EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000020302 (Gene tree)
Gene ID: 102297162
Gene Symbol: snx25
Alias: -
Full Name: sorting nexin 25
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 16787 bases
Position: chrJH425730.1:80381-97167
Accession: 102297162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033374	Isy1	PF06246.12	0.00064	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000027156	-	2535	XM_005944285	ENSHBUP00000033374	844 (aa)	XP_005944347	-

Gene Model

Click here to download ENSHBUG00000020302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020302	snx25	96	97.171	ENSACIG00000022335	snx25	98	97.171	Amphilophus_citrinellus
ENSHBUG00000020302	snx25	100	99.176	ENSACLG00000020812	snx25	100	99.176	Astatotilapia_calliptera
ENSHBUG00000020302	snx25	98	89.499	ENSCVAG00000020558	snx25	99	90.453	Cyprinodon_variegatus
ENSHBUG00000020302	snx25	70	88.742	ENSGAFG00000015334	snx25	79	88.742	Gambusia_affinis
ENSHBUG00000020302	snx25	97	70.238	ENSIPUG00000020587	snx25	86	70.588	Ictalurus_punctatus
ENSHBUG00000020302	snx25	97	92.400	ENSLBEG00000014990	snx25	100	91.556	Labrus_bergylta
ENSHBUG00000020302	snx25	100	99.763	ENSMZEG00005005079	snx25	100	99.763	Maylandia_zebra
ENSHBUG00000020302	snx25	97	89.867	ENSMALG00000013142	snx25	99	89.747	Monopterus_albus
ENSHBUG00000020302	snx25	97	88.969	ENSPMEG00000007381	snx25	85	88.969	Poecilia_mexicana
ENSHBUG00000020302	snx25	100	99.176	ENSPNYG00000000032	snx25	100	99.176	Pundamilia_nyererei
ENSHBUG00000020302	snx25	97	69.185	ENSSFOG00015020775	SNX25	88	68.465	Scleropages_formosus
ENSHBUG00000020302	snx25	97	91.687	ENSSMAG00000014099	snx25	99	90.843	Scophthalmus_maximus
ENSHBUG00000020302	snx25	95	93.980	ENSSDUG00000014434	snx25	100	93.857	Seriola_dumerili
ENSHBUG00000020302	snx25	97	89.651	ENSXMAG00000003919	snx25	99	90.614	Xiphophorus_maculatus