EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000020762 (Gene tree)
Gene ID: 102299658
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 46829 bases
Position: chrJH425375.1:1626373-1673201
Accession: 102299658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000018544	La	PF05383.17	1.4e-20	1	1
ENSHBUP00000018577	La	PF05383.17	1.5e-20	1	1
ENSHBUP00000018589	La	PF05383.17	1.6e-20	1	1
ENSHBUP00000018568	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000027654	-	3514	XM_014333821	ENSHBUP00000018568	978 (aa)	XP_014189307	UPI0006C9D806
ENSHBUT00000027687	-	3697	XM_005923128	ENSHBUP00000018589	1109 (aa)	XP_005923190	UPI0006C9D123
ENSHBUT00000035130	-	2529	-	ENSHBUP00000018544	842 (aa)	-	-
ENSHBUT00000027669	-	3625	XM_014333820	ENSHBUP00000018577	1085 (aa)	XP_014189306	UPI0006C9E261

Gene Model

Click here to download ENSHBUG00000020762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000020762	larp1	92	58.509	ENSHBUG00000009730	larp1b	92	53.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020762	larp1	97	68.743	ENSG00000155506	LARP1	90	81.818	Homo_sapiens
ENSHBUG00000020762	larp1	87	97.235	ENSAPOG00000020685	larp1	99	97.235	Acanthochromis_polyacanthus
ENSHBUG00000020762	larp1	97	69.153	ENSAMEG00000016673	LARP1	99	68.551	Ailuropoda_melanoleuca
ENSHBUG00000020762	larp1	100	83.806	ENSACIG00000012994	larp1	100	82.891	Amphilophus_citrinellus
ENSHBUG00000020762	larp1	93	89.255	ENSAOCG00000007792	larp1	100	93.099	Amphiprion_ocellaris
ENSHBUG00000020762	larp1	99	93.449	ENSAPEG00000022246	larp1	100	90.893	Amphiprion_percula
ENSHBUG00000020762	larp1	98	91.925	ENSATEG00000013523	larp1	100	90.250	Anabas_testudineus
ENSHBUG00000020762	larp1	91	73.162	ENSAPLG00000007559	LARP1	99	72.459	Anas_platyrhynchos
ENSHBUG00000020762	larp1	97	72.037	ENSACAG00000004071	LARP1	97	72.626	Anolis_carolinensis
ENSHBUG00000020762	larp1	97	69.196	ENSANAG00000029949	LARP1	99	66.051	Aotus_nancymaae
ENSHBUG00000020762	larp1	100	99.102	ENSACLG00000015256	larp1	100	99.102	Astatotilapia_calliptera
ENSHBUG00000020762	larp1	96	80.892	ENSAMXG00000000859	larp1	98	77.264	Astyanax_mexicanus
ENSHBUG00000020762	larp1	94	70.375	ENSBTAG00000008443	LARP1	99	63.410	Bos_taurus
ENSHBUG00000020762	larp1	97	69.196	ENSCJAG00000004454	LARP1	99	64.068	Callithrix_jacchus
ENSHBUG00000020762	larp1	97	69.040	ENSCAFG00000017639	LARP1	99	68.654	Canis_familiaris
ENSHBUG00000020762	larp1	97	69.040	ENSCAFG00020023860	LARP1	99	70.000	Canis_lupus_dingo
ENSHBUG00000020762	larp1	94	70.141	ENSCHIG00000014414	LARP1	99	62.020	Capra_hircus
ENSHBUG00000020762	larp1	97	69.570	ENSTSYG00000013732	LARP1	98	66.357	Carlito_syrichta
ENSHBUG00000020762	larp1	91	68.370	ENSCAPG00000013865	LARP1	85	68.779	Cavia_aperea
ENSHBUG00000020762	larp1	95	70.070	ENSCPOG00000003377	LARP1	99	68.383	Cavia_porcellus
ENSHBUG00000020762	larp1	97	69.196	ENSCCAG00000025201	LARP1	99	63.775	Cebus_capucinus
ENSHBUG00000020762	larp1	97	69.083	ENSCATG00000030675	LARP1	99	62.063	Cercocebus_atys
ENSHBUG00000020762	larp1	97	69.605	ENSCLAG00000012755	LARP1	99	67.284	Chinchilla_lanigera
ENSHBUG00000020762	larp1	97	68.038	ENSCSAG00000010800	LARP1	98	67.742	Chlorocebus_sabaeus
ENSHBUG00000020762	larp1	91	65.242	ENSCHOG00000012716	LARP1	91	65.242	Choloepus_hoffmanni
ENSHBUG00000020762	larp1	98	73.434	ENSCPBG00000002173	LARP1	93	72.594	Chrysemys_picta_bellii
ENSHBUG00000020762	larp1	97	68.969	ENSCANG00000037418	LARP1	92	68.692	Colobus_angolensis_palliatus
ENSHBUG00000020762	larp1	97	68.891	ENSCGRG00001016913	Larp1	99	64.382	Cricetulus_griseus_chok1gshd
ENSHBUG00000020762	larp1	95	65.158	ENSCGRG00000009916	Larp1	99	66.131	Cricetulus_griseus_crigri
ENSHBUG00000020762	larp1	99	91.020	ENSCSEG00000016431	larp1	100	87.706	Cynoglossus_semilaevis
ENSHBUG00000020762	larp1	98	88.866	ENSCVAG00000022687	larp1	100	86.905	Cyprinodon_variegatus
ENSHBUG00000020762	larp1	99	71.914	ENSDARG00000101722	larp1	95	73.544	Danio_rerio
ENSHBUG00000020762	larp1	97	69.379	ENSDNOG00000012073	LARP1	99	63.832	Dasypus_novemcinctus
ENSHBUG00000020762	larp1	97	66.940	ENSDORG00000002897	Larp1	97	65.879	Dipodomys_ordii
ENSHBUG00000020762	larp1	91	70.073	ENSETEG00000020251	LARP1	100	70.121	Echinops_telfairi
ENSHBUG00000020762	larp1	97	69.039	ENSEASG00005001070	LARP1	99	63.450	Equus_asinus_asinus
ENSHBUG00000020762	larp1	97	69.039	ENSECAG00000017002	LARP1	78	64.489	Equus_caballus
ENSHBUG00000020762	larp1	94	66.706	ENSEEUG00000001065	LARP1	99	65.579	Erinaceus_europaeus
ENSHBUG00000020762	larp1	98	82.088	ENSELUG00000019403	larp1	99	78.788	Esox_lucius
ENSHBUG00000020762	larp1	97	69.040	ENSFCAG00000000592	LARP1	99	64.018	Felis_catus
ENSHBUG00000020762	larp1	92	76.943	ENSFALG00000008335	LARP1	99	74.026	Ficedula_albicollis
ENSHBUG00000020762	larp1	98	69.300	ENSFDAG00000021125	LARP1	99	68.416	Fukomys_damarensis
ENSHBUG00000020762	larp1	63	79.712	ENSFHEG00000020307	larp1	97	79.712	Fundulus_heteroclitus
ENSHBUG00000020762	larp1	98	73.185	ENSGALG00000040109	LARP1	97	72.148	Gallus_gallus
ENSHBUG00000020762	larp1	98	73.434	ENSGAGG00000025113	LARP1	98	73.267	Gopherus_agassizii
ENSHBUG00000020762	larp1	97	68.743	ENSGGOG00000006048	LARP1	94	67.680	Gorilla_gorilla
ENSHBUG00000020762	larp1	98	68.919	ENSHGLG00000006267	LARP1	99	63.059	Heterocephalus_glaber_female
ENSHBUG00000020762	larp1	96	58.891	ENSHGLG00100003395	-	90	58.603	Heterocephalus_glaber_male
ENSHBUG00000020762	larp1	98	69.032	ENSHGLG00100014230	-	99	68.140	Heterocephalus_glaber_male
ENSHBUG00000020762	larp1	89	92.961	ENSHCOG00000010786	larp1	99	92.961	Hippocampus_comes
ENSHBUG00000020762	larp1	96	75.344	ENSIPUG00000019105	Larp1	94	78.361	Ictalurus_punctatus
ENSHBUG00000020762	larp1	98	65.350	ENSSTOG00000005678	LARP1	98	65.982	Ictidomys_tridecemlineatus
ENSHBUG00000020762	larp1	97	64.800	ENSJJAG00000016950	Larp1	99	60.252	Jaculus_jaculus
ENSHBUG00000020762	larp1	99	89.765	ENSKMAG00000018468	larp1	99	89.867	Kryptolebias_marmoratus
ENSHBUG00000020762	larp1	99	88.618	ENSLBEG00000027172	larp1	100	86.482	Labrus_bergylta
ENSHBUG00000020762	larp1	92	79.515	ENSLOCG00000012457	larp1	99	76.471	Lepisosteus_oculatus
ENSHBUG00000020762	larp1	97	67.800	ENSLAFG00000008991	LARP1	99	62.940	Loxodonta_africana
ENSHBUG00000020762	larp1	97	68.969	ENSMFAG00000031651	LARP1	92	68.383	Macaca_fascicularis
ENSHBUG00000020762	larp1	97	68.155	ENSMMUG00000009411	LARP1	99	66.116	Macaca_mulatta
ENSHBUG00000020762	larp1	97	69.083	ENSMNEG00000039294	LARP1	98	70.000	Macaca_nemestrina
ENSHBUG00000020762	larp1	97	68.743	ENSMLEG00000035142	LARP1	92	68.486	Mandrillus_leucophaeus
ENSHBUG00000020762	larp1	99	92.339	ENSMAMG00000021788	larp1	100	89.829	Mastacembelus_armatus
ENSHBUG00000020762	larp1	100	99.102	ENSMZEG00005009345	larp1	100	99.102	Maylandia_zebra
ENSHBUG00000020762	larp1	98	72.434	ENSMGAG00000005696	LARP1	99	71.443	Meleagris_gallopavo
ENSHBUG00000020762	larp1	97	69.005	ENSMAUG00000001385	Larp1	99	64.563	Mesocricetus_auratus
ENSHBUG00000020762	larp1	98	69.104	ENSMICG00000000837	LARP1	98	70.033	Microcebus_murinus
ENSHBUG00000020762	larp1	97	68.891	ENSMOCG00000008920	Larp1	99	64.440	Microtus_ochrogaster
ENSHBUG00000020762	larp1	93	71.305	ENSMMOG00000013364	larp1	99	69.413	Mola_mola
ENSHBUG00000020762	larp1	97	69.921	ENSMODG00000008663	LARP1	98	69.097	Monodelphis_domestica
ENSHBUG00000020762	larp1	99	92.119	ENSMALG00000017180	larp1	100	88.188	Monopterus_albus
ENSHBUG00000020762	larp1	97	68.665	MGP_CAROLIEiJ_G0016383	Larp1	99	64.892	Mus_caroli
ENSHBUG00000020762	larp1	97	69.118	ENSMUSG00000037331	Larp1	99	64.982	Mus_musculus
ENSHBUG00000020762	larp1	97	69.005	MGP_PahariEiJ_G0017518	Larp1	99	64.743	Mus_pahari
ENSHBUG00000020762	larp1	97	69.118	MGP_SPRETEiJ_G0017225	Larp1	99	64.982	Mus_spretus
ENSHBUG00000020762	larp1	79	65.832	ENSMPUG00000013564	LARP1	99	61.464	Mustela_putorius_furo
ENSHBUG00000020762	larp1	97	65.804	ENSMLUG00000002608	LARP1	99	65.302	Myotis_lucifugus
ENSHBUG00000020762	larp1	97	67.958	ENSNGAG00000001098	Larp1	98	65.641	Nannospalax_galili
ENSHBUG00000020762	larp1	96	91.774	ENSNBRG00000008963	larp1	98	94.268	Neolamprologus_brichardi
ENSHBUG00000020762	larp1	98	67.799	ENSNLEG00000016588	LARP1	98	66.562	Nomascus_leucogenys
ENSHBUG00000020762	larp1	97	68.822	ENSMEUG00000002957	LARP1	99	65.696	Notamacropus_eugenii
ENSHBUG00000020762	larp1	98	67.579	ENSOPRG00000013014	LARP1	99	68.763	Ochotona_princeps
ENSHBUG00000020762	larp1	97	68.623	ENSODEG00000010824	LARP1	99	68.486	Octodon_degus
ENSHBUG00000020762	larp1	99	93.750	ENSONIG00000017308	larp1	100	93.841	Oreochromis_niloticus
ENSHBUG00000020762	larp1	98	70.134	ENSOANG00000005096	LARP1	99	69.461	Ornithorhynchus_anatinus
ENSHBUG00000020762	larp1	97	69.040	ENSOCUG00000013066	LARP1	99	64.472	Oryctolagus_cuniculus
ENSHBUG00000020762	larp1	100	87.526	ENSORLG00000000824	larp1	100	84.700	Oryzias_latipes
ENSHBUG00000020762	larp1	100	87.628	ENSORLG00020022241	larp1	100	84.700	Oryzias_latipes_hni
ENSHBUG00000020762	larp1	100	85.992	ENSORLG00015007538	larp1	100	84.700	Oryzias_latipes_hsok
ENSHBUG00000020762	larp1	99	86.182	ENSOMEG00000003134	larp1	100	83.685	Oryzias_melastigma
ENSHBUG00000020762	larp1	97	69.040	ENSOGAG00000016750	LARP1	99	68.486	Otolemur_garnettii
ENSHBUG00000020762	larp1	94	68.816	ENSOARG00000009893	LARP1	99	66.394	Ovis_aries
ENSHBUG00000020762	larp1	97	68.743	ENSPPAG00000042993	LARP1	92	68.486	Pan_paniscus
ENSHBUG00000020762	larp1	97	67.756	ENSPPRG00000009780	LARP1	93	66.667	Panthera_pardus
ENSHBUG00000020762	larp1	97	67.873	ENSPTIG00000007013	LARP1	93	67.181	Panthera_tigris_altaica
ENSHBUG00000020762	larp1	98	68.315	ENSPTRG00000017447	LARP1	99	62.063	Pan_troglodytes
ENSHBUG00000020762	larp1	97	69.083	ENSPANG00000008080	LARP1	99	62.063	Papio_anubis
ENSHBUG00000020762	larp1	96	74.788	ENSPKIG00000017153	-	99	69.073	Paramormyrops_kingsleyae
ENSHBUG00000020762	larp1	94	81.828	ENSPKIG00000010096	larp1	99	77.419	Paramormyrops_kingsleyae
ENSHBUG00000020762	larp1	94	82.699	ENSPMGG00000011599	larp1	98	79.844	Periophthalmus_magnuspinnatus
ENSHBUG00000020762	larp1	97	67.840	ENSPEMG00000022523	Larp1	98	65.776	Peromyscus_maniculatus_bairdii
ENSHBUG00000020762	larp1	97	70.504	ENSPCIG00000019242	LARP1	89	66.543	Phascolarctos_cinereus
ENSHBUG00000020762	larp1	99	86.517	ENSPFOG00000005836	larp1	100	83.871	Poecilia_formosa
ENSHBUG00000020762	larp1	99	86.210	ENSPLAG00000008936	larp1	100	84.432	Poecilia_latipinna
ENSHBUG00000020762	larp1	99	86.415	ENSPMEG00000013656	larp1	100	83.781	Poecilia_mexicana
ENSHBUG00000020762	larp1	99	86.108	ENSPREG00000005726	larp1	99	86.313	Poecilia_reticulata
ENSHBUG00000020762	larp1	97	67.084	ENSPCAG00000006407	LARP1	98	66.114	Procavia_capensis
ENSHBUG00000020762	larp1	98	60.444	ENSPCOG00000016949	LARP1	99	63.860	Propithecus_coquereli
ENSHBUG00000020762	larp1	95	70.104	ENSPVAG00000002262	LARP1	99	63.515	Pteropus_vampyrus
ENSHBUG00000020762	larp1	100	99.102	ENSPNYG00000007938	larp1	100	99.102	Pundamilia_nyererei
ENSHBUG00000020762	larp1	98	78.089	ENSPNAG00000021427	larp1	99	76.471	Pygocentrus_nattereri
ENSHBUG00000020762	larp1	97	67.723	ENSRNOG00000031544	Larp1	98	65.911	Rattus_norvegicus
ENSHBUG00000020762	larp1	97	68.743	ENSRBIG00000038005	LARP1	92	68.486	Rhinopithecus_bieti
ENSHBUG00000020762	larp1	97	68.743	ENSRROG00000034073	LARP1	98	70.111	Rhinopithecus_roxellana
ENSHBUG00000020762	larp1	97	69.196	ENSSBOG00000019816	LARP1	99	66.186	Saimiri_boliviensis_boliviensis
ENSHBUG00000020762	larp1	97	71.019	ENSSHAG00000011115	LARP1	99	70.393	Sarcophilus_harrisii
ENSHBUG00000020762	larp1	95	78.844	ENSSFOG00015020304	larp1	93	79.154	Scleropages_formosus
ENSHBUG00000020762	larp1	98	77.140	ENSSFOG00015018058	-	99	72.778	Scleropages_formosus
ENSHBUG00000020762	larp1	93	86.640	ENSSMAG00000007468	larp1	98	87.917	Scophthalmus_maximus
ENSHBUG00000020762	larp1	99	93.598	ENSSDUG00000000268	larp1	100	91.487	Seriola_dumerili
ENSHBUG00000020762	larp1	100	90.845	ENSSLDG00000016505	larp1	100	90.845	Seriola_lalandi_dorsalis
ENSHBUG00000020762	larp1	70	77.660	ENSSARG00000013907	-	88	78.521	Sorex_araneus
ENSHBUG00000020762	larp1	98	72.960	ENSSPUG00000012179	-	99	67.203	Sphenodon_punctatus
ENSHBUG00000020762	larp1	99	93.212	ENSSPAG00000003910	larp1	100	91.067	Stegastes_partitus
ENSHBUG00000020762	larp1	95	69.757	ENSSSCG00000017069	LARP1	99	69.341	Sus_scrofa
ENSHBUG00000020762	larp1	95	70.934	ENSTGUG00000000704	LARP1	100	72.299	Taeniopygia_guttata
ENSHBUG00000020762	larp1	99	88.446	ENSTRUG00000009470	larp1	99	86.239	Takifugu_rubripes
ENSHBUG00000020762	larp1	91	68.613	ENSTBEG00000003381	LARP1	99	67.952	Tupaia_belangeri
ENSHBUG00000020762	larp1	98	68.350	ENSTTRG00000015934	LARP1	99	67.963	Tursiops_truncatus
ENSHBUG00000020762	larp1	97	69.040	ENSUAMG00000019334	LARP1	99	63.750	Ursus_americanus
ENSHBUG00000020762	larp1	95	69.036	ENSUMAG00000002934	LARP1	96	69.473	Ursus_maritimus
ENSHBUG00000020762	larp1	97	69.040	ENSVVUG00000004644	LARP1	99	70.000	Vulpes_vulpes
ENSHBUG00000020762	larp1	98	72.069	ENSXETG00000008413	larp1	93	71.545	Xenopus_tropicalis
ENSHBUG00000020762	larp1	87	85.753	ENSXCOG00000004022	larp1	99	82.984	Xiphophorus_couchianus
ENSHBUG00000020762	larp1	99	86.108	ENSXMAG00000018780	larp1	100	83.498	Xiphophorus_maculatus