000011923	-	96	73.248	Ficedula_albicollis
ENSHBUG00000020196	alyref	100	46.909	ENSFHEG00000004698	-	100	45.455	Fundulus_heteroclitus
ENSHBUG00000020196	alyref	100	82.847	ENSFHEG00000019426	alyref	100	81.752	Fundulus_heteroclitus
ENSHBUG00000020196	alyref	69	56.585	ENSGMOG00000013122	-	100	58.854	Gadus_morhua
ENSHBUG00000020196	alyref	100	69.818	ENSGMOG00000009882	alyref	100	67.273	Gadus_morhua
ENSHBUG00000020196	alyref	100	45.035	ENSGAFG00000007573	-	76	48.485	Gambusia_affinis
ENSHBUG00000020196	alyref	100	83.755	ENSGAFG00000006014	alyref	100	76.173	Gambusia_affinis
ENSHBUG00000020196	alyref	98	48.339	ENSHCOG00000012825	-	94	45.522	Hippocampus_comes
ENSHBUG00000020196	alyref	100	72.043	ENSIPUG00000009469	alyref	100	70.609	Ictalurus_punctatus
ENSHBUG00000020196	alyref	75	63.462	ENSSTOG00000016570	-	100	58.373	Ictidomys_tridecemlineatus
ENSHBUG00000020196	alyref	100	80.364	ENSKMAG00000008912	alyref	100	81.818	Kryptolebias_marmoratus
ENSHBUG00000020196	alyref	100	50.725	ENSKMAG00000006462	-	100	49.275	Kryptolebias_marmoratus
ENSHBUG00000020196	alyref	100	85.252	ENSLBEG00000023118	alyref	90	84.892	Labrus_bergylta
ENSHBUG00000020196	alyref	99	48.375	ENSLBEG00000012930	-	99	46.715	Labrus_bergylta
ENSHBUG00000020196	alyref	100	49.829	ENSLBEG00000005387	-	66	54.040	Labrus_bergylta
ENSHBUG00000020196	alyref	78	73.853	ENSLOCG00000013879	alyref	89	69.124	Lepisosteus_oculatus
ENSHBUG00000020196	alyref	100	51.449	ENSMAMG00000005464	-	100	49.458	Mastacembelus_armatus
ENSHBUG00000020196	alyref	100	85.348	ENSMAMG00000003034	alyref	100	83.516	Mastacembelus_armatus
ENSHBUG00000020196	alyref	100	53.901	ENSMZEG00005012096	-	100	52.313	Maylandia_zebra
ENSHBUG00000020196	alyref	100	100.000	ENSMZEG00005008639	alyref	100	100.000	Maylandia_zebra
ENSHBUG00000020196	alyref	99	47.059	ENSMMOG00000007032	-	98	44.406	Mola_mola
ENSHBUG00000020196	alyref	99	84.074	ENSMMOG00000012458	alyref	97	81.319	Mola_mola
ENSHBUG00000020196	alyref	100	51.773	ENSMALG00000006054	-	100	48.387	Monopterus_albus
ENSHBUG00000020196	alyref	98	56.985	ENSMLUG00000022178	-	98	52.941	Myotis_lucifugus
ENSHBUG00000020196	alyref	100	58.865	ENSMLUG00000004098	-	100	57.509	Myotis_lucifugus
ENSHBUG00000020196	alyref	98	54.577	ENSMLUG00000022467	-	98	51.613	Myotis_lucifugus
ENSHBUG00000020196	alyref	100	57.801	ENSMLUG00000006521	-	100	56.738	Myotis_lucifugus
ENSHBUG00000020196	alyref	100	59.286	ENSMLUG00000014372	-	100	57.500	Myotis_lucifugus
ENSHBUG00000020196	alyref	98	54.093	ENSMLUG00000028605	-	98	53.405	Myotis_lucifugus
ENSHBUG00000020196	alyref	98	57.401	ENSMLUG00000030671	-	99	51.957	Myotis_lucifugus
ENSHBUG00000020196	alyref	98	54.244	ENSMLUG00000009247	-	98	51.661	Myotis_lucifugus
ENSHBUG00000020196	alyref	100	69.231	ENSNGAG00000022014	-	100	62.637	Nannospalax_galili
ENSHBUG00000020196	alyref	100	54.286	ENSNBRG00000017460	-	100	53.405	Neolamprologus_brichardi
ENSHBUG00000020196	alyref	100	98.545	ENSNBRG00000001747	alyref	100	98.545	Neolamprologus_brichardi
ENSHBUG00000020196	alyref	100	97.482	ENSONIG00000019434	alyref	100	97.482	Oreochromis_niloticus
ENSHBUG00000020196	alyref	100	56.679	ENSONIG00000003296	-	100	55.957	Oreochromis_niloticus
ENSHBUG00000020196	alyref	99	41.346	ENSORLG00000001620	-	58	46.226	Oryzias_latipes
ENSHBUG00000020196	alyref	100	87.273	ENSORLG00020011942	alyref	100	86.182	Oryzias_latipes_hni
ENSHBUG00000020196	alyref	100	48.364	ENSORLG00020015673	-	100	43.537	Oryzias_latipes_hni
ENSHBUG00000020196	alyref	100	48.746	ENSORLG00015015143	-	100	46.570	Oryzias_latipes_hsok
ENSHBUG00000020196	alyref	100	89.744	ENSORLG00015022664	alyref	100	87.546	Oryzias_latipes_hsok
ENSHBUG00000020196	alyref	100	88.686	ENSOMEG00000019176	alyref	100	82.847	Oryzias_melastigma
ENSHBUG00000020196	alyref	99	49.446	ENSOMEG00000007158	-	97	44.485	Oryzias_melastigma
ENSHBUG00000020196	alyref	70	74.211	ENSPPAG00000036403	-	68	69.474	Pan_paniscus
ENSHBUG00000020196	alyref	100	75.000	ENSPKIG00000007070	alyref	100	70.652	Paramormyrops_kingsleyae
ENSHBUG00000020196	alyref	99	70.696	ENSPKIG00000006233	-	81	64.964	Paramormyrops_kingsleyae
ENSHBUG00000020196	alyref	99	80.147	ENSPMGG00000016600	alyref	91	78.388	Periophthalmus_magnuspinnatus
ENSHBUG00000020196	alyref	71	47.475	ENSPMGG00000012994	-	97	46.154	Periophthalmus_magnuspinnatus
ENSHBUG00000020196	alyref	100	64.469	ENSPEMG00000016628	-	100	57.348	Peromyscus_maniculatus_bairdii
ENSHBUG00000020196	alyref	100	46.786	ENSPFOG00000017094	-	100	44.727	Poecilia_formosa
ENSHBUG00000020196	alyref	100	81.295	ENSPFOG00000022825	alyref	99	80.935	Poecilia_formosa
ENSHBUG00000020196	alyref	100	46.786	ENSPLAG00000014380	-	100	44.727	Poecilia_latipinna
ENSHBUG00000020196	alyref	100	81.949	ENSPLAG00000006948	alyref	100	81.227	Poecilia_latipinna
ENSHBUG00000020196	alyref	100	46.786	ENSPMEG00000023039	-	100	44.727	Poecilia_mexicana
ENSHBUG00000020196	alyref	100	81.295	ENSPMEG00000003547	alyref	100	80.935	Poecilia_mexicana
ENSHBUG00000020196	alyref	100	48.188	ENSPREG00000003649	-	100	45.421	Poecilia_reticulata
ENSHBUG00000020196	alyref	100	82.310	ENSPREG00000015795	alyref	100	81.588	Poecilia_reticulata
ENSHBUG00000020196	alyref	100	100.000	ENSPNYG00000017498	alyref	100	100.000	Pundamilia_nyererei
ENSHBUG00000020196	alyref	99	52.708	ENSPNYG00000002879	-	98	51.449	Pundamilia_nyererei
ENSHBUG00000020196	alyref	100	74.460	ENSPNAG00000002531	alyref	100	72.924	Pygocentrus_nattereri
ENSHBUG00000020196	alyref	81	68.584	ENSSBOG00000030924	-	87	68.342	Saimiri_boliviensis_boliviensis
ENSHBUG00000020196	alyref	99	55.678	ENSSHAG00000012866	-	99	51.648	Sarcophilus_harrisii
ENSHBUG00000020196	alyref	99	56.272	ENSSHAG00000000609	-	99	54.182	Sarcophilus_harrisii
ENSHBUG00000020196	alyref	70	76.042	ENSSFOG00015003678	alyref	83	68.750	Scleropages_formosus
ENSHBUG00000020196	alyref	78	77.103	ENSSFOG00015003923	alyref	73	70.561	Scleropages_formosus
ENSHBUG00000020196	alyref	100	49.823	ENSSMAG00000011169	-	100	52.764	Scophthalmus_maximus
ENSHBUG00000020196	alyref	100	82.609	ENSSMAG00000009283	alyref	100	85.145	Scophthalmus_maximus
ENSHBUG00000020196	alyref	100	88.645	ENSSDUG00000016158	alyref	100	87.546	Seriola_dumerili
ENSHBUG00000020196	alyref	100	87.179	ENSSLDG00000017803	alyref	100	87.179	Seriola_lalandi_dorsalis
ENSHBUG00000020196	alyref	99	53.261	ENSSPAG00000017028	-	96	51.095	Stegastes_partitus
ENSHBUG00000020196	alyref	100	48.763	ENSTRUG00000003051	-	100	48.201	Takifugu_rubripes
ENSHBUG00000020196	alyref	100	51.087	ENSTNIG00000014136	-	100	44.928	Tetraodon_nigroviridis
ENSHBUG00000020196	alyref	100	76.895	ENSTNIG00000011595	alyref	100	75.182	Tetraodon_nigroviridis
ENSHBUG00000020196	alyref	87	64.706	ENSVVUG00000000272	-	82	70.984	Vulpes_vulpes
ENSHBUG00000020196	alyref	99	82.847	ENSXCOG00000018047	alyref	99	74.368	Xiphophorus_couchianus
ENSHBUG00000020196	alyref	100	47.482	ENSXMAG00000018086	-	100	45.455	Xiphophorus_maculatus
ENSHBUG00000020196	alyref	99	82.847	ENSXMAG00000012218	alyref	99	74.368	Xiphophorus_maculatus