EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000020369 (Gene tree)
Gene ID: 102305259
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 35399 bases
Position: chrJH425833.1:237170-272568
Accession: 102305259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000018294	Tudor-knot	PF11717.8	2.4e-10	1	1
ENSHBUP00000018280	Tudor-knot	PF11717.8	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000035022	-	3946	-	ENSHBUP00000018280	1300 (aa)	-	-
ENSHBUT00000027295	-	3925	XM_005946840	ENSHBUP00000018294	1293 (aa)	XP_005946902	UPI0003BC6067

Gene Model

Click here to download ENSHBUG00000020369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020369	tomm20a	67	74.757	ENSG00000054267	ARID4B	89	74.757	Homo_sapiens
ENSHBUG00000020369	tomm20a	100	89.977	ENSAPOG00000010823	tomm20a	100	89.441	Acanthochromis_polyacanthus
ENSHBUG00000020369	tomm20a	88	66.594	ENSAMEG00000008801	ARID4B	99	51.608	Ailuropoda_melanoleuca
ENSHBUG00000020369	tomm20a	94	95.035	ENSACIG00000006313	tomm20a	100	95.035	Amphilophus_citrinellus
ENSHBUG00000020369	tomm20a	100	89.518	ENSAOCG00000003330	tomm20a	100	89.135	Amphiprion_ocellaris
ENSHBUG00000020369	tomm20a	100	89.288	ENSAPEG00000024018	tomm20a	100	88.906	Amphiprion_percula
ENSHBUG00000020369	tomm20a	100	86.305	ENSATEG00000014930	tomm20a	100	85.998	Anabas_testudineus
ENSHBUG00000020369	tomm20a	52	60.420	ENSACAG00000001289	ARID4B	99	51.517	Anolis_carolinensis
ENSHBUG00000020369	tomm20a	94	94.228	ENSACLG00000023521	tomm20a	100	94.228	Astatotilapia_calliptera
ENSHBUG00000020369	tomm20a	83	77.482	ENSAMXG00000003657	tomm20a	91	77.240	Astyanax_mexicanus
ENSHBUG00000020369	tomm20a	100	50.249	ENSBTAG00000000222	ARID4B	54	60.803	Bos_taurus
ENSHBUG00000020369	tomm20a	99	49.171	ENSCHIG00000020742	ARID4B	99	50.294	Capra_hircus
ENSHBUG00000020369	tomm20a	99	51.090	ENSCPOG00000034766	ARID4B	99	50.182	Cavia_porcellus
ENSHBUG00000020369	tomm20a	89	59.695	ENSCPBG00000004501	ARID4B	99	51.369	Chrysemys_picta_bellii
ENSHBUG00000020369	tomm20a	99	80.775	ENSCSEG00000012928	tomm20a	99	81.318	Cynoglossus_semilaevis
ENSHBUG00000020369	tomm20a	100	80.507	ENSCVAG00000003244	tomm20a	100	80.737	Cyprinodon_variegatus
ENSHBUG00000020369	tomm20a	100	65.504	ENSDARG00000090656	tomm20a	99	65.509	Danio_rerio
ENSHBUG00000020369	tomm20a	99	51.093	ENSDORG00000006422	Arid4b	99	51.284	Dipodomys_ordii
ENSHBUG00000020369	tomm20a	80	78.846	ENSETEG00000005596	ARID4B	84	78.846	Echinops_telfairi
ENSHBUG00000020369	tomm20a	69	54.054	ENSELUG00000018441	tomm20a	91	55.088	Esox_lucius
ENSHBUG00000020369	tomm20a	100	82.047	ENSFHEG00000003798	tomm20a	100	81.895	Fundulus_heteroclitus
ENSHBUG00000020369	tomm20a	90	74.902	ENSGMOG00000018747	tomm20a	91	74.510	Gadus_morhua
ENSHBUG00000020369	tomm20a	99	77.693	ENSGACG00000004298	tomm20a	100	78.149	Gasterosteus_aculeatus
ENSHBUG00000020369	tomm20a	100	51.265	ENSHGLG00000012546	ARID4B	54	59.807	Heterocephalus_glaber_female
ENSHBUG00000020369	tomm20a	100	51.265	ENSHGLG00100015436	ARID4B	54	59.807	Heterocephalus_glaber_male
ENSHBUG00000020369	tomm20a	95	84.061	ENSHCOG00000010376	tomm20a	100	83.406	Hippocampus_comes
ENSHBUG00000020369	tomm20a	100	62.557	ENSIPUG00000014234	arid4b	99	63.552	Ictalurus_punctatus
ENSHBUG00000020369	tomm20a	100	52.003	ENSJJAG00000021368	Arid4b	99	52.174	Jaculus_jaculus
ENSHBUG00000020369	tomm20a	91	75.895	ENSKMAG00000010987	tomm20a	98	76.372	Kryptolebias_marmoratus
ENSHBUG00000020369	tomm20a	100	60.287	ENSLOCG00000015899	tomm20a	99	60.823	Lepisosteus_oculatus
ENSHBUG00000020369	tomm20a	53	60.248	ENSLAFG00000014295	ARID4B	99	50.799	Loxodonta_africana
ENSHBUG00000020369	tomm20a	93	85.985	ENSMAMG00000017134	tomm20a	99	85.833	Mastacembelus_armatus
ENSHBUG00000020369	tomm20a	100	99.845	ENSMZEG00005009879	tomm20a	100	99.845	Maylandia_zebra
ENSHBUG00000020369	tomm20a	53	60.839	ENSMICG00000016358	ARID4B	55	60.027	Microcebus_murinus
ENSHBUG00000020369	tomm20a	93	86.623	ENSMMOG00000000561	tomm20a	98	85.526	Mola_mola
ENSHBUG00000020369	tomm20a	100	86.713	ENSMALG00000005205	tomm20a	100	86.559	Monopterus_albus
ENSHBUG00000020369	tomm20a	94	96.934	ENSNBRG00000019684	tomm20a	100	96.934	Neolamprologus_brichardi
ENSHBUG00000020369	tomm20a	100	77.659	ENSORLG00000012510	tomm20a	100	76.970	Oryzias_latipes
ENSHBUG00000020369	tomm20a	92	84.450	ENSORLG00020013988	tomm20a	100	85.514	Oryzias_latipes_hni
ENSHBUG00000020369	tomm20a	92	84.856	ENSORLG00015022835	tomm20a	100	85.446	Oryzias_latipes_hsok
ENSHBUG00000020369	tomm20a	100	78.281	ENSOMEG00000000521	tomm20a	100	77.820	Oryzias_melastigma
ENSHBUG00000020369	tomm20a	99	50.362	ENSOARG00000003481	ARID4B	97	51.822	Ovis_aries
ENSHBUG00000020369	tomm20a	54	60.219	ENSPPRG00000013739	ARID4B	99	51.351	Panthera_pardus
ENSHBUG00000020369	tomm20a	54	60.627	ENSPTIG00000012520	ARID4B	99	52.491	Panthera_tigris_altaica
ENSHBUG00000020369	tomm20a	93	49.119	ENSPSIG00000011632	ARID4B	99	49.216	Pelodiscus_sinensis
ENSHBUG00000020369	tomm20a	52	73.684	ENSPMGG00000001596	tomm20a	89	74.436	Periophthalmus_magnuspinnatus
ENSHBUG00000020369	tomm20a	100	51.540	ENSPCIG00000029756	ARID4B	99	53.127	Phascolarctos_cinereus
ENSHBUG00000020369	tomm20a	100	81.617	ENSPFOG00000019430	tomm20a	100	81.465	Poecilia_formosa
ENSHBUG00000020369	tomm20a	100	81.465	ENSPLAG00000010554	tomm20a	100	81.236	Poecilia_latipinna
ENSHBUG00000020369	tomm20a	100	79.537	ENSPMEG00000003093	tomm20a	100	75.595	Poecilia_mexicana
ENSHBUG00000020369	tomm20a	100	81.728	ENSPREG00000007996	tomm20a	100	81.575	Poecilia_reticulata
ENSHBUG00000020369	tomm20a	53	61.655	ENSPVAG00000015159	ARID4B	99	50.108	Pteropus_vampyrus
ENSHBUG00000020369	tomm20a	99	92.736	ENSPNYG00000013988	tomm20a	100	92.736	Pundamilia_nyererei
ENSHBUG00000020369	tomm20a	100	66.239	ENSPNAG00000000523	tomm20a	92	65.798	Pygocentrus_nattereri
ENSHBUG00000020369	tomm20a	90	72.660	ENSRBIG00000042029	ARID4B	96	47.549	Rhinopithecus_bieti
ENSHBUG00000020369	tomm20a	53	59.569	ENSSHAG00000015214	ARID4B	99	51.369	Sarcophilus_harrisii
ENSHBUG00000020369	tomm20a	75	50.842	ENSSFOG00015008923	tomm20a	98	52.328	Scleropages_formosus
ENSHBUG00000020369	tomm20a	100	61.567	ENSSFOG00015000132	arid4b	99	61.879	Scleropages_formosus
ENSHBUG00000020369	tomm20a	100	83.621	ENSSMAG00000010430	tomm20a	100	84.373	Scophthalmus_maximus
ENSHBUG00000020369	tomm20a	100	88.880	ENSSDUG00000003019	tomm20a	100	88.344	Seriola_dumerili
ENSHBUG00000020369	tomm20a	100	89.204	ENSSPAG00000007358	tomm20a	100	88.821	Stegastes_partitus
ENSHBUG00000020369	tomm20a	53	60.744	ENSSSCG00000010156	ARID4B	62	60.414	Sus_scrofa
ENSHBUG00000020369	tomm20a	69	73.216	ENSTRUG00000002893	tomm20a	100	72.558	Takifugu_rubripes
ENSHBUG00000020369	tomm20a	70	67.640	ENSTBEG00000003961	ARID4B	67	67.397	Tupaia_belangeri
ENSHBUG00000020369	tomm20a	100	50.248	ENSTTRG00000002228	ARID4B	99	51.717	Tursiops_truncatus
ENSHBUG00000020369	tomm20a	68	58.380	ENSVPAG00000006841	ARID4B	68	58.543	Vicugna_pacos
ENSHBUG00000020369	tomm20a	100	49.816	ENSXETG00000024651	arid4b	85	54.497	Xenopus_tropicalis
ENSHBUG00000020369	tomm20a	100	82.488	ENSXMAG00000006538	tomm20a	100	81.951	Xiphophorus_maculatus