EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000020626 (Gene tree)
Gene ID: 102305014
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 25389 bases
Position: chrJH425562.1:549666-575054
Accession: 102305014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033602	RRM_5	PF13893.6	5.7e-08	1	2
ENSHBUP00000033602	RRM_5	PF13893.6	5.7e-08	2	2
ENSHBUP00000018529	RRM_5	PF13893.6	2.1e-06	1	1
ENSHBUP00000033602	RRM_1	PF00076.22	3.2e-41	1	3
ENSHBUP00000033602	RRM_1	PF00076.22	3.2e-41	2	3
ENSHBUP00000033602	RRM_1	PF00076.22	3.2e-41	3	3
ENSHBUP00000018529	RRM_1	PF00076.22	3.3e-41	1	3
ENSHBUP00000018529	RRM_1	PF00076.22	3.3e-41	2	3
ENSHBUP00000018529	RRM_1	PF00076.22	3.3e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000035127	-	12744	-	ENSHBUP00000018529	3565 (aa)	-	-
ENSHBUT00000035121	-	12657	XM_014338682	ENSHBUP00000033602	3536 (aa)	XP_014194168	UPI0006C953BF

Gene Model

Click here to download ENSHBUG00000020626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000020626	-	92	84.024	ENSHBUG00000023253	si:ch1073-335m2.2	99	84.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020626	-	93	48.330	ENSG00000065526	SPEN	96	81.461	Homo_sapiens
ENSHBUG00000020626	-	100	84.806	ENSAPOG00000009853	-	87	98.630	Acanthochromis_polyacanthus
ENSHBUG00000020626	-	97	78.919	ENSAPOG00000011411	si:ch1073-335m2.2	99	78.919	Acanthochromis_polyacanthus
ENSHBUG00000020626	-	69	56.898	ENSAMEG00000011817	SPEN	96	80.337	Ailuropoda_melanoleuca
ENSHBUG00000020626	-	83	73.954	ENSAOCG00000008077	si:ch1073-335m2.2	99	72.483	Amphiprion_ocellaris
ENSHBUG00000020626	-	100	84.661	ENSAOCG00000014505	-	100	84.657	Amphiprion_ocellaris
ENSHBUG00000020626	-	100	84.637	ENSAPEG00000010288	-	100	84.633	Amphiprion_percula
ENSHBUG00000020626	-	95	76.562	ENSAPEG00000013515	si:ch1073-335m2.2	100	76.562	Amphiprion_percula
ENSHBUG00000020626	-	97	78.919	ENSATEG00000007674	si:ch1073-335m2.2	99	78.919	Anabas_testudineus
ENSHBUG00000020626	-	100	81.185	ENSATEG00000005627	-	100	81.185	Anabas_testudineus
ENSHBUG00000020626	-	99	46.558	ENSAPLG00000012618	SPEN	99	78.146	Anas_platyrhynchos
ENSHBUG00000020626	-	99	45.060	ENSANAG00000034428	SPEN	96	72.093	Aotus_nancymaae
ENSHBUG00000020626	-	100	99.519	ENSACLG00000016922	-	100	99.519	Astatotilapia_calliptera
ENSHBUG00000020626	-	95	84.024	ENSACLG00000021433	si:ch1073-335m2.2	99	84.024	Astatotilapia_calliptera
ENSHBUG00000020626	-	100	55.326	ENSAMXG00000012485	spen	100	55.611	Astyanax_mexicanus
ENSHBUG00000020626	-	99	45.644	ENSBTAG00000018729	SPEN	97	80.337	Bos_taurus
ENSHBUG00000020626	-	99	72.727	ENSCJAG00000008527	SPEN	96	81.461	Callithrix_jacchus
ENSHBUG00000020626	-	87	52.336	ENSCAFG00000016132	-	92	81.461	Canis_familiaris
ENSHBUG00000020626	-	99	45.590	ENSCHIG00000025070	SPEN	96	81.461	Capra_hircus
ENSHBUG00000020626	-	90	42.457	ENSTSYG00000036016	SPEN	86	46.488	Carlito_syrichta
ENSHBUG00000020626	-	94	75.120	ENSCAPG00000013803	SPEN	97	45.401	Cavia_aperea
ENSHBUG00000020626	-	94	75.120	ENSCPOG00000014036	SPEN	96	45.595	Cavia_porcellus
ENSHBUG00000020626	-	99	41.151	ENSCCAG00000020258	SPEN	86	81.461	Cebus_capucinus
ENSHBUG00000020626	-	78	87.407	ENSCATG00000015079	SPEN	94	81.461	Cercocebus_atys
ENSHBUG00000020626	-	93	67.206	ENSCLAG00000002018	SPEN	93	67.206	Chinchilla_lanigera
ENSHBUG00000020626	-	100	46.849	ENSCPBG00000010477	SPEN	99	81.461	Chrysemys_picta_bellii
ENSHBUG00000020626	-	90	46.871	ENSCANG00000034547	SPEN	96	72.093	Colobus_angolensis_palliatus
ENSHBUG00000020626	-	88	48.361	ENSCGRG00001007725	Spen	97	82.022	Cricetulus_griseus_chok1gshd
ENSHBUG00000020626	-	88	46.774	ENSCGRG00000010581	Spen	97	78.667	Cricetulus_griseus_crigri
ENSHBUG00000020626	-	99	76.662	ENSCSEG00000003915	-	100	76.662	Cynoglossus_semilaevis
ENSHBUG00000020626	-	97	78.919	ENSCVAG00000009075	si:ch1073-335m2.2	99	78.919	Cyprinodon_variegatus
ENSHBUG00000020626	-	100	75.457	ENSCVAG00000016346	-	100	75.429	Cyprinodon_variegatus
ENSHBUG00000020626	-	100	41.555	ENSDARG00000074332	si:ch1073-335m2.2	100	46.269	Danio_rerio
ENSHBUG00000020626	-	100	53.319	ENSDARG00000074245	spen	100	91.852	Danio_rerio
ENSHBUG00000020626	-	99	46.232	ENSDNOG00000041948	SPEN	96	82.022	Dasypus_novemcinctus
ENSHBUG00000020626	-	90	45.922	ENSDORG00000023909	Spen	96	77.241	Dipodomys_ordii
ENSHBUG00000020626	-	94	87.500	ENSEASG00005015911	SPEN	96	81.461	Equus_asinus_asinus
ENSHBUG00000020626	-	94	87.500	ENSECAG00000008833	SPEN	96	81.461	Equus_caballus
ENSHBUG00000020626	-	57	88.372	ENSEEUG00000010255	SPEN	58	88.372	Erinaceus_europaeus
ENSHBUG00000020626	-	97	82.778	ENSELUG00000007726	si:ch1073-335m2.2	98	82.778	Esox_lucius
ENSHBUG00000020626	-	87	44.992	ENSFALG00000003551	SPEN	100	44.886	Ficedula_albicollis
ENSHBUG00000020626	-	94	46.647	ENSFDAG00000010212	SPEN	93	46.925	Fukomys_damarensis
ENSHBUG00000020626	-	97	73.430	ENSFHEG00000004544	si:ch1073-335m2.2	99	73.430	Fundulus_heteroclitus
ENSHBUG00000020626	-	95	73.301	ENSGMOG00000008156	si:ch1073-335m2.2	98	73.301	Gadus_morhua
ENSHBUG00000020626	-	97	88.043	ENSGMOG00000008397	-	98	89.385	Gadus_morhua
ENSHBUG00000020626	-	100	47.637	ENSGALG00000036932	SPEN	99	81.461	Gallus_gallus
ENSHBUG00000020626	-	100	76.858	ENSGAFG00000015819	-	88	94.382	Gambusia_affinis
ENSHBUG00000020626	-	100	42.165	ENSGACG00000001176	si:ch1073-335m2.2	100	41.939	Gasterosteus_aculeatus
ENSHBUG00000020626	-	100	75.407	ENSGACG00000005341	-	100	75.379	Gasterosteus_aculeatus
ENSHBUG00000020626	-	99	74.377	ENSGAGG00000020785	SPEN	99	81.461	Gopherus_agassizii
ENSHBUG00000020626	-	89	49.169	ENSGGOG00000012041	SPEN	96	81.461	Gorilla_gorilla
ENSHBUG00000020626	-	80	67.611	ENSHGLG00000019259	SPEN	81	67.611	Heterocephalus_glaber_female
ENSHBUG00000020626	-	68	67.611	ENSHGLG00100019294	SPEN	79	67.611	Heterocephalus_glaber_male
ENSHBUG00000020626	-	95	77.536	ENSHCOG00000006004	si:ch1073-335m2.2	99	77.536	Hippocampus_comes
ENSHBUG00000020626	-	100	52.682	ENSIPUG00000021668	spen	100	52.897	Ictalurus_punctatus
ENSHBUG00000020626	-	96	41.830	ENSIPUG00000018212	si:ch1073-335m2.2	99	44.276	Ictalurus_punctatus
ENSHBUG00000020626	-	88	67.339	ENSSTOG00000021428	SPEN	97	77.241	Ictidomys_tridecemlineatus
ENSHBUG00000020626	-	90	48.960	ENSJJAG00000010882	Spen	99	82.022	Jaculus_jaculus
ENSHBUG00000020626	-	97	77.838	ENSKMAG00000021725	si:ch1073-335m2.2	99	77.838	Kryptolebias_marmoratus
ENSHBUG00000020626	-	100	77.962	ENSKMAG00000003882	-	100	77.990	Kryptolebias_marmoratus
ENSHBUG00000020626	-	97	82.530	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.530	Labrus_bergylta
ENSHBUG00000020626	-	84	75.558	ENSLBEG00000019129	-	100	75.425	Labrus_bergylta
ENSHBUG00000020626	-	71	85.185	ENSLACG00000003258	SPEN	76	85.185	Latimeria_chalumnae
ENSHBUG00000020626	-	97	85.517	ENSLOCG00000007896	si:ch1073-335m2.2	97	85.517	Lepisosteus_oculatus
ENSHBUG00000020626	-	99	66.532	ENSLAFG00000004524	SPEN	94	77.778	Loxodonta_africana
ENSHBUG00000020626	-	86	67.339	ENSMFAG00000041974	SPEN	94	81.461	Macaca_fascicularis
ENSHBUG00000020626	-	84	67.339	ENSMNEG00000042402	SPEN	94	81.461	Macaca_nemestrina
ENSHBUG00000020626	-	86	67.339	ENSMLEG00000039293	SPEN	94	70.225	Mandrillus_leucophaeus
ENSHBUG00000020626	-	97	78.378	ENSMAMG00000023870	si:ch1073-335m2.2	99	78.378	Mastacembelus_armatus
ENSHBUG00000020626	-	95	84.024	ENSMZEG00005011762	si:ch1073-335m2.2	99	84.024	Maylandia_zebra
ENSHBUG00000020626	-	89	99.398	ENSMZEG00005021491	-	99	99.398	Maylandia_zebra
ENSHBUG00000020626	-	92	47.392	ENSMAUG00000008318	Spen	96	81.461	Mesocricetus_auratus
ENSHBUG00000020626	-	92	47.386	ENSMOCG00000016083	Spen	97	81.461	Microtus_ochrogaster
ENSHBUG00000020626	-	93	75.000	ENSMMOG00000021742	si:ch1073-335m2.2	99	80.233	Mola_mola
ENSHBUG00000020626	-	100	45.673	ENSMODG00000003411	SPEN	100	44.838	Monodelphis_domestica
ENSHBUG00000020626	-	100	81.839	ENSMALG00000008625	-	100	81.811	Monopterus_albus
ENSHBUG00000020626	-	90	47.806	MGP_CAROLIEiJ_G0026745	Spen	97	80.899	Mus_caroli
ENSHBUG00000020626	-	90	48.301	ENSMUSG00000040761	Spen	97	81.461	Mus_musculus
ENSHBUG00000020626	-	99	44.598	MGP_PahariEiJ_G0029076	Spen	97	80.899	Mus_pahari
ENSHBUG00000020626	-	99	45.016	MGP_SPRETEiJ_G0027724	Spen	97	80.899	Mus_spretus
ENSHBUG00000020626	-	66	77.778	ENSMPUG00000016317	SPEN	93	71.818	Mustela_putorius_furo
ENSHBUG00000020626	-	93	86.022	ENSMLUG00000010144	SPEN	92	86.022	Myotis_lucifugus
ENSHBUG00000020626	-	92	48.570	ENSNGAG00000000641	Spen	97	81.461	Nannospalax_galili
ENSHBUG00000020626	-	92	84.024	ENSNBRG00000005733	si:ch1073-335m2.2	99	84.024	Neolamprologus_brichardi
ENSHBUG00000020626	-	85	98.965	ENSNBRG00000022090	-	100	98.965	Neolamprologus_brichardi
ENSHBUG00000020626	-	89	82.292	ENSMEUG00000002422	SPEN	89	82.292	Notamacropus_eugenii
ENSHBUG00000020626	-	85	64.888	ENSOPRG00000015800	SPEN	82	78.667	Ochotona_princeps
ENSHBUG00000020626	-	100	42.801	ENSODEG00000016644	SPEN	100	42.771	Octodon_degus
ENSHBUG00000020626	-	100	95.061	ENSONIG00000006573	-	100	95.061	Oreochromis_niloticus
ENSHBUG00000020626	-	69	52.245	ENSOCUG00000010840	SPEN	97	63.743	Oryctolagus_cuniculus
ENSHBUG00000020626	-	95	74.874	ENSORLG00000018414	si:ch1073-335m2.2	99	74.874	Oryzias_latipes
ENSHBUG00000020626	-	87	66.240	ENSORLG00000028894	-	100	66.208	Oryzias_latipes
ENSHBUG00000020626	-	87	66.838	ENSORLG00020007735	-	100	66.677	Oryzias_latipes_hni
ENSHBUG00000020626	-	95	74.874	ENSORLG00020009351	si:ch1073-335m2.2	75	74.874	Oryzias_latipes_hni
ENSHBUG00000020626	-	100	68.542	ENSORLG00015022085	-	100	68.458	Oryzias_latipes_hsok
ENSHBUG00000020626	-	94	82.099	ENSORLG00015005537	si:ch1073-335m2.2	99	82.099	Oryzias_latipes_hsok
ENSHBUG00000020626	-	100	68.458	ENSOMEG00000007639	-	100	68.177	Oryzias_melastigma
ENSHBUG00000020626	-	96	82.822	ENSOMEG00000004509	si:ch1073-335m2.2	99	82.822	Oryzias_melastigma
ENSHBUG00000020626	-	99	68.273	ENSOGAG00000025110	SPEN	94	81.461	Otolemur_garnettii
ENSHBUG00000020626	-	99	44.929	ENSOARG00000008477	SPEN	96	73.099	Ovis_aries
ENSHBUG00000020626	-	88	48.302	ENSPPAG00000035690	SPEN	96	78.000	Pan_paniscus
ENSHBUG00000020626	-	84	67.339	ENSPANG00000006293	SPEN	96	81.461	Papio_anubis
ENSHBUG00000020626	-	100	53.217	ENSPKIG00000002617	SPEN	90	63.226	Paramormyrops_kingsleyae
ENSHBUG00000020626	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSHBUG00000020626	-	99	46.577	ENSPSIG00000008026	SPEN	99	78.146	Pelodiscus_sinensis
ENSHBUG00000020626	-	92	45.297	ENSPEMG00000022997	Spen	97	76.552	Peromyscus_maniculatus_bairdii
ENSHBUG00000020626	-	51	78.378	ENSPMEG00000002674	si:ch1073-335m2.2	98	78.378	Poecilia_mexicana
ENSHBUG00000020626	-	100	77.055	ENSPMEG00000006764	-	100	77.055	Poecilia_mexicana
ENSHBUG00000020626	-	100	76.999	ENSPREG00000010399	-	100	76.999	Poecilia_reticulata
ENSHBUG00000020626	-	89	48.878	ENSPPYG00000001834	SPEN	96	81.461	Pongo_abelii
ENSHBUG00000020626	-	88	65.323	ENSPCAG00000009543	SPEN	87	67.347	Procavia_capensis
ENSHBUG00000020626	-	99	65.863	ENSPCOG00000021735	SPEN	96	80.899	Propithecus_coquereli
ENSHBUG00000020626	-	74	65.587	ENSPVAG00000013794	SPEN	69	80.899	Pteropus_vampyrus
ENSHBUG00000020626	-	100	99.576	ENSPNYG00000012379	-	100	99.576	Pundamilia_nyererei
ENSHBUG00000020626	-	95	84.024	ENSPNYG00000009042	si:ch1073-335m2.2	99	84.024	Pundamilia_nyererei
ENSHBUG00000020626	-	100	56.922	ENSPNAG00000020795	spen	87	70.607	Pygocentrus_nattereri
ENSHBUG00000020626	-	98	69.811	ENSPNAG00000011452	si:ch1073-335m2.2	100	69.811	Pygocentrus_nattereri
ENSHBUG00000020626	-	90	67.623	ENSRNOG00000033556	Spen	97	78.146	Rattus_norvegicus
ENSHBUG00000020626	-	89	67.339	ENSRBIG00000039654	SPEN	96	78.000	Rhinopithecus_bieti
ENSHBUG00000020626	-	89	67.339	ENSRROG00000035686	SPEN	94	77.778	Rhinopithecus_roxellana
ENSHBUG00000020626	-	99	45.247	ENSSBOG00000028770	SPEN	96	77.778	Saimiri_boliviensis_boliviensis
ENSHBUG00000020626	-	99	45.344	ENSSHAG00000004960	SPEN	99	67.993	Sarcophilus_harrisii
ENSHBUG00000020626	-	100	54.595	ENSSFOG00015010267	si:ch1073-335m2.2	100	54.361	Scleropages_formosus
ENSHBUG00000020626	-	86	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	Scleropages_formosus
ENSHBUG00000020626	-	73	70.270	ENSSMAG00000000125	si:ch1073-335m2.2	100	70.270	Scophthalmus_maximus
ENSHBUG00000020626	-	100	81.169	ENSSMAG00000008996	-	100	81.169	Scophthalmus_maximus
ENSHBUG00000020626	-	100	84.101	ENSSDUG00000003476	-	97	97.000	Seriola_dumerili
ENSHBUG00000020626	-	55	70.136	ENSSDUG00000008416	si:ch1073-335m2.2	54	70.136	Seriola_dumerili
ENSHBUG00000020626	-	93	69.683	ENSSLDG00000023347	si:ch1073-335m2.2	95	69.683	Seriola_lalandi_dorsalis
ENSHBUG00000020626	-	100	83.895	ENSSLDG00000012950	-	97	97.000	Seriola_lalandi_dorsalis
ENSHBUG00000020626	-	87	92.593	ENSSPUG00000001866	-	100	92.593	Sphenodon_punctatus
ENSHBUG00000020626	-	98	79.459	ENSSPAG00000012454	si:ch1073-335m2.2	100	79.459	Stegastes_partitus
ENSHBUG00000020626	-	100	85.618	ENSSPAG00000006014	-	100	85.445	Stegastes_partitus
ENSHBUG00000020626	-	77	48.492	ENSSSCG00000034484	SPEN	84	81.461	Sus_scrofa
ENSHBUG00000020626	-	61	74.000	ENSTRUG00000021008	si:ch1073-335m2.2	99	74.000	Takifugu_rubripes
ENSHBUG00000020626	-	100	74.845	ENSTRUG00000024350	-	100	74.585	Takifugu_rubripes
ENSHBUG00000020626	-	98	80.337	ENSTNIG00000014666	si:ch1073-335m2.2	93	80.337	Tetraodon_nigroviridis
ENSHBUG00000020626	-	97	85.779	ENSTNIG00000010907	-	100	85.892	Tetraodon_nigroviridis
ENSHBUG00000020626	-	69	80.423	ENSTBEG00000003628	SPEN	69	80.423	Tupaia_belangeri
ENSHBUG00000020626	-	72	80.423	ENSTTRG00000015704	SPEN	68	80.423	Tursiops_truncatus
ENSHBUG00000020626	-	68	78.283	ENSUAMG00000009600	SPEN	94	81.461	Ursus_americanus
ENSHBUG00000020626	-	66	78.283	ENSUMAG00000021641	SPEN	93	75.796	Ursus_maritimus
ENSHBUG00000020626	-	88	100.000	ENSVVUG00000028951	SPEN	93	100.000	Vulpes_vulpes
ENSHBUG00000020626	-	97	75.500	ENSXCOG00000004516	si:ch1073-335m2.2	99	75.500	Xiphophorus_couchianus
ENSHBUG00000020626	-	97	78.378	ENSXMAG00000029887	si:ch1073-335m2.2	99	78.378	Xiphophorus_maculatus
ENSHBUG00000020626	-	100	76.548	ENSXMAG00000021384	-	87	94.382	Xiphophorus_maculatus