EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000020226 (Gene tree)
Gene ID: 102301728
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 13721 bases
Position: chrJH425389.1:1036595-1050315
Accession: 102301728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033361	Suf	PF05843.14	7.2e-10	1	1
ENSHBUP00000033361	S1	PF00575.23	1.3e-63	1	4
ENSHBUP00000033361	S1	PF00575.23	1.3e-63	2	4
ENSHBUP00000033361	S1	PF00575.23	1.3e-63	3	4
ENSHBUP00000033361	S1	PF00575.23	1.3e-63	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000027122	-	5442	XM_005925010	ENSHBUP00000033361	1806 (aa)	XP_005925072	UPI0003BD7C18

Gene Model

Click here to download ENSHBUG00000020226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020226	pdcd11	99	44.574	ENSG00000148843	PDCD11	95	60.212	Homo_sapiens
ENSHBUG00000020226	pdcd11	99	79.846	ENSAPOG00000015629	pdcd11	99	79.768	Acanthochromis_polyacanthus
ENSHBUG00000020226	pdcd11	99	44.362	ENSAMEG00000017935	PDCD11	95	61.257	Ailuropoda_melanoleuca
ENSHBUG00000020226	pdcd11	51	76.573	ENSACIG00000006458	-	99	76.573	Amphilophus_citrinellus
ENSHBUG00000020226	pdcd11	99	80.430	ENSAOCG00000015287	pdcd11	99	79.934	Amphiprion_ocellaris
ENSHBUG00000020226	pdcd11	56	77.030	ENSAPEG00000020240	pdcd11	99	77.030	Amphiprion_percula
ENSHBUG00000020226	pdcd11	100	79.967	ENSATEG00000021043	pdcd11	100	79.967	Anabas_testudineus
ENSHBUG00000020226	pdcd11	99	45.306	ENSACAG00000004796	PDCD11	99	45.415	Anolis_carolinensis
ENSHBUG00000020226	pdcd11	99	44.034	ENSANAG00000034576	PDCD11	76	41.440	Aotus_nancymaae
ENSHBUG00000020226	pdcd11	97	92.059	ENSACLG00000018236	pdcd11	100	93.466	Astatotilapia_calliptera
ENSHBUG00000020226	pdcd11	99	50.430	ENSAMXG00000005458	pdcd11	97	53.510	Astyanax_mexicanus
ENSHBUG00000020226	pdcd11	99	44.462	ENSBTAG00000009715	PDCD11	96	60.950	Bos_taurus
ENSHBUG00000020226	pdcd11	99	43.823	ENSCJAG00000018257	PDCD11	76	41.509	Callithrix_jacchus
ENSHBUG00000020226	pdcd11	99	44.238	ENSCAFG00000010411	PDCD11	96	61.111	Canis_familiaris
ENSHBUG00000020226	pdcd11	99	44.774	ENSCAFG00020010369	PDCD11	96	61.111	Canis_lupus_dingo
ENSHBUG00000020226	pdcd11	99	44.368	ENSCHIG00000025218	PDCD11	95	60.963	Capra_hircus
ENSHBUG00000020226	pdcd11	95	43.697	ENSTSYG00000033423	PDCD11	99	43.257	Carlito_syrichta
ENSHBUG00000020226	pdcd11	92	40.601	ENSCAPG00000005386	PDCD11	99	40.252	Cavia_aperea
ENSHBUG00000020226	pdcd11	99	43.529	ENSCPOG00000010957	PDCD11	99	42.889	Cavia_porcellus
ENSHBUG00000020226	pdcd11	99	43.664	ENSCCAG00000018950	PDCD11	76	41.230	Cebus_capucinus
ENSHBUG00000020226	pdcd11	99	44.444	ENSCATG00000044331	PDCD11	96	59.840	Cercocebus_atys
ENSHBUG00000020226	pdcd11	99	43.827	ENSCLAG00000001029	PDCD11	99	43.576	Chinchilla_lanigera
ENSHBUG00000020226	pdcd11	99	44.439	ENSCSAG00000005346	PDCD11	96	59.840	Chlorocebus_sabaeus
ENSHBUG00000020226	pdcd11	71	68.992	ENSCHOG00000004796	PDCD11	75	68.992	Choloepus_hoffmanni
ENSHBUG00000020226	pdcd11	92	60.623	ENSCPBG00000024487	PDCD11	99	61.207	Chrysemys_picta_bellii
ENSHBUG00000020226	pdcd11	99	44.227	ENSCANG00000043300	PDCD11	96	60.160	Colobus_angolensis_palliatus
ENSHBUG00000020226	pdcd11	99	44.184	ENSCGRG00001006458	Pdcd11	99	43.780	Cricetulus_griseus_chok1gshd
ENSHBUG00000020226	pdcd11	99	44.053	ENSCGRG00000003583	Pdcd11	99	43.650	Cricetulus_griseus_crigri
ENSHBUG00000020226	pdcd11	97	72.506	ENSCSEG00000010739	pdcd11	99	72.506	Cynoglossus_semilaevis
ENSHBUG00000020226	pdcd11	95	75.285	ENSCVAG00000018903	pdcd11	99	74.797	Cyprinodon_variegatus
ENSHBUG00000020226	pdcd11	99	44.309	ENSDNOG00000013838	PDCD11	94	62.108	Dasypus_novemcinctus
ENSHBUG00000020226	pdcd11	99	44.097	ENSDORG00000010420	Pdcd11	99	44.606	Dipodomys_ordii
ENSHBUG00000020226	pdcd11	54	31.476	FBgn0039182	CG5728	74	32.295	Drosophila_melanogaster
ENSHBUG00000020226	pdcd11	90	52.941	ENSETEG00000000813	PDCD11	97	46.226	Echinops_telfairi
ENSHBUG00000020226	pdcd11	72	49.175	ENSEBUG00000002358	-	87	51.812	Eptatretus_burgeri
ENSHBUG00000020226	pdcd11	95	44.883	ENSEASG00005015159	PDCD11	74	42.027	Equus_asinus_asinus
ENSHBUG00000020226	pdcd11	99	44.615	ENSECAG00000020507	PDCD11	75	41.638	Equus_caballus
ENSHBUG00000020226	pdcd11	89	44.565	ENSEEUG00000009245	PDCD11	65	44.565	Erinaceus_europaeus
ENSHBUG00000020226	pdcd11	99	60.493	ENSELUG00000004211	pdcd11	99	60.428	Esox_lucius
ENSHBUG00000020226	pdcd11	99	44.450	ENSFCAG00000002384	PDCD11	95	61.111	Felis_catus
ENSHBUG00000020226	pdcd11	99	44.902	ENSFALG00000008775	PDCD11	99	44.764	Ficedula_albicollis
ENSHBUG00000020226	pdcd11	90	89.369	ENSFHEG00000022997	pdcd11	95	89.369	Fundulus_heteroclitus
ENSHBUG00000020226	pdcd11	93	62.817	ENSGMOG00000004186	pdcd11	94	62.817	Gadus_morhua
ENSHBUG00000020226	pdcd11	77	42.617	ENSGALG00000008265	PDCD11	97	42.617	Gallus_gallus
ENSHBUG00000020226	pdcd11	96	74.484	ENSGAFG00000012806	pdcd11	99	73.271	Gambusia_affinis
ENSHBUG00000020226	pdcd11	99	72.757	ENSGACG00000018233	pdcd11	97	83.508	Gasterosteus_aculeatus
ENSHBUG00000020226	pdcd11	95	47.079	ENSGAGG00000024314	PDCD11	99	46.538	Gopherus_agassizii
ENSHBUG00000020226	pdcd11	99	44.650	ENSGGOG00000011621	PDCD11	96	59.840	Gorilla_gorilla
ENSHBUG00000020226	pdcd11	99	70.468	ENSHCOG00000016006	pdcd11	99	70.374	Hippocampus_comes
ENSHBUG00000020226	pdcd11	63	53.503	ENSIPUG00000015102	pdcd11	99	55.411	Ictalurus_punctatus
ENSHBUG00000020226	pdcd11	99	43.923	ENSSTOG00000014553	PDCD11	99	44.212	Ictidomys_tridecemlineatus
ENSHBUG00000020226	pdcd11	99	45.294	ENSJJAG00000015523	Pdcd11	99	45.241	Jaculus_jaculus
ENSHBUG00000020226	pdcd11	51	70.390	ENSKMAG00000021182	pdcd11	99	70.390	Kryptolebias_marmoratus
ENSHBUG00000020226	pdcd11	99	55.757	ENSLOCG00000011818	pdcd11	99	55.647	Lepisosteus_oculatus
ENSHBUG00000020226	pdcd11	99	44.695	ENSLAFG00000008398	PDCD11	99	44.540	Loxodonta_africana
ENSHBUG00000020226	pdcd11	99	44.174	ENSMFAG00000044058	PDCD11	96	59.840	Macaca_fascicularis
ENSHBUG00000020226	pdcd11	99	44.121	ENSMMUG00000007058	PDCD11	96	59.840	Macaca_mulatta
ENSHBUG00000020226	pdcd11	99	44.280	ENSMNEG00000040726	PDCD11	96	59.574	Macaca_nemestrina
ENSHBUG00000020226	pdcd11	99	79.217	ENSMAMG00000009572	pdcd11	99	79.162	Mastacembelus_armatus
ENSHBUG00000020226	pdcd11	100	99.391	ENSMZEG00005008949	pdcd11	100	99.391	Maylandia_zebra
ENSHBUG00000020226	pdcd11	99	44.533	ENSMGAG00000010482	PDCD11	96	58.839	Meleagris_gallopavo
ENSHBUG00000020226	pdcd11	91	47.139	ENSMAUG00000014924	Pdcd11	94	60.000	Mesocricetus_auratus
ENSHBUG00000020226	pdcd11	99	44.628	ENSMICG00000012421	PDCD11	76	41.999	Microcebus_murinus
ENSHBUG00000020226	pdcd11	99	44.248	ENSMOCG00000021792	Pdcd11	95	60.106	Microtus_ochrogaster
ENSHBUG00000020226	pdcd11	99	62.854	ENSMMOG00000007572	pdcd11	97	70.659	Mola_mola
ENSHBUG00000020226	pdcd11	93	50.607	ENSMODG00000011077	PDCD11	95	61.067	Monodelphis_domestica
ENSHBUG00000020226	pdcd11	99	64.975	ENSMALG00000003859	pdcd11	99	73.319	Monopterus_albus
ENSHBUG00000020226	pdcd11	99	44.159	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.677	Mus_caroli
ENSHBUG00000020226	pdcd11	99	43.817	ENSMUSG00000025047	Pdcd11	99	43.970	Mus_musculus
ENSHBUG00000020226	pdcd11	99	44.094	MGP_SPRETEiJ_G0023971	Pdcd11	99	44.177	Mus_spretus
ENSHBUG00000020226	pdcd11	99	44.509	ENSMPUG00000016829	PDCD11	95	61.968	Mustela_putorius_furo
ENSHBUG00000020226	pdcd11	99	44.180	ENSMLUG00000004997	PDCD11	96	60.582	Myotis_lucifugus
ENSHBUG00000020226	pdcd11	99	43.932	ENSNGAG00000018143	Pdcd11	99	43.499	Nannospalax_galili
ENSHBUG00000020226	pdcd11	85	95.847	ENSNBRG00000021596	pdcd11	99	89.415	Neolamprologus_brichardi
ENSHBUG00000020226	pdcd11	99	42.910	ENSNLEG00000026700	PDCD11	95	59.309	Nomascus_leucogenys
ENSHBUG00000020226	pdcd11	70	67.111	ENSMEUG00000013719	-	61	67.111	Notamacropus_eugenii
ENSHBUG00000020226	pdcd11	99	45.070	ENSOPRG00000010593	PDCD11	93	60.000	Ochotona_princeps
ENSHBUG00000020226	pdcd11	99	43.663	ENSODEG00000008079	PDCD11	99	43.397	Octodon_degus
ENSHBUG00000020226	pdcd11	100	97.065	ENSONIG00000018835	pdcd11	100	97.065	Oreochromis_niloticus
ENSHBUG00000020226	pdcd11	99	43.072	ENSOANG00000001636	-	99	43.072	Ornithorhynchus_anatinus
ENSHBUG00000020226	pdcd11	99	44.127	ENSOCUG00000006312	PDCD11	99	43.810	Oryctolagus_cuniculus
ENSHBUG00000020226	pdcd11	99	74.449	ENSORLG00020003642	pdcd11	99	74.339	Oryzias_latipes_hni
ENSHBUG00000020226	pdcd11	99	74.766	ENSORLG00015001618	pdcd11	99	74.325	Oryzias_latipes_hsok
ENSHBUG00000020226	pdcd11	73	74.533	ENSOMEG00000010904	pdcd11	98	74.087	Oryzias_melastigma
ENSHBUG00000020226	pdcd11	99	44.216	ENSOARG00000003719	PDCD11	95	60.477	Ovis_aries
ENSHBUG00000020226	pdcd11	99	44.015	ENSPPAG00000024593	PDCD11	95	60.106	Pan_paniscus
ENSHBUG00000020226	pdcd11	99	44.715	ENSPPRG00000015133	PDCD11	95	61.111	Panthera_pardus
ENSHBUG00000020226	pdcd11	99	44.609	ENSPTIG00000011433	PDCD11	95	61.170	Panthera_tigris_altaica
ENSHBUG00000020226	pdcd11	99	44.650	ENSPTRG00000002911	PDCD11	95	60.106	Pan_troglodytes
ENSHBUG00000020226	pdcd11	99	44.492	ENSPANG00000020959	PDCD11	96	59.309	Papio_anubis
ENSHBUG00000020226	pdcd11	99	55.789	ENSPKIG00000000973	pdcd11	99	55.702	Paramormyrops_kingsleyae
ENSHBUG00000020226	pdcd11	78	43.590	ENSPSIG00000005102	PDCD11	93	44.099	Pelodiscus_sinensis
ENSHBUG00000020226	pdcd11	70	82.595	ENSPMGG00000007289	pdcd11	96	81.173	Periophthalmus_magnuspinnatus
ENSHBUG00000020226	pdcd11	99	44.044	ENSPEMG00000010315	Pdcd11	96	60.000	Peromyscus_maniculatus_bairdii
ENSHBUG00000020226	pdcd11	99	43.188	ENSPCIG00000001118	PDCD11	95	59.249	Phascolarctos_cinereus
ENSHBUG00000020226	pdcd11	99	72.903	ENSPFOG00000006012	pdcd11	99	72.893	Poecilia_formosa
ENSHBUG00000020226	pdcd11	97	75.194	ENSPLAG00000014494	pdcd11	99	74.845	Poecilia_latipinna
ENSHBUG00000020226	pdcd11	90	66.306	ENSPMEG00000018177	pdcd11	99	72.527	Poecilia_mexicana
ENSHBUG00000020226	pdcd11	99	72.332	ENSPREG00000000475	pdcd11	99	72.418	Poecilia_reticulata
ENSHBUG00000020226	pdcd11	99	41.282	ENSPPYG00000002621	PDCD11	95	59.309	Pongo_abelii
ENSHBUG00000020226	pdcd11	99	40.549	ENSPCOG00000023327	PDCD11	74	61.960	Propithecus_coquereli
ENSHBUG00000020226	pdcd11	99	43.743	ENSPVAG00000004176	PDCD11	75	40.979	Pteropus_vampyrus
ENSHBUG00000020226	pdcd11	100	99.280	ENSPNYG00000003979	pdcd11	100	99.280	Pundamilia_nyererei
ENSHBUG00000020226	pdcd11	95	56.889	ENSPNAG00000017225	pdcd11	99	56.946	Pygocentrus_nattereri
ENSHBUG00000020226	pdcd11	99	43.554	ENSRNOG00000020304	Pdcd11	96	60.800	Rattus_norvegicus
ENSHBUG00000020226	pdcd11	99	44.280	ENSRBIG00000011889	PDCD11	96	59.893	Rhinopithecus_bieti
ENSHBUG00000020226	pdcd11	99	44.280	ENSRROG00000030483	PDCD11	96	60.160	Rhinopithecus_roxellana
ENSHBUG00000020226	pdcd11	95	34.503	YMR229C	-	95	42.814	Saccharomyces_cerevisiae
ENSHBUG00000020226	pdcd11	99	37.029	ENSSBOG00000030308	PDCD11	74	31.790	Saimiri_boliviensis_boliviensis
ENSHBUG00000020226	pdcd11	99	42.637	ENSSHAG00000018258	PDCD11	95	57.373	Sarcophilus_harrisii
ENSHBUG00000020226	pdcd11	99	56.298	ENSSFOG00015003881	pdcd11	99	56.060	Scleropages_formosus
ENSHBUG00000020226	pdcd11	99	77.986	ENSSMAG00000006612	pdcd11	99	78.103	Scophthalmus_maximus
ENSHBUG00000020226	pdcd11	97	71.654	ENSSDUG00000021302	pdcd11	99	74.046	Seriola_dumerili
ENSHBUG00000020226	pdcd11	50	78.108	ENSSLDG00000010228	pdcd11	99	78.658	Seriola_lalandi_dorsalis
ENSHBUG00000020226	pdcd11	76	67.347	ENSSARG00000002540	PDCD11	63	67.347	Sorex_araneus
ENSHBUG00000020226	pdcd11	97	79.160	ENSSPAG00000017558	pdcd11	100	79.136	Stegastes_partitus
ENSHBUG00000020226	pdcd11	99	44.609	ENSSSCG00000010599	PDCD11	99	44.778	Sus_scrofa
ENSHBUG00000020226	pdcd11	71	70.164	ENSTRUG00000014291	pdcd11	100	70.164	Takifugu_rubripes
ENSHBUG00000020226	pdcd11	100	70.241	ENSTNIG00000012085	pdcd11	100	70.295	Tetraodon_nigroviridis
ENSHBUG00000020226	pdcd11	97	61.272	ENSTBEG00000001893	PDCD11	94	61.272	Tupaia_belangeri
ENSHBUG00000020226	pdcd11	99	41.570	ENSTTRG00000003356	PDCD11	95	56.764	Tursiops_truncatus
ENSHBUG00000020226	pdcd11	99	44.301	ENSUAMG00000018015	PDCD11	95	61.478	Ursus_americanus
ENSHBUG00000020226	pdcd11	99	43.328	ENSUMAG00000023567	PDCD11	95	61.478	Ursus_maritimus
ENSHBUG00000020226	pdcd11	64	47.778	ENSVPAG00000007405	PDCD11	72	47.778	Vicugna_pacos
ENSHBUG00000020226	pdcd11	99	44.185	ENSVVUG00000004457	PDCD11	96	61.111	Vulpes_vulpes
ENSHBUG00000020226	pdcd11	99	44.238	ENSXETG00000009482	pdcd11	99	43.919	Xenopus_tropicalis
ENSHBUG00000020226	pdcd11	99	61.335	ENSXCOG00000012420	pdcd11	99	61.377	Xiphophorus_couchianus
ENSHBUG00000020226	pdcd11	99	73.344	ENSXMAG00000004638	pdcd11	99	73.513	Xiphophorus_maculatus