EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000020412 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 2889 bases
Position: chrJH425383.1:1636588-1639476
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033230	RVT_1	PF00078.27	1.8e-22	1	1
ENSHBUP00000017959	RVT_1	PF00078.27	1.8e-22	1	1
ENSHBUP00000033183	RVT_1	PF00078.27	1.8e-22	1	1
ENSHBUP00000018060	SART-1	PF03343.13	2.7e-28	1	1
ENSHBUP00000033230	SART-1	PF03343.13	3.4e-28	1	1
ENSHBUP00000017959	SART-1	PF03343.13	4.9e-27	1	2
ENSHBUP00000017959	SART-1	PF03343.13	4.9e-27	2	2
ENSHBUP00000033183	SART-1	PF03343.13	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034880	-	1599	-	ENSHBUP00000033230	532 (aa)	-	-
ENSHBUT00000026767	-	1578	-	ENSHBUP00000033183	525 (aa)	-	-
ENSHBUT00000026985	-	1485	-	ENSHBUP00000018060	494 (aa)	-	-
ENSHBUT00000026859	-	1599	-	ENSHBUP00000017959	532 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000020412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020412	-	70	52.074	ENSG00000175467	SART1	56	54.545	Homo_sapiens
ENSHBUG00000020412	-	70	52.336	ENSAMEG00000017260	SART1	64	54.382	Ailuropoda_melanoleuca
ENSHBUG00000020412	-	70	52.083	ENSANAG00000037219	SART1	57	53.898	Aotus_nancymaae
ENSHBUG00000020412	-	70	53.023	ENSBTAG00000003094	SART1	57	54.212	Bos_taurus
ENSHBUG00000020412	-	70	51.852	ENSCJAG00000001741	SART1	56	54.566	Callithrix_jacchus
ENSHBUG00000020412	-	70	52.765	ENSCAFG00000013103	SART1	56	54.324	Canis_familiaris
ENSHBUG00000020412	-	70	52.765	ENSCAFG00020015337	SART1	56	54.324	Canis_lupus_dingo
ENSHBUG00000020412	-	70	53.023	ENSCHIG00000016364	SART1	57	53.696	Capra_hircus
ENSHBUG00000020412	-	73	52.164	ENSTSYG00000029994	SART1	61	54.214	Carlito_syrichta
ENSHBUG00000020412	-	70	51.613	ENSCAPG00000016369	SART1	64	53.478	Cavia_aperea
ENSHBUG00000020412	-	70	51.152	ENSCPOG00000020882	SART1	64	53.642	Cavia_porcellus
ENSHBUG00000020412	-	70	52.083	ENSCCAG00000037852	SART1	56	54.566	Cebus_capucinus
ENSHBUG00000020412	-	70	53.226	ENSCATG00000032953	SART1	56	53.556	Cercocebus_atys
ENSHBUG00000020412	-	70	51.591	ENSCLAG00000016593	SART1	56	53.642	Chinchilla_lanigera
ENSHBUG00000020412	-	70	54.839	ENSCSAG00000008081	SART1	56	54.000	Chlorocebus_sabaeus
ENSHBUG00000020412	-	71	52.477	ENSCPBG00000023434	SART1	55	53.778	Chrysemys_picta_bellii
ENSHBUG00000020412	-	62	49.231	ENSCANG00000043164	SART1	53	49.877	Colobus_angolensis_palliatus
ENSHBUG00000020412	-	68	52.246	ENSCGRG00001021367	Sart1	56	52.980	Cricetulus_griseus_chok1gshd
ENSHBUG00000020412	-	68	51.111	ENSCGRG00000015292	Sart1	63	53.097	Cricetulus_griseus_crigri
ENSHBUG00000020412	-	70	61.538	ENSCVAG00000009800	SART1	58	61.745	Cyprinodon_variegatus
ENSHBUG00000020412	-	53	46.894	ENSDNOG00000041860	-	57	44.474	Dasypus_novemcinctus
ENSHBUG00000020412	-	70	54.233	ENSDORG00000011887	Sart1	60	53.965	Dipodomys_ordii
ENSHBUG00000020412	-	71	41.365	ENSEBUG00000006203	SART1	81	41.719	Eptatretus_burgeri
ENSHBUG00000020412	-	70	52.304	ENSEASG00005004465	SART1	56	53.880	Equus_asinus_asinus
ENSHBUG00000020412	-	70	52.074	ENSECAG00000023491	TSGA10IP	52	53.659	Equus_caballus
ENSHBUG00000020412	-	70	52.900	ENSFCAG00000013278	SART1	56	54.018	Felis_catus
ENSHBUG00000020412	-	70	52.074	ENSFDAG00000008891	SART1	57	53.556	Fukomys_damarensis
ENSHBUG00000020412	-	70	61.792	ENSFHEG00000010334	SART1	58	60.538	Fundulus_heteroclitus
ENSHBUG00000020412	-	70	62.411	ENSGAFG00000013919	SART1	58	61.124	Gambusia_affinis
ENSHBUG00000020412	-	70	60.952	ENSGACG00000016951	SART1	56	60.550	Gasterosteus_aculeatus
ENSHBUG00000020412	-	71	54.587	ENSGAGG00000022783	SART1	55	53.915	Gopherus_agassizii
ENSHBUG00000020412	-	70	52.074	ENSGGOG00000009457	SART1	57	53.761	Gorilla_gorilla
ENSHBUG00000020412	-	70	51.382	ENSHGLG00000015022	SART1	56	52.667	Heterocephalus_glaber_female
ENSHBUG00000020412	-	70	51.515	ENSHGLG00100018346	SART1	55	53.708	Heterocephalus_glaber_male
ENSHBUG00000020412	-	70	61.033	ENSHCOG00000007259	SART1	57	59.867	Hippocampus_comes
ENSHBUG00000020412	-	70	61.321	ENSIPUG00000021117	sart1	65	54.183	Ictalurus_punctatus
ENSHBUG00000020412	-	70	52.204	ENSSTOG00000023375	SART1	56	54.425	Ictidomys_tridecemlineatus
ENSHBUG00000020412	-	70	54.273	ENSJJAG00000019103	Sart1	56	53.778	Jaculus_jaculus
ENSHBUG00000020412	-	70	48.000	ENSLACG00000011165	SART1	67	49.206	Latimeria_chalumnae
ENSHBUG00000020412	-	71	54.630	ENSLOCG00000001871	SART1	90	55.111	Lepisosteus_oculatus
ENSHBUG00000020412	-	70	53.333	ENSLAFG00000001768	SART1	59	54.667	Loxodonta_africana
ENSHBUG00000020412	-	70	53.456	ENSMFAG00000002484	SART1	57	53.111	Macaca_fascicularis
ENSHBUG00000020412	-	70	53.226	ENSMNEG00000035507	SART1	56	53.556	Macaca_nemestrina
ENSHBUG00000020412	-	70	53.226	ENSMLEG00000036259	SART1	61	53.556	Mandrillus_leucophaeus
ENSHBUG00000020412	-	70	50.922	ENSMAUG00000016274	Sart1	56	53.540	Mesocricetus_auratus
ENSHBUG00000020412	-	70	52.668	ENSMICG00000030096	SART1	57	54.120	Microcebus_murinus
ENSHBUG00000020412	-	70	51.613	ENSMOCG00000019815	Sart1	56	53.540	Microtus_ochrogaster
ENSHBUG00000020412	-	70	63.095	ENSMMOG00000004019	SART1	67	56.972	Mola_mola
ENSHBUG00000020412	-	70	54.042	ENSMODG00000009047	SART1	66	45.631	Monodelphis_domestica
ENSHBUG00000020412	-	68	52.889	MGP_CAROLIEiJ_G0022545	Sart1	56	52.889	Mus_caroli
ENSHBUG00000020412	-	68	52.889	ENSMUSG00000039148	Sart1	56	52.889	Mus_musculus
ENSHBUG00000020412	-	68	53.111	MGP_PahariEiJ_G0014042	Sart1	56	53.111	Mus_pahari
ENSHBUG00000020412	-	68	52.889	MGP_SPRETEiJ_G0023459	Sart1	56	52.889	Mus_spretus
ENSHBUG00000020412	-	70	52.900	ENSMPUG00000011394	SART1	56	54.464	Mustela_putorius_furo
ENSHBUG00000020412	-	70	50.917	ENSMLUG00000011078	SART1	56	52.434	Myotis_lucifugus
ENSHBUG00000020412	-	68	50.993	ENSNGAG00000004727	Sart1	58	53.540	Nannospalax_galili
ENSHBUG00000020412	-	70	53.917	ENSNLEG00000005961	SART1	57	54.545	Nomascus_leucogenys
ENSHBUG00000020412	-	51	57.186	ENSMEUG00000004918	SART1	55	50.673	Notamacropus_eugenii
ENSHBUG00000020412	-	70	51.945	ENSODEG00000017777	SART1	56	53.863	Octodon_degus
ENSHBUG00000020412	-	70	71.905	ENSONIG00000021283	SART1	57	70.642	Oreochromis_niloticus
ENSHBUG00000020412	-	71	60.706	ENSORLG00000028400	SART1	56	60.460	Oryzias_latipes
ENSHBUG00000020412	-	71	60.471	ENSORLG00020014721	SART1	56	60.230	Oryzias_latipes_hni
ENSHBUG00000020412	-	71	60.706	ENSORLG00015014467	SART1	56	60.460	Oryzias_latipes_hsok
ENSHBUG00000020412	-	71	62.676	ENSOMEG00000002508	SART1	56	62.156	Oryzias_melastigma
ENSHBUG00000020412	-	70	51.382	ENSOGAG00000016523	SART1	55	54.444	Otolemur_garnettii
ENSHBUG00000020412	-	70	52.315	ENSOARG00000000694	SART1	71	46.108	Ovis_aries
ENSHBUG00000020412	-	70	52.765	ENSPPAG00000030167	SART1	57	54.324	Pan_paniscus
ENSHBUG00000020412	-	70	51.740	ENSPPRG00000015794	SART1	55	53.125	Panthera_pardus
ENSHBUG00000020412	-	58	40.453	ENSPTIG00000017833	SART1	53	40.240	Panthera_tigris_altaica
ENSHBUG00000020412	-	70	52.765	ENSPTRG00000003905	SART1	57	54.324	Pan_troglodytes
ENSHBUG00000020412	-	70	53.226	ENSPANG00000023502	SART1	56	53.556	Papio_anubis
ENSHBUG00000020412	-	71	52.902	ENSPSIG00000002712	SART1	57	52.941	Pelodiscus_sinensis
ENSHBUG00000020412	-	70	51.152	ENSPEMG00000012166	Sart1	60	53.540	Peromyscus_maniculatus_bairdii
ENSHBUG00000020412	-	51	45.349	ENSPMAG00000005488	SART1	100	43.365	Petromyzon_marinus
ENSHBUG00000020412	-	70	54.186	ENSPCIG00000008311	SART1	55	53.915	Phascolarctos_cinereus
ENSHBUG00000020412	-	70	62.736	ENSPFOG00000019883	SART1	58	61.745	Poecilia_formosa
ENSHBUG00000020412	-	70	62.264	ENSPLAG00000019633	SART1	58	61.298	Poecilia_latipinna
ENSHBUG00000020412	-	70	62.500	ENSPMEG00000013621	SART1	58	61.745	Poecilia_mexicana
ENSHBUG00000020412	-	70	60.993	ENSPREG00000000100	SART1	57	59.775	Poecilia_reticulata
ENSHBUG00000020412	-	70	52.074	ENSPPYG00000003039	SART1	57	54.545	Pongo_abelii
ENSHBUG00000020412	-	70	52.204	ENSPCOG00000008448	SART1	55	54.139	Propithecus_coquereli
ENSHBUG00000020412	-	70	46.744	ENSPVAG00000016969	SART1	55	47.865	Pteropus_vampyrus
ENSHBUG00000020412	-	70	71.667	ENSPNYG00000014765	SART1	57	70.413	Pundamilia_nyererei
ENSHBUG00000020412	-	68	51.333	ENSRNOG00000020475	Sart1	56	52.863	Rattus_norvegicus
ENSHBUG00000020412	-	70	53.226	ENSRBIG00000044079	SART1	56	53.556	Rhinopithecus_bieti
ENSHBUG00000020412	-	70	53.226	ENSRROG00000045251	SART1	56	53.556	Rhinopithecus_roxellana
ENSHBUG00000020412	-	70	52.083	ENSSBOG00000023102	SART1	57	54.120	Saimiri_boliviensis_boliviensis
ENSHBUG00000020412	-	70	54.292	ENSSHAG00000011437	SART1	58	53.795	Sarcophilus_harrisii
ENSHBUG00000020412	-	70	58.255	ENSSFOG00015018792	SART1	58	56.818	Scleropages_formosus
ENSHBUG00000020412	-	70	61.916	ENSSMAG00000001043	SART1	57	61.937	Scophthalmus_maximus
ENSHBUG00000020412	-	70	67.381	ENSSDUG00000019131	SART1	59	66.514	Seriola_dumerili
ENSHBUG00000020412	-	70	67.619	ENSSLDG00000024307	SART1	57	66.743	Seriola_lalandi_dorsalis
ENSHBUG00000020412	-	71	52.242	ENSSPUG00000009399	SART1	57	52.954	Sphenodon_punctatus
ENSHBUG00000020412	-	70	66.429	ENSSPAG00000013156	SART1	57	65.596	Stegastes_partitus
ENSHBUG00000020412	-	73	50.830	ENSSSCG00000012963	SART1	60	52.490	Sus_scrofa
ENSHBUG00000020412	-	70	63.895	ENSTRUG00000025047	SART1	65	57.654	Takifugu_rubripes
ENSHBUG00000020412	-	70	44.988	ENSTBEG00000002397	-	58	45.662	Tupaia_belangeri
ENSHBUG00000020412	-	70	52.765	ENSTTRG00000008751	SART1	55	54.222	Tursiops_truncatus
ENSHBUG00000020412	-	70	55.035	ENSUAMG00000020770	SART1	58	54.505	Ursus_americanus
ENSHBUG00000020412	-	70	54.545	ENSUMAG00000010903	SART1	69	54.023	Ursus_maritimus
ENSHBUG00000020412	-	70	52.765	ENSVVUG00000027041	SART1	56	54.324	Vulpes_vulpes
ENSHBUG00000020412	-	71	53.828	ENSXETG00000011429	sart1	65	45.562	Xenopus_tropicalis
ENSHBUG00000020412	-	70	62.648	ENSXCOG00000005296	SART1	58	61.745	Xiphophorus_couchianus