EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000020853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3219 bases
Position: chrJH425876.1:357361-360579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033759	RVT_1	PF00078.27	7.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000027887	-	3219	-	ENSHBUP00000033759	755 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000020853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000020853	-	50	33.073	ENSHBUG00000015481	-	95	33.073
ENSHBUG00000020853	-	52	56.313	ENSHBUG00000020868	-	97	56.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020853	-	53	30.637	ENSAOCG00000022482	-	51	30.637	Amphiprion_ocellaris
ENSHBUG00000020853	-	55	31.059	ENSAOCG00000013559	-	51	31.059	Amphiprion_ocellaris
ENSHBUG00000020853	-	56	30.645	ENSAPEG00000010007	-	52	30.645	Amphiprion_percula
ENSHBUG00000020853	-	56	31.106	ENSAPEG00000015961	-	54	31.106	Amphiprion_percula
ENSHBUG00000020853	-	51	40.052	ENSACLG00000011319	-	100	40.052	Astatotilapia_calliptera
ENSHBUG00000020853	-	90	74.926	ENSACLG00000011312	-	99	74.926	Astatotilapia_calliptera
ENSHBUG00000020853	-	55	32.075	ENSACLG00000020885	-	53	32.075	Astatotilapia_calliptera
ENSHBUG00000020853	-	55	31.442	ENSACLG00000020106	-	54	31.442	Astatotilapia_calliptera
ENSHBUG00000020853	-	62	31.950	ENSACLG00000015496	-	52	31.950	Astatotilapia_calliptera
ENSHBUG00000020853	-	67	30.874	ENSACLG00000027433	-	52	30.874	Astatotilapia_calliptera
ENSHBUG00000020853	-	57	70.258	ENSACLG00000015899	-	58	70.258	Astatotilapia_calliptera
ENSHBUG00000020853	-	55	32.151	ENSACLG00000008786	-	53	32.151	Astatotilapia_calliptera
ENSHBUG00000020853	-	60	31.004	ENSACLG00000011463	-	55	31.004	Astatotilapia_calliptera
ENSHBUG00000020853	-	62	30.928	ENSACLG00000003130	-	53	30.928	Astatotilapia_calliptera
ENSHBUG00000020853	-	50	33.777	ENSAMXG00000032036	-	55	32.407	Astyanax_mexicanus
ENSHBUG00000020853	-	52	30.051	ENSAMXG00000040763	-	99	30.051	Astyanax_mexicanus
ENSHBUG00000020853	-	57	30.580	ENSAMXG00000040121	-	51	30.580	Astyanax_mexicanus
ENSHBUG00000020853	-	56	30.896	ENSAMXG00000035718	-	78	30.896	Astyanax_mexicanus
ENSHBUG00000020853	-	54	36.842	ENSCVAG00000007707	-	61	36.842	Cyprinodon_variegatus
ENSHBUG00000020853	-	69	33.395	ENSDARG00000103562	CU462878.2	60	33.395	Danio_rerio
ENSHBUG00000020853	-	54	32.360	ENSDARG00000086420	CABZ01046949.1	52	32.603	Danio_rerio
ENSHBUG00000020853	-	55	30.095	ENSELUG00000002589	-	89	30.095	Esox_lucius
ENSHBUG00000020853	-	60	30.258	ENSKMAG00000014872	-	56	30.258	Kryptolebias_marmoratus
ENSHBUG00000020853	-	53	31.204	ENSKMAG00000015028	-	51	31.204	Kryptolebias_marmoratus
ENSHBUG00000020853	-	62	31.315	ENSLACG00000022265	-	61	31.315	Latimeria_chalumnae
ENSHBUG00000020853	-	53	37.469	ENSLOCG00000000179	-	61	37.469	Lepisosteus_oculatus
ENSHBUG00000020853	-	64	37.090	ENSLOCG00000000437	-	56	37.090	Lepisosteus_oculatus
ENSHBUG00000020853	-	59	35.714	ENSLOCG00000013905	-	58	35.714	Lepisosteus_oculatus
ENSHBUG00000020853	-	62	33.755	ENSMZEG00005011529	-	89	33.755	Maylandia_zebra
ENSHBUG00000020853	-	62	33.755	ENSMZEG00005017030	-	89	33.755	Maylandia_zebra
ENSHBUG00000020853	-	55	32.311	ENSMZEG00005015509	-	53	32.311	Maylandia_zebra
ENSHBUG00000020853	-	53	38.958	ENSMZEG00005008304	-	94	38.958	Maylandia_zebra
ENSHBUG00000020853	-	53	38.958	ENSMZEG00005025877	-	94	38.958	Maylandia_zebra
ENSHBUG00000020853	-	63	86.526	ENSONIG00000021275	-	64	86.526	Oreochromis_niloticus
ENSHBUG00000020853	-	53	31.034	ENSORLG00000023575	-	51	31.034	Oryzias_latipes
ENSHBUG00000020853	-	56	30.162	ENSORLG00000029714	-	50	30.162	Oryzias_latipes
ENSHBUG00000020853	-	63	30.658	ENSORLG00000024714	-	54	30.658	Oryzias_latipes
ENSHBUG00000020853	-	53	30.542	ENSORLG00000025260	-	51	30.542	Oryzias_latipes
ENSHBUG00000020853	-	65	32.525	ENSORLG00000023632	-	53	32.525	Oryzias_latipes
ENSHBUG00000020853	-	64	30.723	ENSORLG00000030415	-	61	30.723	Oryzias_latipes
ENSHBUG00000020853	-	53	31.553	ENSORLG00000028706	-	81	31.553	Oryzias_latipes
ENSHBUG00000020853	-	50	32.368	ENSORLG00020018629	-	100	32.368	Oryzias_latipes_hni
ENSHBUG00000020853	-	56	30.626	ENSORLG00020010757	-	51	30.626	Oryzias_latipes_hni
ENSHBUG00000020853	-	57	34.081	ENSORLG00020014626	-	82	34.081	Oryzias_latipes_hni
ENSHBUG00000020853	-	50	31.593	ENSORLG00020010425	-	67	31.593	Oryzias_latipes_hni
ENSHBUG00000020853	-	53	30.296	ENSORLG00015015728	-	51	30.296	Oryzias_latipes_hsok
ENSHBUG00000020853	-	53	30.542	ENSORLG00015006862	-	51	30.542	Oryzias_latipes_hsok
ENSHBUG00000020853	-	50	32.376	ENSORLG00015007703	-	98	32.376	Oryzias_latipes_hsok
ENSHBUG00000020853	-	64	31.301	ENSOMEG00000001546	-	51	31.301	Oryzias_melastigma
ENSHBUG00000020853	-	60	31.749	ENSPMEG00000013148	-	50	31.749	Poecilia_mexicana
ENSHBUG00000020853	-	53	31.415	ENSPNAG00000014375	-	99	31.415	Pygocentrus_nattereri
ENSHBUG00000020853	-	58	30.058	ENSXETG00000030860	-	55	30.058	Xenopus_tropicalis
ENSHBUG00000020853	-	62	30.323	ENSXETG00000032308	-	56	30.323	Xenopus_tropicalis
ENSHBUG00000020853	-	64	30.020	ENSXETG00000034134	-	62	30.020	Xenopus_tropicalis