EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000020364 (Gene tree)
Gene ID: 102297082
Gene Symbol: srrm1
Alias: wu:fb34f04|wu:fb38b06|zgc:63802
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 6446 bases
Position: chrJH425369.1:1019488-1025933
Accession: 102297082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033450	PWI	PF01480.17	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000027288	-	3342	XM_005922309	ENSHBUP00000033450	784 (aa)	XP_005922371	UPI0003BD6A2A

Gene Model

Click here to download ENSHBUG00000020364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020364	srrm1	63	79.000	ENSAPOG00000001170	srrm1	58	82.000	Acanthochromis_polyacanthus
ENSHBUG00000020364	srrm1	63	79.400	ENSAOCG00000021757	srrm1	58	82.800	Amphiprion_ocellaris
ENSHBUG00000020364	srrm1	63	78.800	ENSAPEG00000018964	srrm1	58	82.200	Amphiprion_percula
ENSHBUG00000020364	srrm1	76	62.559	ENSDARG00000001244	srrm1	64	62.637	Danio_rerio
ENSHBUG00000020364	srrm1	63	77.200	ENSLBEG00000013936	srrm1	58	80.800	Labrus_bergylta
ENSHBUG00000020364	srrm1	100	79.367	ENSMAMG00000010305	srrm1	58	80.400	Mastacembelus_armatus
ENSHBUG00000020364	srrm1	99	98.340	ENSONIG00000008206	srrm1	84	98.340	Oreochromis_niloticus
ENSHBUG00000020364	srrm1	60	55.959	ENSPKIG00000008252	srrm1	53	67.876	Paramormyrops_kingsleyae
ENSHBUG00000020364	srrm1	63	82.800	ENSSPAG00000009507	srrm1	58	82.800	Stegastes_partitus