EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000020206 (Gene tree)
Gene ID
102300788
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Plus strand
Length
9766 bases
Position
chrJH425369.1:1086052-1095817
Accession
102300788
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000018112PABPPF00658.181.1e-3011
ENSHBUP00000018112RRM_5PF13893.68.2e-0911
ENSHBUP00000018112RRM_1PF00076.225.6e-9014
ENSHBUP00000018112RRM_1PF00076.225.6e-9024
ENSHBUP00000018112RRM_1PF00076.225.6e-9034
ENSHBUP00000018112RRM_1PF00076.225.6e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000034948-2803XM_005922322ENSHBUP00000018112627 (aa)XP_005922384UPI0003BCDF81
Gene Model
Click here to download ENSHBUG00000020206's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020206's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000020206pabpc45237.500ENSHBUG00000005058-5837.500
ENSHBUG00000020206pabpc47730.220ENSHBUG00000023154-7030.220
ENSHBUG00000020206pabpc46034.940ENSHBUG00000009691elavl48434.940
ENSHBUG00000020206pabpc46033.010ENSHBUG00000021196rbms35433.010
ENSHBUG00000020206pabpc49766.509ENSHBUG00000006134pabpc1l9965.827
ENSHBUG00000020206pabpc45934.737ENSHBUG00000023230rbms2a6733.981
ENSHBUG00000020206pabpc45936.145ENSHBUG00000005968ELAVL28536.145
ENSHBUG00000020206pabpc48491.304ENSHBUG00000020487pabpc1a9791.304
ENSHBUG00000020206pabpc45137.500ENSHBUG00000017881celf15537.500
ENSHBUG00000020206pabpc49975.987ENSHBUG00000002075pabpc1b9975.994
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000020206pabpc410085.032ENSG00000090621PABPC49996.396Homo_sapiens
ENSHBUG00000020206pabpc49996.926ENSAPOG00000001161pabpc410096.651Acanthochromis_polyacanthus
ENSHBUG00000020206pabpc410080.269ENSAMEG00000011535-10079.671Ailuropoda_melanoleuca
ENSHBUG00000020206pabpc49749.596ENSAMEG00000015083-9848.631Ailuropoda_melanoleuca
ENSHBUG00000020206pabpc410097.785ENSACIG00000023343pabpc410097.785Amphilophus_citrinellus
ENSHBUG00000020206pabpc410096.491ENSAOCG00000021529pabpc410096.491Amphiprion_ocellaris
ENSHBUG00000020206pabpc410096.491ENSAPEG00000019196pabpc410096.491Amphiprion_percula
ENSHBUG00000020206pabpc410097.134ENSATEG00000007402pabpc410097.134Anabas_testudineus
ENSHBUG00000020206pabpc49985.512ENSAPLG00000009729-10084.882Anas_platyrhynchos
ENSHBUG00000020206pabpc49884.752ENSACAG00000002544PABPC410084.043Anolis_carolinensis
ENSHBUG00000020206pabpc410083.204ENSANAG00000025079PABPC410083.125Aotus_nancymaae
ENSHBUG00000020206pabpc410099.841ENSACLG00000019558pabpc410099.841Astatotilapia_calliptera
ENSHBUG00000020206pabpc49986.846ENSAMXG00000018779pabpc49986.846Astyanax_mexicanus
ENSHBUG00000020206pabpc45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSHBUG00000020206pabpc410082.110ENSBTAG00000017125PABPC410081.498Bos_taurus
ENSHBUG00000020206pabpc410083.204ENSCJAG00000002512-10083.125Callithrix_jacchus
ENSHBUG00000020206pabpc47480.804ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSHBUG00000020206pabpc410083.359ENSCAFG00000003081PABPC410083.281Canis_familiaris
ENSHBUG00000020206pabpc410080.419ENSCAFG00020004161PABPC410079.821Canis_lupus_dingo
ENSHBUG00000020206pabpc410080.120ENSCHIG00000019398-10079.522Capra_hircus
ENSHBUG00000020206pabpc410065.586ENSCHIG00000023385-10065.123Capra_hircus
ENSHBUG00000020206pabpc410083.906ENSTSYG00000006532PABPC410083.281Carlito_syrichta
ENSHBUG00000020206pabpc49983.022ENSCAPG00000015984PABPC410082.616Cavia_aperea
ENSHBUG00000020206pabpc410083.256ENSCPOG00000009552PABPC410083.281Cavia_porcellus
ENSHBUG00000020206pabpc410083.048ENSCCAG00000037306PABPC410082.969Cebus_capucinus
ENSHBUG00000020206pabpc410083.359ENSCATG00000042164PABPC410083.281Cercocebus_atys
ENSHBUG00000020206pabpc410083.101ENSCLAG00000011899PABPC410083.438Chinchilla_lanigera
ENSHBUG00000020206pabpc410080.269ENSCSAG00000001135PABPC410079.671Chlorocebus_sabaeus
ENSHBUG00000020206pabpc48789.474ENSCHOG00000005327PABPC47990.027Choloepus_hoffmanni
ENSHBUG00000020206pabpc49986.299ENSCPBG00000001038PABPC410085.669Chrysemys_picta_bellii
ENSHBUG00000020206pabpc49983.596ENSCANG00000034177PABPC410083.518Colobus_angolensis_palliatus
ENSHBUG00000020206pabpc49885.528ENSCGRG00001018166Pabpc410084.554Cricetulus_griseus_chok1gshd
ENSHBUG00000020206pabpc49785.809ENSCGRG00000009777Pabpc410084.814Cricetulus_griseus_crigri
ENSHBUG00000020206pabpc410095.694ENSCSEG00000000130pabpc410095.694Cynoglossus_semilaevis
ENSHBUG00000020206pabpc49996.266ENSCVAG00000019246pabpc410096.266Cyprinodon_variegatus
ENSHBUG00000020206pabpc49892.823ENSDARG00000059259pabpc410092.562Danio_rerio
ENSHBUG00000020206pabpc49982.343ENSDNOG00000018444-10082.250Dasypus_novemcinctus
ENSHBUG00000020206pabpc410082.236ENSDORG00000011581Pabpc410081.623Dipodomys_ordii
ENSHBUG00000020206pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSHBUG00000020206pabpc48554.312ENSETEG00000009172-9953.417Echinops_telfairi
ENSHBUG00000020206pabpc49677.236ENSEBUG00000013782pabpc49977.083Eptatretus_burgeri
ENSHBUG00000020206pabpc49876.630ENSEBUG00000000992pabpc49976.312Eptatretus_burgeri
ENSHBUG00000020206pabpc410080.269ENSEASG00005014119PABPC410079.671Equus_asinus_asinus
ENSHBUG00000020206pabpc410080.269ENSECAG00000009396PABPC410079.671Equus_caballus
ENSHBUG00000020206pabpc49779.294ENSEEUG00000002962PABPC410078.326Erinaceus_europaeus
ENSHBUG00000020206pabpc49892.834ENSELUG00000003195pabpc410092.019Esox_lucius
ENSHBUG00000020206pabpc410083.359ENSFCAG00000015254-10083.281Felis_catus
ENSHBUG00000020206pabpc49985.266ENSFALG00000000543PABPC410085.647Ficedula_albicollis
ENSHBUG00000020206pabpc48852.229ENSFDAG00000010581-9950.000Fukomys_damarensis
ENSHBUG00000020206pabpc410080.120ENSFDAG00000020016-10079.522Fukomys_damarensis
ENSHBUG00000020206pabpc49996.326ENSFHEG00000007548pabpc410096.326Fundulus_heteroclitus
ENSHBUG00000020206pabpc410091.223ENSGMOG00000019025pabpc410091.223Gadus_morhua
ENSHBUG00000020206pabpc49986.299ENSGALG00000003800PABPC410085.669Gallus_gallus
ENSHBUG00000020206pabpc49997.847ENSGAFG00000018195pabpc410097.847Gambusia_affinis
ENSHBUG00000020206pabpc410094.418ENSGACG00000007179pabpc410094.418Gasterosteus_aculeatus
ENSHBUG00000020206pabpc49986.457ENSGAGG00000001888PABPC410085.827Gopherus_agassizii
ENSHBUG00000020206pabpc410083.204ENSGGOG00000004002PABPC410083.125Gorilla_gorilla
ENSHBUG00000020206pabpc410083.101ENSHGLG00000011162PABPC410083.125Heterocephalus_glaber_female
ENSHBUG00000020206pabpc410083.101ENSHGLG00100001580PABPC410083.125Heterocephalus_glaber_male
ENSHBUG00000020206pabpc410095.056ENSHCOG00000012694pabpc410096.013Hippocampus_comes
ENSHBUG00000020206pabpc49792.581ENSIPUG00000016620pabpc410091.798Ictalurus_punctatus
ENSHBUG00000020206pabpc410085.032ENSSTOG00000010416PABPC410084.395Ictidomys_tridecemlineatus
ENSHBUG00000020206pabpc410081.135ENSJJAG00000007781Pabpc410080.398Jaculus_jaculus
ENSHBUG00000020206pabpc410095.223ENSKMAG00000013597pabpc410095.223Kryptolebias_marmoratus
ENSHBUG00000020206pabpc410095.556ENSLBEG00000013654pabpc410095.556Labrus_bergylta
ENSHBUG00000020206pabpc49987.107ENSLACG00000011907PABPC410086.635Latimeria_chalumnae
ENSHBUG00000020206pabpc49991.811ENSLOCG00000001877pabpc410091.811Lepisosteus_oculatus
ENSHBUG00000020206pabpc410085.350ENSLAFG00000000151PABPC410084.713Loxodonta_africana
ENSHBUG00000020206pabpc410083.359ENSMFAG00000041481PABPC410083.281Macaca_fascicularis
ENSHBUG00000020206pabpc410080.269ENSMMUG00000007497PABPC410079.671Macaca_mulatta
ENSHBUG00000020206pabpc410083.359ENSMNEG00000043054PABPC410083.281Macaca_nemestrina
ENSHBUG00000020206pabpc410083.359ENSMLEG00000040716PABPC410083.281Mandrillus_leucophaeus
ENSHBUG00000020206pabpc410097.129ENSMAMG00000010025pabpc410097.129Mastacembelus_armatus
ENSHBUG00000020206pabpc410099.681ENSMZEG00005006141pabpc410099.681Maylandia_zebra
ENSHBUG00000020206pabpc49883.446ENSMGAG00000005408PABPC410082.770Meleagris_gallopavo
ENSHBUG00000020206pabpc45880.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSHBUG00000020206pabpc47791.667ENSMAUG00000019763-8488.073Mesocricetus_auratus
ENSHBUG00000020206pabpc47279.048ENSMAUG00000001295-9778.095Mesocricetus_auratus
ENSHBUG00000020206pabpc49975.179ENSMICG00000036729-10074.107Microcebus_murinus
ENSHBUG00000020206pabpc48884.505ENSMICG00000016633-10084.324Microcebus_murinus
ENSHBUG00000020206pabpc410084.127ENSMOCG00000006763Pabpc410083.594Microtus_ochrogaster
ENSHBUG00000020206pabpc410092.663ENSMMOG00000002363pabpc410092.823Mola_mola
ENSHBUG00000020206pabpc46071.733ENSMODG00000018051-9671.733Monodelphis_domestica
ENSHBUG00000020206pabpc49784.438ENSMODG00000017657-10083.207Monodelphis_domestica
ENSHBUG00000020206pabpc410096.979ENSMALG00000011017pabpc410096.979Monopterus_albus
ENSHBUG00000020206pabpc49971.088MGP_CAROLIEiJ_G0024864-10073.063Mus_caroli
ENSHBUG00000020206pabpc410079.522MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSHBUG00000020206pabpc410084.713ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSHBUG00000020206pabpc49980.000MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSHBUG00000020206pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSHBUG00000020206pabpc410080.269ENSMPUG00000014414-10079.671Mustela_putorius_furo
ENSHBUG00000020206pabpc49546.205ENSMPUG00000006836-10045.710Mustela_putorius_furo
ENSHBUG00000020206pabpc410084.873ENSMLUG00000012068PABPC410084.236Myotis_lucifugus
ENSHBUG00000020206pabpc410085.350ENSNGAG00000018292Pabpc410084.713Nannospalax_galili
ENSHBUG00000020206pabpc46099.519ENSNBRG00000009708pabpc49899.519Neolamprologus_brichardi
ENSHBUG00000020206pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSHBUG00000020206pabpc410083.359ENSNLEG00000011928PABPC410083.281Nomascus_leucogenys
ENSHBUG00000020206pabpc48595.238ENSOPRG00000011984PABPC48695.238Ochotona_princeps
ENSHBUG00000020206pabpc49974.120ENSODEG00000017434-10073.499Octodon_degus
ENSHBUG00000020206pabpc410083.204ENSODEG00000006592-10082.812Octodon_degus
ENSHBUG00000020206pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSHBUG00000020206pabpc410099.362ENSONIG00000008176pabpc410099.362Oreochromis_niloticus
ENSHBUG00000020206pabpc49985.669ENSOANG00000010001PABPC410085.039Ornithorhynchus_anatinus
ENSHBUG00000020206pabpc49580.691ENSOCUG00000000562PABPC48880.063Oryctolagus_cuniculus
ENSHBUG00000020206pabpc49997.222ENSORLG00000017479pabpc49997.222Oryzias_latipes
ENSHBUG00000020206pabpc49997.222ENSORLG00020018644pabpc410097.222Oryzias_latipes_hni
ENSHBUG00000020206pabpc49997.222ENSORLG00015015042pabpc410097.222Oryzias_latipes_hsok
ENSHBUG00000020206pabpc49995.793ENSOMEG00000014410pabpc410095.541Oryzias_melastigma
ENSHBUG00000020206pabpc410082.012ENSOGAG00000004067PABPC410081.098Otolemur_garnettii
ENSHBUG00000020206pabpc410080.120ENSOARG00000020060PABPC410079.522Ovis_aries
ENSHBUG00000020206pabpc410083.204ENSPPAG00000043625PABPC410083.125Pan_paniscus
ENSHBUG00000020206pabpc410083.359ENSPPRG00000024727PABPC410083.281Panthera_pardus
ENSHBUG00000020206pabpc410083.359ENSPTIG00000005829PABPC410083.281Panthera_tigris_altaica
ENSHBUG00000020206pabpc410083.204ENSPTRG00000000573PABPC410083.125Pan_troglodytes
ENSHBUG00000020206pabpc410083.359ENSPANG00000009484PABPC410083.281Papio_anubis
ENSHBUG00000020206pabpc410090.439ENSPKIG00000025356pabpc410090.439Paramormyrops_kingsleyae
ENSHBUG00000020206pabpc49986.614ENSPSIG00000016892PABPC410085.984Pelodiscus_sinensis
ENSHBUG00000020206pabpc410091.866ENSPMGG00000009073pabpc410091.069Periophthalmus_magnuspinnatus
ENSHBUG00000020206pabpc410079.294ENSPEMG00000024193-10079.969Peromyscus_maniculatus_bairdii
ENSHBUG00000020206pabpc410082.791ENSPEMG00000023569-10083.438Peromyscus_maniculatus_bairdii
ENSHBUG00000020206pabpc48875.087ENSPMAG00000002836pabpc410075.958Petromyzon_marinus
ENSHBUG00000020206pabpc49574.580ENSPMAG00000007885pabpc410073.931Petromyzon_marinus
ENSHBUG00000020206pabpc49787.480ENSPCIG00000020674PABPC410095.146Phascolarctos_cinereus
ENSHBUG00000020206pabpc49995.687ENSPFOG00000002682pabpc410095.687Poecilia_formosa
ENSHBUG00000020206pabpc49995.847ENSPLAG00000010112pabpc410095.847Poecilia_latipinna
ENSHBUG00000020206pabpc49896.429ENSPMEG00000019739pabpc410095.687Poecilia_mexicana
ENSHBUG00000020206pabpc49996.166ENSPREG00000001589pabpc410096.166Poecilia_reticulata
ENSHBUG00000020206pabpc410080.120ENSPPYG00000001506PABPC410079.522Pongo_abelii
ENSHBUG00000020206pabpc410075.486ENSPCAG00000003341PABPC410074.888Procavia_capensis
ENSHBUG00000020206pabpc410083.230ENSPCOG00000023725-10083.151Propithecus_coquereli
ENSHBUG00000020206pabpc49969.444ENSPCOG00000025882-9582.857Propithecus_coquereli
ENSHBUG00000020206pabpc49879.139ENSPVAG00000002187PABPC410078.477Pteropus_vampyrus
ENSHBUG00000020206pabpc410099.841ENSPNYG00000006134pabpc410099.841Pundamilia_nyererei
ENSHBUG00000020206pabpc49993.819ENSPNAG00000024355pabpc410093.819Pygocentrus_nattereri
ENSHBUG00000020206pabpc410079.939ENSRNOG00000028592AABR07035074.110079.326Rattus_norvegicus
ENSHBUG00000020206pabpc410082.083ENSRNOG00000015642Pabpc410081.470Rattus_norvegicus
ENSHBUG00000020206pabpc410083.359ENSRBIG00000039761PABPC410083.281Rhinopithecus_bieti
ENSHBUG00000020206pabpc410083.359ENSRROG00000033355PABPC410083.281Rhinopithecus_roxellana
ENSHBUG00000020206pabpc410083.048ENSSBOG00000026193PABPC410082.969Saimiri_boliviensis_boliviensis
ENSHBUG00000020206pabpc49787.480ENSSHAG00000018139PABPC410086.142Sarcophilus_harrisii
ENSHBUG00000020206pabpc49991.013ENSSFOG00015023514pabpc410091.013Scleropages_formosus
ENSHBUG00000020206pabpc410095.853ENSSMAG00000009007pabpc410095.853Scophthalmus_maximus
ENSHBUG00000020206pabpc49996.440ENSSDUG00000012683pabpc410096.172Seriola_dumerili
ENSHBUG00000020206pabpc49996.440ENSSLDG00000013025pabpc410096.172Seriola_lalandi_dorsalis
ENSHBUG00000020206pabpc410073.991ENSSARG00000000310PABPC410073.393Sorex_araneus
ENSHBUG00000020206pabpc49986.963ENSSPUG00000003204PABPC410086.328Sphenodon_punctatus
ENSHBUG00000020206pabpc410096.491ENSSPAG00000009252pabpc410096.491Stegastes_partitus
ENSHBUG00000020206pabpc410083.359ENSSSCG00000003660-10083.281Sus_scrofa
ENSHBUG00000020206pabpc48945.213ENSSSCG00000036170-9645.213Sus_scrofa
ENSHBUG00000020206pabpc49981.654ENSTGUG00000001266PABPC410081.805Taeniopygia_guttata
ENSHBUG00000020206pabpc410094.418ENSTRUG00000005907pabpc410094.418Takifugu_rubripes
ENSHBUG00000020206pabpc410087.778ENSTNIG00000016902pabpc410087.460Tetraodon_nigroviridis
ENSHBUG00000020206pabpc49969.040ENSTBEG00000009035PABPC410068.543Tupaia_belangeri
ENSHBUG00000020206pabpc49962.712ENSTTRG00000014340PABPC410067.715Tursiops_truncatus
ENSHBUG00000020206pabpc410083.359ENSUAMG00000000303PABPC410083.281Ursus_americanus
ENSHBUG00000020206pabpc410089.569ENSUMAG00000019585PABPC410092.048Ursus_maritimus
ENSHBUG00000020206pabpc47170.796ENSVPAG00000010041PABPC47370.796Vicugna_pacos
ENSHBUG00000020206pabpc410083.359ENSVVUG00000005215PABPC410083.281Vulpes_vulpes
ENSHBUG00000020206pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSHBUG00000020206pabpc49982.835ENSXETG00000010946pabpc410082.205Xenopus_tropicalis
ENSHBUG00000020206pabpc49997.361ENSXCOG00000013190pabpc49696.698Xiphophorus_couchianus
ENSHBUG00000020206pabpc49996.166ENSXMAG00000019007pabpc410096.166Xiphophorus_maculatus

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