EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000020868 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 8158 bases
Position: chrJH425876.1:348811-356968
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000018754	RVT_1	PF00078.27	4.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000035215	-	1233	-	ENSHBUP00000018754	410 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000020868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000020868	-	76	38.217	ENSHBUG00000011715	-	79	38.217
ENSHBUG00000020868	-	70	34.495	ENSHBUG00000003796	-	68	34.495
ENSHBUG00000020868	-	56	36.087	ENSHBUG00000015481	-	58	36.087
ENSHBUG00000020868	-	97	56.313	ENSHBUG00000020853	-	52	56.313
ENSHBUG00000020868	-	79	36.196	ENSHBUG00000007736	-	78	36.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020868	-	67	41.667	ENSACLG00000006900	-	77	41.667	Astatotilapia_calliptera
ENSHBUG00000020868	-	79	32.716	ENSDARG00000086849	si:dkey-187k19.2	55	32.716	Danio_rerio
ENSHBUG00000020868	-	64	37.654	ENSEBUG00000005774	-	85	37.654	Eptatretus_burgeri
ENSHBUG00000020868	-	71	30.479	ENSKMAG00000001475	-	51	30.479	Kryptolebias_marmoratus
ENSHBUG00000020868	-	78	39.441	ENSKMAG00000007124	-	64	39.441	Kryptolebias_marmoratus
ENSHBUG00000020868	-	66	42.125	ENSLBEG00000018239	-	91	42.125	Labrus_bergylta
ENSHBUG00000020868	-	78	47.516	ENSLOCG00000018030	-	89	47.516	Lepisosteus_oculatus
ENSHBUG00000020868	-	84	40.290	ENSORLG00000029559	-	86	40.290	Oryzias_latipes
ENSHBUG00000020868	-	85	39.205	ENSPLAG00000021304	-	84	39.205	Poecilia_latipinna
ENSHBUG00000020868	-	83	40.290	ENSPMEG00000005418	-	90	40.290	Poecilia_mexicana
ENSHBUG00000020868	-	85	39.205	ENSPMEG00000021732	-	86	39.205	Poecilia_mexicana
ENSHBUG00000020868	-	70	31.333	ENSSFOG00015015726	-	93	31.333	Scleropages_formosus
ENSHBUG00000020868	-	66	40.146	ENSSLDG00000000237	-	93	39.116	Seriola_lalandi_dorsalis
ENSHBUG00000020868	-	50	39.130	ENSTNIG00000000750	-	68	39.130	Tetraodon_nigroviridis
ENSHBUG00000020868	-	80	41.104	ENSXCOG00000012075	-	80	41.104	Xiphophorus_couchianus
ENSHBUG00000020868	-	83	40.176	ENSXMAG00000020872	-	76	40.176	Xiphophorus_maculatus
ENSHBUG00000020868	-	83	40.176	ENSXMAG00000028317	-	76	40.176	Xiphophorus_maculatus