EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000020978 (Gene tree)
Gene ID: 102313000
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 11650 bases
Position: chrJH425597.1:690877-702526
Accession: 102313000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033820	RRM_5	PF13893.6	1.9e-12	1	2
ENSHBUP00000033820	RRM_5	PF13893.6	1.9e-12	2	2
ENSHBUP00000033828	RRM_5	PF13893.6	2.1e-12	1	2
ENSHBUP00000033828	RRM_5	PF13893.6	2.1e-12	2	2
ENSHBUP00000033820	RRM_1	PF00076.22	1.5e-64	1	3
ENSHBUP00000033820	RRM_1	PF00076.22	1.5e-64	2	3
ENSHBUP00000033820	RRM_1	PF00076.22	1.5e-64	3	3
ENSHBUP00000033828	RRM_1	PF00076.22	1.6e-64	1	3
ENSHBUP00000033828	RRM_1	PF00076.22	1.6e-64	2	3
ENSHBUP00000033828	RRM_1	PF00076.22	1.6e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000028006	-	1038	-	ENSHBUP00000033820	345 (aa)	-	-
ENSHBUT00000035300	-	1059	XM_005939928	ENSHBUP00000033828	352 (aa)	XP_005939990	-

Gene Model

Click here to download ENSHBUG00000020978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000020978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000020978	elavl3	87	41.304	ENSHBUG00000005058	-	73	41.304
ENSHBUG00000020978	elavl3	72	30.864	ENSHBUG00000005313	rbms2b	51	30.864
ENSHBUG00000020978	elavl3	69	37.143	ENSHBUG00000004516	RBMS1	50	37.143
ENSHBUG00000020978	elavl3	88	38.462	ENSHBUG00000023154	-	64	38.462
ENSHBUG00000020978	elavl3	99	84.091	ENSHBUG00000009691	elavl4	96	81.370
ENSHBUG00000020978	elavl3	78	42.553	ENSHBUG00000005718	-	62	42.553
ENSHBUG00000020978	elavl3	97	64.264	ENSHBUG00000007503	-	92	68.167
ENSHBUG00000020978	elavl3	88	37.179	ENSHBUG00000000813	tial1	69	37.179
ENSHBUG00000020978	elavl3	99	41.860	ENSHBUG00000021618	celf4	63	41.975
ENSHBUG00000020978	elavl3	79	39.000	ENSHBUG00000003367	celf3b	56	41.860
ENSHBUG00000020978	elavl3	99	79.121	ENSHBUG00000005968	ELAVL2	94	79.121
ENSHBUG00000020978	elavl3	90	73.482	ENSHBUG00000007897	elavl1a	95	69.677
ENSHBUG00000020978	elavl3	89	40.698	ENSHBUG00000001878	si:dkey-205h23.2	77	33.333
ENSHBUG00000020978	elavl3	79	41.053	ENSHBUG00000017881	celf1	56	41.489
ENSHBUG00000020978	elavl3	55	32.821	ENSHBUG00000004802	rbms1a	60	32.093
ENSHBUG00000020978	elavl3	91	30.921	ENSHBUG00000002075	pabpc1b	61	30.921
ENSHBUG00000020978	elavl3	89	31.818	ENSHBUG00000020487	pabpc1a	68	31.818
ENSHBUG00000020978	elavl3	89	40.698	ENSHBUG00000006465	celf5a	61	40.698
ENSHBUG00000020978	elavl3	68	36.667	ENSHBUG00000021196	rbms3	60	36.667
ENSHBUG00000020978	elavl3	74	41.860	ENSHBUG00000001061	celf3a	57	41.860
ENSHBUG00000020978	elavl3	66	36.667	ENSHBUG00000023230	rbms2a	56	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000020978	elavl3	100	86.111	ENSG00000196361	ELAVL3	100	87.222	Homo_sapiens
ENSHBUG00000020978	elavl3	99	100.000	ENSAPOG00000017565	elavl3	99	100.000	Acanthochromis_polyacanthus
ENSHBUG00000020978	elavl3	100	85.515	ENSAMEG00000010487	ELAVL3	100	86.630	Ailuropoda_melanoleuca
ENSHBUG00000020978	elavl3	99	100.000	ENSACIG00000024190	elavl3	99	100.000	Amphilophus_citrinellus
ENSHBUG00000020978	elavl3	100	99.711	ENSAOCG00000005054	elavl3	100	99.711	Amphiprion_ocellaris
ENSHBUG00000020978	elavl3	100	100.000	ENSAPEG00000011145	elavl3	100	100.000	Amphiprion_percula
ENSHBUG00000020978	elavl3	98	100.000	ENSATEG00000020941	elavl3	99	100.000	Anabas_testudineus
ENSHBUG00000020978	elavl3	98	90.000	ENSACAG00000016958	ELAVL3	93	90.000	Anolis_carolinensis
ENSHBUG00000020978	elavl3	100	86.351	ENSANAG00000030798	ELAVL3	100	87.465	Aotus_nancymaae
ENSHBUG00000020978	elavl3	100	100.000	ENSACLG00000018260	elavl3	100	100.000	Astatotilapia_calliptera
ENSHBUG00000020978	elavl3	100	98.864	ENSAMXG00000040498	elavl3	100	98.864	Astyanax_mexicanus
ENSHBUG00000020978	elavl3	100	86.389	ENSBTAG00000014412	ELAVL3	100	87.500	Bos_taurus
ENSHBUG00000020978	elavl3	100	85.014	ENSCJAG00000005589	ELAVL3	100	86.104	Callithrix_jacchus
ENSHBUG00000020978	elavl3	100	85.014	ENSCAFG00000017350	ELAVL3	100	86.104	Canis_familiaris
ENSHBUG00000020978	elavl3	100	88.728	ENSCAFG00020004614	ELAVL3	96	91.343	Canis_lupus_dingo
ENSHBUG00000020978	elavl3	99	85.399	ENSCHIG00000003436	ELAVL3	99	86.501	Capra_hircus
ENSHBUG00000020978	elavl3	99	85.124	ENSTSYG00000036621	ELAVL3	99	86.226	Carlito_syrichta
ENSHBUG00000020978	elavl3	89	71.914	ENSCAPG00000017620	ELAVL3	99	73.148	Cavia_aperea
ENSHBUG00000020978	elavl3	89	71.914	ENSCPOG00000001793	ELAVL3	99	73.148	Cavia_porcellus
ENSHBUG00000020978	elavl3	100	86.464	ENSCCAG00000034350	ELAVL3	100	87.569	Cebus_capucinus
ENSHBUG00000020978	elavl3	100	85.014	ENSCATG00000044086	ELAVL3	100	86.104	Cercocebus_atys
ENSHBUG00000020978	elavl3	100	84.741	ENSCLAG00000016404	ELAVL3	100	85.831	Chinchilla_lanigera
ENSHBUG00000020978	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSHBUG00000020978	elavl3	99	92.711	ENSCPBG00000023982	ELAVL3	100	89.444	Chrysemys_picta_bellii
ENSHBUG00000020978	elavl3	99	86.351	ENSCANG00000038728	ELAVL3	100	87.465	Colobus_angolensis_palliatus
ENSHBUG00000020978	elavl3	100	84.469	ENSCGRG00001018927	Elavl3	100	85.559	Cricetulus_griseus_chok1gshd
ENSHBUG00000020978	elavl3	99	84.573	ENSCGRG00000007158	Elavl3	99	85.675	Cricetulus_griseus_crigri
ENSHBUG00000020978	elavl3	100	98.261	ENSCSEG00000021095	elavl3	100	98.261	Cynoglossus_semilaevis
ENSHBUG00000020978	elavl3	100	99.716	ENSCVAG00000014060	elavl3	100	99.716	Cyprinodon_variegatus
ENSHBUG00000020978	elavl3	100	99.420	ENSDARG00000014420	elavl3	100	99.420	Danio_rerio
ENSHBUG00000020978	elavl3	99	84.831	ENSDORG00000002538	Elavl3	99	85.955	Dipodomys_ordii
ENSHBUG00000020978	elavl3	100	85.014	ENSEASG00005004561	ELAVL3	100	86.104	Equus_asinus_asinus
ENSHBUG00000020978	elavl3	98	89.971	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSHBUG00000020978	elavl3	100	98.017	ENSELUG00000023043	elavl3	100	98.017	Esox_lucius
ENSHBUG00000020978	elavl3	100	85.014	ENSFCAG00000024763	ELAVL3	100	86.104	Felis_catus
ENSHBUG00000020978	elavl3	99	86.550	ENSFDAG00000008449	ELAVL3	99	86.550	Fukomys_damarensis
ENSHBUG00000020978	elavl3	100	99.420	ENSFHEG00000001675	elavl3	100	99.420	Fundulus_heteroclitus
ENSHBUG00000020978	elavl3	100	96.369	ENSGMOG00000003760	elavl3	100	96.369	Gadus_morhua
ENSHBUG00000020978	elavl3	50	62.500	ENSGALG00000054488	-	77	65.289	Gallus_gallus
ENSHBUG00000020978	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSHBUG00000020978	elavl3	99	96.620	ENSGAFG00000016015	elavl3	98	96.620	Gambusia_affinis
ENSHBUG00000020978	elavl3	99	99.427	ENSGACG00000013839	elavl3	99	99.427	Gasterosteus_aculeatus
ENSHBUG00000020978	elavl3	83	91.810	ENSGAGG00000016141	ELAVL3	99	92.174	Gopherus_agassizii
ENSHBUG00000020978	elavl3	99	85.124	ENSGGOG00000008635	ELAVL3	99	86.226	Gorilla_gorilla
ENSHBUG00000020978	elavl3	100	85.014	ENSHGLG00000015199	ELAVL3	100	86.104	Heterocephalus_glaber_female
ENSHBUG00000020978	elavl3	83	67.361	ENSHGLG00000019379	-	97	67.361	Heterocephalus_glaber_female
ENSHBUG00000020978	elavl3	95	83.381	ENSHGLG00100011200	ELAVL3	100	84.527	Heterocephalus_glaber_male
ENSHBUG00000020978	elavl3	100	99.716	ENSHCOG00000015894	elavl3	100	99.716	Hippocampus_comes
ENSHBUG00000020978	elavl3	99	98.834	ENSIPUG00000013002	elavl3	98	98.834	Ictalurus_punctatus
ENSHBUG00000020978	elavl3	100	85.014	ENSSTOG00000021111	ELAVL3	100	86.104	Ictidomys_tridecemlineatus
ENSHBUG00000020978	elavl3	99	85.950	ENSJJAG00000023513	Elavl3	99	85.950	Jaculus_jaculus
ENSHBUG00000020978	elavl3	99	100.000	ENSKMAG00000017412	elavl3	99	100.000	Kryptolebias_marmoratus
ENSHBUG00000020978	elavl3	100	99.130	ENSLBEG00000008073	elavl3	99	99.130	Labrus_bergylta
ENSHBUG00000020978	elavl3	100	94.521	ENSLOCG00000007647	elavl3	100	94.521	Lepisosteus_oculatus
ENSHBUG00000020978	elavl3	99	85.165	ENSLAFG00000005013	ELAVL3	99	86.264	Loxodonta_africana
ENSHBUG00000020978	elavl3	99	86.835	ENSMFAG00000003692	ELAVL3	99	87.955	Macaca_fascicularis
ENSHBUG00000020978	elavl3	99	86.835	ENSMMUG00000020616	ELAVL3	99	87.955	Macaca_mulatta
ENSHBUG00000020978	elavl3	99	86.835	ENSMNEG00000043973	ELAVL3	100	87.465	Macaca_nemestrina
ENSHBUG00000020978	elavl3	97	82.857	ENSMLEG00000013976	ELAVL3	100	82.857	Mandrillus_leucophaeus
ENSHBUG00000020978	elavl3	99	99.415	ENSMAMG00000011697	elavl3	99	99.415	Mastacembelus_armatus
ENSHBUG00000020978	elavl3	100	100.000	ENSMZEG00005019053	elavl3	100	100.000	Maylandia_zebra
ENSHBUG00000020978	elavl3	99	84.573	ENSMAUG00000016478	Elavl3	99	85.675	Mesocricetus_auratus
ENSHBUG00000020978	elavl3	99	85.165	ENSMICG00000016528	ELAVL3	99	86.264	Microcebus_murinus
ENSHBUG00000020978	elavl3	100	84.469	ENSMOCG00000002046	Elavl3	100	85.559	Microtus_ochrogaster
ENSHBUG00000020978	elavl3	99	100.000	ENSMMOG00000012154	elavl3	99	100.000	Mola_mola
ENSHBUG00000020978	elavl3	100	87.187	ENSMODG00000006653	ELAVL3	93	87.187	Monodelphis_domestica
ENSHBUG00000020978	elavl3	99	96.620	ENSMALG00000016659	elavl3	99	96.620	Monopterus_albus
ENSHBUG00000020978	elavl3	100	84.469	MGP_CAROLIEiJ_G0031894	Elavl3	100	87.500	Mus_caroli
ENSHBUG00000020978	elavl3	100	84.469	ENSMUSG00000003410	Elavl3	100	85.559	Mus_musculus
ENSHBUG00000020978	elavl3	100	84.196	MGP_PahariEiJ_G0014760	Elavl3	100	87.216	Mus_pahari
ENSHBUG00000020978	elavl3	51	82.609	MGP_SPRETEiJ_G0033017	-	51	82.609	Mus_spretus
ENSHBUG00000020978	elavl3	100	84.741	ENSMPUG00000005040	ELAVL3	100	85.831	Mustela_putorius_furo
ENSHBUG00000020978	elavl3	99	86.538	ENSMLUG00000016320	ELAVL3	99	86.538	Myotis_lucifugus
ENSHBUG00000020978	elavl3	100	85.014	ENSNGAG00000000968	Elavl3	100	86.104	Nannospalax_galili
ENSHBUG00000020978	elavl3	100	96.100	ENSNBRG00000010319	elavl3	100	96.100	Neolamprologus_brichardi
ENSHBUG00000020978	elavl3	99	88.981	ENSMEUG00000016706	ELAVL3	99	88.981	Notamacropus_eugenii
ENSHBUG00000020978	elavl3	85	89.362	ENSOPRG00000007373	ELAVL3	97	87.866	Ochotona_princeps
ENSHBUG00000020978	elavl3	100	85.014	ENSODEG00000015790	ELAVL3	100	86.104	Octodon_degus
ENSHBUG00000020978	elavl3	99	96.620	ENSONIG00000001538	elavl3	98	96.620	Oreochromis_niloticus
ENSHBUG00000020978	elavl3	88	88.095	ENSOANG00000015046	ELAVL3	98	88.095	Ornithorhynchus_anatinus
ENSHBUG00000020978	elavl3	100	96.369	ENSORLG00000005379	elavl3	100	96.369	Oryzias_latipes
ENSHBUG00000020978	elavl3	100	99.710	ENSORLG00020004570	elavl3	100	99.710	Oryzias_latipes_hni
ENSHBUG00000020978	elavl3	100	95.531	ENSORLG00015000662	elavl3	100	95.531	Oryzias_latipes_hsok
ENSHBUG00000020978	elavl3	100	99.420	ENSOMEG00000023959	elavl3	100	99.420	Oryzias_melastigma
ENSHBUG00000020978	elavl3	100	85.014	ENSOGAG00000007072	ELAVL3	100	86.104	Otolemur_garnettii
ENSHBUG00000020978	elavl3	100	85.286	ENSOARG00000018464	ELAVL3	100	86.376	Ovis_aries
ENSHBUG00000020978	elavl3	100	85.014	ENSPPAG00000033972	ELAVL3	100	86.104	Pan_paniscus
ENSHBUG00000020978	elavl3	100	85.014	ENSPPRG00000005151	ELAVL3	100	86.104	Panthera_pardus
ENSHBUG00000020978	elavl3	97	85.251	ENSPTIG00000013610	ELAVL3	97	86.431	Panthera_tigris_altaica
ENSHBUG00000020978	elavl3	100	85.014	ENSPTRG00000010506	ELAVL3	100	86.104	Pan_troglodytes
ENSHBUG00000020978	elavl3	99	86.835	ENSPANG00000005849	ELAVL3	99	87.955	Papio_anubis
ENSHBUG00000020978	elavl3	100	98.841	ENSPKIG00000016207	elavl3	100	98.841	Paramormyrops_kingsleyae
ENSHBUG00000020978	elavl3	100	99.710	ENSPMGG00000002016	elavl3	100	99.710	Periophthalmus_magnuspinnatus
ENSHBUG00000020978	elavl3	98	92.412	ENSPFOG00000007754	elavl3	100	92.412	Poecilia_formosa
ENSHBUG00000020978	elavl3	98	100.000	ENSPLAG00000001547	elavl3	99	100.000	Poecilia_latipinna
ENSHBUG00000020978	elavl3	98	100.000	ENSPMEG00000010156	elavl3	99	100.000	Poecilia_mexicana
ENSHBUG00000020978	elavl3	100	99.420	ENSPREG00000006971	elavl3	100	99.420	Poecilia_reticulata
ENSHBUG00000020978	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSHBUG00000020978	elavl3	82	88.182	ENSPCAG00000015952	ELAVL3	59	90.909	Procavia_capensis
ENSHBUG00000020978	elavl3	100	85.014	ENSPCOG00000023781	ELAVL3	100	86.104	Propithecus_coquereli
ENSHBUG00000020978	elavl3	100	85.014	ENSPVAG00000014893	ELAVL3	100	86.104	Pteropus_vampyrus
ENSHBUG00000020978	elavl3	100	100.000	ENSPNYG00000013186	elavl3	98	100.000	Pundamilia_nyererei
ENSHBUG00000020978	elavl3	100	99.420	ENSPNAG00000003633	elavl3	100	99.420	Pygocentrus_nattereri
ENSHBUG00000020978	elavl3	100	84.469	ENSRNOG00000013752	Elavl3	100	85.559	Rattus_norvegicus
ENSHBUG00000020978	elavl3	98	87.535	ENSRBIG00000034762	ELAVL3	99	88.669	Rhinopithecus_bieti
ENSHBUG00000020978	elavl3	89	87.600	ENSRROG00000034305	ELAVL3	95	90.909	Rhinopithecus_roxellana
ENSHBUG00000020978	elavl3	99	85.124	ENSSBOG00000030047	ELAVL3	100	90.385	Saimiri_boliviensis_boliviensis
ENSHBUG00000020978	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSHBUG00000020978	elavl3	98	94.970	ENSSFOG00015023630	elavl3	100	98.769	Scleropages_formosus
ENSHBUG00000020978	elavl3	99	99.123	ENSSMAG00000004671	elavl3	99	99.123	Scophthalmus_maximus
ENSHBUG00000020978	elavl3	99	100.000	ENSSDUG00000020708	elavl3	99	100.000	Seriola_dumerili
ENSHBUG00000020978	elavl3	100	100.000	ENSSLDG00000013769	elavl3	100	100.000	Seriola_lalandi_dorsalis
ENSHBUG00000020978	elavl3	99	75.275	ENSSARG00000005949	ELAVL3	99	76.374	Sorex_araneus
ENSHBUG00000020978	elavl3	99	99.419	ENSSPAG00000000990	elavl3	100	99.419	Stegastes_partitus
ENSHBUG00000020978	elavl3	100	85.014	ENSSSCG00000013617	ELAVL3	100	86.104	Sus_scrofa
ENSHBUG00000020978	elavl3	98	100.000	ENSTRUG00000010719	elavl3	99	100.000	Takifugu_rubripes
ENSHBUG00000020978	elavl3	99	95.810	ENSTNIG00000018572	elavl3	99	95.810	Tetraodon_nigroviridis
ENSHBUG00000020978	elavl3	97	81.902	ENSTBEG00000006133	ELAVL3	99	83.129	Tupaia_belangeri
ENSHBUG00000020978	elavl3	100	84.741	ENSTTRG00000001789	ELAVL3	100	85.831	Tursiops_truncatus
ENSHBUG00000020978	elavl3	97	90.149	ENSUAMG00000000405	ELAVL3	99	88.352	Ursus_americanus
ENSHBUG00000020978	elavl3	98	83.389	ENSUMAG00000019546	ELAVL3	88	84.718	Ursus_maritimus
ENSHBUG00000020978	elavl3	100	86.111	ENSVVUG00000023733	ELAVL3	100	87.222	Vulpes_vulpes
ENSHBUG00000020978	elavl3	100	91.643	ENSXETG00000016741	elavl3	100	91.643	Xenopus_tropicalis
ENSHBUG00000020978	elavl3	100	99.420	ENSXMAG00000018287	elavl3	100	99.420	Xiphophorus_maculatus