EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000021172 (Gene tree)
Gene ID
102289092
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Minus strand
Length
16515 bases
Position
chrJH425402.1:666858-683372
Accession
102289092
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000018818ResIIIPF04851.157.2e-0911
ENSHBUP00000033785ResIIIPF04851.157.3e-0911
ENSHBUP00000018834ResIIIPF04851.157.3e-0911
ENSHBUP00000033823ResIIIPF04851.157.4e-0911
ENSHBUP00000018818BRKPF07533.166.3e-1711
ENSHBUP00000033785BRKPF07533.166.4e-1711
ENSHBUP00000018834BRKPF07533.166.4e-1711
ENSHBUP00000033823BRKPF07533.166.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000027994-6202XM_005926693ENSHBUP000000188341641 (aa)XP_005926755UPI0003BDC615
ENSHBUT00000027944-4899-ENSHBUP000000337851632 (aa)--
ENSHBUT00000027975-5901XM_005926694ENSHBUP000000188181628 (aa)XP_005926756UPI0003BC7CE6
ENSHBUT00000028013-6863-ENSHBUP000000338231660 (aa)--
Gene Model
Click here to download ENSHBUG00000021172's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000021172's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000021172smarca4a9971.779ENSHBUG00000006691SMARCA29472.143
ENSHBUG00000021172smarca4a10085.397ENSHBUG00000005447-9885.724
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000021172smarca4a10087.637ENSG00000127616SMARCA49995.652Homo_sapiens
ENSHBUG00000021172smarca4a9584.903ENSAPOG00000004542SMARCA49986.132Acanthochromis_polyacanthus
ENSHBUG00000021172smarca4a7694.151ENSAPOG00000003509smarca4a9894.231Acanthochromis_polyacanthus
ENSHBUG00000021172smarca4a10083.744ENSAMEG00000010868SMARCA410084.096Ailuropoda_melanoleuca
ENSHBUG00000021172smarca4a9997.597ENSACIG00000021550smarca4a9997.600Amphilophus_citrinellus
ENSHBUG00000021172smarca4a9585.032ENSACIG00000003035-9786.597Amphilophus_citrinellus
ENSHBUG00000021172smarca4a9486.606ENSAOCG00000009450-9788.161Amphiprion_ocellaris
ENSHBUG00000021172smarca4a9092.867ENSAOCG00000019167smarca4a10093.051Amphiprion_ocellaris
ENSHBUG00000021172smarca4a9092.936ENSAPEG00000015559smarca4a10093.120Amphiprion_percula
ENSHBUG00000021172smarca4a10084.232ENSAPEG00000023108-9983.613Amphiprion_percula
ENSHBUG00000021172smarca4a9985.375ENSATEG00000001094-9884.948Anabas_testudineus
ENSHBUG00000021172smarca4a10094.969ENSATEG00000011524smarca4a10095.521Anabas_testudineus
ENSHBUG00000021172smarca4a9987.315ENSANAG00000036991SMARCA410084.583Aotus_nancymaae
ENSHBUG00000021172smarca4a9585.517ENSACLG00000008638-9885.200Astatotilapia_calliptera
ENSHBUG00000021172smarca4a9899.813ENSACLG00000000163smarca4a9999.813Astatotilapia_calliptera
ENSHBUG00000021172smarca4a9886.352ENSAMXG00000021023smarca4a9887.404Astyanax_mexicanus
ENSHBUG00000021172smarca4a9487.565ENSAMXG00000011238-9685.683Astyanax_mexicanus
ENSHBUG00000021172smarca4a10088.120ENSBTAG00000019220SMARCA49887.900Bos_taurus
ENSHBUG00000021172smarca4a10083.665ENSCJAG00000005936SMARCA410084.368Callithrix_jacchus
ENSHBUG00000021172smarca4a10087.508ENSCAFG00000017584SMARCA410087.629Canis_familiaris
ENSHBUG00000021172smarca4a10087.508ENSCAFG00020024620SMARCA49987.629Canis_lupus_dingo
ENSHBUG00000021172smarca4a10084.281ENSCHIG00000015318SMARCA49883.970Capra_hircus
ENSHBUG00000021172smarca4a10087.691ENSTSYG00000012966SMARCA410087.998Carlito_syrichta
ENSHBUG00000021172smarca4a9481.111ENSCAPG00000015932SMARCA49490.121Cavia_aperea
ENSHBUG00000021172smarca4a10087.447ENSCPOG00000015549SMARCA410087.447Cavia_porcellus
ENSHBUG00000021172smarca4a10084.313ENSCCAG00000031660SMARCA49984.625Cebus_capucinus
ENSHBUG00000021172smarca4a10087.584ENSCATG00000029530SMARCA410087.645Cercocebus_atys
ENSHBUG00000021172smarca4a10087.745ENSCLAG00000011946SMARCA410087.929Chinchilla_lanigera
ENSHBUG00000021172smarca4a10087.553ENSCPBG00000009994SMARCA49988.401Chrysemys_picta_bellii
ENSHBUG00000021172smarca4a10087.523ENSCANG00000036013SMARCA410087.645Colobus_angolensis_palliatus
ENSHBUG00000021172smarca4a10087.508ENSCGRG00001016732Smarca410087.508Cricetulus_griseus_chok1gshd
ENSHBUG00000021172smarca4a10087.508ENSCGRG00000017242Smarca410087.508Cricetulus_griseus_crigri
ENSHBUG00000021172smarca4a9694.413ENSCSEG00000014771smarca4a10094.611Cynoglossus_semilaevis
ENSHBUG00000021172smarca4a9984.220ENSCVAG00000003018-9885.768Cyprinodon_variegatus
ENSHBUG00000021172smarca4a9994.041ENSCVAG00000006979smarca4a9994.227Cyprinodon_variegatus
ENSHBUG00000021172smarca4a9284.605ENSDARG00000104339SMARCA49583.873Danio_rerio
ENSHBUG00000021172smarca4a10090.006ENSDARG00000077226smarca4a10089.731Danio_rerio
ENSHBUG00000021172smarca4a10079.312ENSDNOG00000048847SMARCA49091.432Dasypus_novemcinctus
ENSHBUG00000021172smarca4a8482.417ENSDORG00000002544Smarca49381.701Dipodomys_ordii
ENSHBUG00000021172smarca4a9477.119ENSETEG00000013361SMARCA49477.282Echinops_telfairi
ENSHBUG00000021172smarca4a10087.386ENSEASG00005006167SMARCA410085.561Equus_asinus_asinus
ENSHBUG00000021172smarca4a10087.447ENSECAG00000008334SMARCA410087.447Equus_caballus
ENSHBUG00000021172smarca4a9879.463ENSELUG00000023232-9778.780Esox_lucius
ENSHBUG00000021172smarca4a10091.019ENSELUG00000010247smarca4a10090.959Esox_lucius
ENSHBUG00000021172smarca4a10087.470ENSFCAG00000004894SMARCA410087.530Felis_catus
ENSHBUG00000021172smarca4a7391.688ENSFALG00000004208SMARCA49286.448Ficedula_albicollis
ENSHBUG00000021172smarca4a9287.375ENSFDAG00000012237SMARCA49788.537Fukomys_damarensis
ENSHBUG00000021172smarca4a10085.595ENSFHEG00000007902-9885.903Fundulus_heteroclitus
ENSHBUG00000021172smarca4a9692.767ENSFHEG00000010182smarca4a10092.961Fundulus_heteroclitus
ENSHBUG00000021172smarca4a9081.373ENSGMOG00000005756-9081.561Gadus_morhua
ENSHBUG00000021172smarca4a8992.373ENSGMOG00000002649smarca4a9489.881Gadus_morhua
ENSHBUG00000021172smarca4a7288.305ENSGALG00000047145SMARCA410087.966Gallus_gallus
ENSHBUG00000021172smarca4a9982.236ENSGAFG00000008827-9883.176Gambusia_affinis
ENSHBUG00000021172smarca4a9092.603ENSGAFG00000014900smarca4a9993.515Gambusia_affinis
ENSHBUG00000021172smarca4a9893.805ENSGACG00000006691smarca4a9993.498Gasterosteus_aculeatus
ENSHBUG00000021172smarca4a9980.589ENSGACG00000016033-9980.168Gasterosteus_aculeatus
ENSHBUG00000021172smarca4a10087.775ENSGAGG00000016757SMARCA49988.631Gopherus_agassizii
ENSHBUG00000021172smarca4a10087.584ENSGGOG00000009882SMARCA410087.645Gorilla_gorilla
ENSHBUG00000021172smarca4a10086.893ENSHGLG00000010519SMARCA410087.015Heterocephalus_glaber_female
ENSHBUG00000021172smarca4a10086.853ENSHGLG00100013774SMARCA410086.496Heterocephalus_glaber_male
ENSHBUG00000021172smarca4a9794.494ENSHCOG00000009510smarca4a9694.968Hippocampus_comes
ENSHBUG00000021172smarca4a9885.866ENSIPUG00000016346-9785.352Ictalurus_punctatus
ENSHBUG00000021172smarca4a10090.305ENSIPUG00000006107smarca4a10089.927Ictalurus_punctatus
ENSHBUG00000021172smarca4a10087.386ENSSTOG00000007939SMARCA410087.447Ictidomys_tridecemlineatus
ENSHBUG00000021172smarca4a10085.962ENSJJAG00000012877Smarca410085.902Jaculus_jaculus
ENSHBUG00000021172smarca4a10085.125ENSKMAG00000019518-9888.409Kryptolebias_marmoratus
ENSHBUG00000021172smarca4a10094.424ENSKMAG00000011931smarca4a10094.547Kryptolebias_marmoratus
ENSHBUG00000021172smarca4a9981.970ENSLBEG00000020655-9881.818Labrus_bergylta
ENSHBUG00000021172smarca4a9791.677ENSLBEG00000017383smarca4a9791.330Labrus_bergylta
ENSHBUG00000021172smarca4a5083.696ENSLACG00000015309SMARCA410083.918Latimeria_chalumnae
ENSHBUG00000021172smarca4a10087.194ENSLOCG00000007820smarca4a9987.288Lepisosteus_oculatus
ENSHBUG00000021172smarca4a10087.409ENSLAFG00000001433SMARCA410087.470Loxodonta_africana
ENSHBUG00000021172smarca4a10087.584ENSMFAG00000032146SMARCA49987.645Macaca_fascicularis
ENSHBUG00000021172smarca4a10087.584ENSMMUG00000012042SMARCA410087.645Macaca_mulatta
ENSHBUG00000021172smarca4a10087.569ENSMNEG00000028512SMARCA410087.629Macaca_nemestrina
ENSHBUG00000021172smarca4a10087.584ENSMLEG00000034976SMARCA410087.424Mandrillus_leucophaeus
ENSHBUG00000021172smarca4a9984.499ENSMAMG00000002841-9888.459Mastacembelus_armatus
ENSHBUG00000021172smarca4a10096.076ENSMAMG00000009256smarca4a10096.076Mastacembelus_armatus
ENSHBUG00000021172smarca4a10099.877ENSMZEG00005003889smarca4a10099.877Maylandia_zebra
ENSHBUG00000021172smarca4a9586.094ENSMZEG00005023861-9884.820Maylandia_zebra
ENSHBUG00000021172smarca4a10087.287ENSMAUG00000020731Smarca410087.226Mesocricetus_auratus
ENSHBUG00000021172smarca4a10087.409ENSMICG00000009806SMARCA410087.470Microcebus_murinus
ENSHBUG00000021172smarca4a10086.983ENSMOCG00000022209Smarca410087.226Microtus_ochrogaster
ENSHBUG00000021172smarca4a9982.054ENSMMOG00000008466-9882.754Mola_mola
ENSHBUG00000021172smarca4a9593.802ENSMMOG00000007571smarca4a9893.157Mola_mola
ENSHBUG00000021172smarca4a10086.647ENSMODG00000006287SMARCA410086.407Monodelphis_domestica
ENSHBUG00000021172smarca4a10095.313ENSMALG00000003388smarca4a10095.767Monopterus_albus
ENSHBUG00000021172smarca4a8984.362ENSMALG00000021534-9684.615Monopterus_albus
ENSHBUG00000021172smarca4a10087.378MGP_CAROLIEiJ_G0031879Smarca410087.378Mus_caroli
ENSHBUG00000021172smarca4a10087.378ENSMUSG00000032187Smarca410087.378Mus_musculus
ENSHBUG00000021172smarca4a10087.821MGP_PahariEiJ_G0014745Smarca410087.699Mus_pahari
ENSHBUG00000021172smarca4a10087.378MGP_SPRETEiJ_G0033003Smarca410087.378Mus_spretus
ENSHBUG00000021172smarca4a10087.508ENSMPUG00000005711SMARCA410087.569Mustela_putorius_furo
ENSHBUG00000021172smarca4a10087.751ENSMLUG00000004491-10087.195Myotis_lucifugus
ENSHBUG00000021172smarca4a10087.599ENSNGAG00000021852Smarca410087.477Nannospalax_galili
ENSHBUG00000021172smarca4a8885.734ENSNBRG00000018865-9985.665Neolamprologus_brichardi
ENSHBUG00000021172smarca4a9795.105ENSNBRG00000011457smarca4a9895.356Neolamprologus_brichardi
ENSHBUG00000021172smarca4a10082.095ENSNLEG00000012389SMARCA49485.407Nomascus_leucogenys
ENSHBUG00000021172smarca4a80100.000ENSOPRG00000000885-78100.000Ochotona_princeps
ENSHBUG00000021172smarca4a10085.662ENSODEG00000017127SMARCA410085.358Octodon_degus
ENSHBUG00000021172smarca4a10099.386ENSONIG00000008196smarca4a10099.386Oreochromis_niloticus
ENSHBUG00000021172smarca4a10085.577ENSONIG00000018040-9984.470Oreochromis_niloticus
ENSHBUG00000021172smarca4a9882.018ENSOCUG00000001787SMARCA49882.717Oryctolagus_cuniculus
ENSHBUG00000021172smarca4a9584.950ENSORLG00000003955-9983.470Oryzias_latipes
ENSHBUG00000021172smarca4a10093.505ENSORLG00000015452smarca4a10093.505Oryzias_latipes
ENSHBUG00000021172smarca4a9584.896ENSORLG00020009728-9983.417Oryzias_latipes_hni
ENSHBUG00000021172smarca4a10093.137ENSORLG00020004611smarca4a10093.566Oryzias_latipes_hni
ENSHBUG00000021172smarca4a9984.498ENSORLG00015007739-9584.154Oryzias_latipes_hsok
ENSHBUG00000021172smarca4a10093.199ENSORLG00015016560smarca4a10093.566Oryzias_latipes_hsok
ENSHBUG00000021172smarca4a10094.298ENSOMEG00000007486smarca4a10094.298Oryzias_melastigma
ENSHBUG00000021172smarca4a9784.969ENSOMEG00000016626-9584.543Oryzias_melastigma
ENSHBUG00000021172smarca4a9085.580ENSOGAG00000016148SMARCA410086.671Otolemur_garnettii
ENSHBUG00000021172smarca4a10087.576ENSOARG00000017454SMARCA49887.524Ovis_aries
ENSHBUG00000021172smarca4a10087.584ENSPPAG00000043191SMARCA410087.645Pan_paniscus
ENSHBUG00000021172smarca4a10087.470ENSPPRG00000000064SMARCA410087.530Panthera_pardus
ENSHBUG00000021172smarca4a7986.898ENSPTIG00000017447SMARCA410081.650Panthera_tigris_altaica
ENSHBUG00000021172smarca4a10087.584ENSPTRG00000010488SMARCA410087.645Pan_troglodytes
ENSHBUG00000021172smarca4a10087.690ENSPANG00000011042SMARCA49987.751Papio_anubis
ENSHBUG00000021172smarca4a10089.781ENSPKIG00000007770SMARCA410090.570Paramormyrops_kingsleyae
ENSHBUG00000021172smarca4a10086.695ENSPKIG00000010087-9887.437Paramormyrops_kingsleyae
ENSHBUG00000021172smarca4a10082.596ENSPSIG00000005547SMARCA410082.663Pelodiscus_sinensis
ENSHBUG00000021172smarca4a10087.165ENSPEMG00000020389Smarca410087.165Peromyscus_maniculatus_bairdii
ENSHBUG00000021172smarca4a10088.156ENSPCIG00000017138SMARCA410087.912Phascolarctos_cinereus
ENSHBUG00000021172smarca4a10091.621ENSPFOG00000007892smarca4a10092.532Poecilia_formosa
ENSHBUG00000021172smarca4a10084.794ENSPFOG00000012930-9984.555Poecilia_formosa
ENSHBUG00000021172smarca4a10091.743ENSPLAG00000014294smarca4a10092.653Poecilia_latipinna
ENSHBUG00000021172smarca4a9986.265ENSPLAG00000018616-9887.705Poecilia_latipinna
ENSHBUG00000021172smarca4a9592.273ENSPMEG00000003725smarca4a9693.031Poecilia_mexicana
ENSHBUG00000021172smarca4a9586.203ENSPMEG00000008929-9886.094Poecilia_mexicana
ENSHBUG00000021172smarca4a9585.588ENSPREG00000014823-9684.959Poecilia_reticulata
ENSHBUG00000021172smarca4a9891.119ENSPREG00000014608smarca4a10092.010Poecilia_reticulata
ENSHBUG00000021172smarca4a10085.621ENSPPYG00000009568SMARCA410085.979Pongo_abelii
ENSHBUG00000021172smarca4a7986.755ENSPCAG00000014054SMARCA47592.969Procavia_capensis
ENSHBUG00000021172smarca4a10087.508ENSPCOG00000023011SMARCA410087.409Propithecus_coquereli
ENSHBUG00000021172smarca4a9582.491ENSPVAG00000007787SMARCA49681.193Pteropus_vampyrus
ENSHBUG00000021172smarca4a9799.873ENSPNYG00000000717smarca4a9899.873Pundamilia_nyererei
ENSHBUG00000021172smarca4a9585.032ENSPNYG00000023995-9886.137Pundamilia_nyererei
ENSHBUG00000021172smarca4a9587.524ENSPNAG00000006636-9387.895Pygocentrus_nattereri
ENSHBUG00000021172smarca4a9884.635ENSPNAG00000024136smarca4a9786.497Pygocentrus_nattereri
ENSHBUG00000021172smarca4a10087.378ENSRNOG00000009271Smarca410087.378Rattus_norvegicus
ENSHBUG00000021172smarca4a10087.523ENSRBIG00000038696SMARCA49987.584Rhinopithecus_bieti
ENSHBUG00000021172smarca4a10087.523ENSRROG00000045509SMARCA410087.584Rhinopithecus_roxellana
ENSHBUG00000021172smarca4a10087.333ENSSBOG00000026896SMARCA49690.935Saimiri_boliviensis_boliviensis
ENSHBUG00000021172smarca4a10087.912ENSSHAG00000001642SMARCA410087.912Sarcophilus_harrisii
ENSHBUG00000021172smarca4a10091.214ENSSFOG00015013823smarca410090.759Scleropages_formosus
ENSHBUG00000021172smarca4a9685.032ENSSFOG00015009921-9590.438Scleropages_formosus
ENSHBUG00000021172smarca4a10082.476ENSSMAG00000014082-9982.688Scophthalmus_maximus
ENSHBUG00000021172smarca4a10094.836ENSSMAG00000003200smarca4a10095.079Scophthalmus_maximus
ENSHBUG00000021172smarca4a10091.448ENSSDUG00000017298smarca4a9992.758Seriola_dumerili
ENSHBUG00000021172smarca4a9986.675ENSSDUG00000005388-10084.298Seriola_dumerili
ENSHBUG00000021172smarca4a10097.263ENSSLDG00000024486smarca4a10097.263Seriola_lalandi_dorsalis
ENSHBUG00000021172smarca4a9586.920ENSSLDG00000023663-9788.794Seriola_lalandi_dorsalis
ENSHBUG00000021172smarca4a6296.894ENSSARG00000013477SMARCA48296.894Sorex_araneus
ENSHBUG00000021172smarca4a9584.537ENSSPUG00000004558SMARCA49885.084Sphenodon_punctatus
ENSHBUG00000021172smarca4a10084.401ENSSPAG00000012533-9983.904Stegastes_partitus
ENSHBUG00000021172smarca4a10096.715ENSSPAG00000004248smarca4a10096.715Stegastes_partitus
ENSHBUG00000021172smarca4a10087.713ENSSSCG00000013629SMARCA410087.591Sus_scrofa
ENSHBUG00000021172smarca4a5284.579ENSTGUG00000015488-9983.958Taeniopygia_guttata
ENSHBUG00000021172smarca4a9583.333ENSTRUG00000001378SMARCA49884.298Takifugu_rubripes
ENSHBUG00000021172smarca4a9088.090ENSTRUG00000004885smarca4a10087.817Takifugu_rubripes
ENSHBUG00000021172smarca4a7393.594ENSTNIG00000004859-10093.594Tetraodon_nigroviridis
ENSHBUG00000021172smarca4a10082.868ENSTNIG00000004536SMARCA49983.953Tetraodon_nigroviridis
ENSHBUG00000021172smarca4a10084.868ENSTTRG00000009519SMARCA410084.510Tursiops_truncatus
ENSHBUG00000021172smarca4a10087.569ENSUAMG00000014661SMARCA410087.629Ursus_americanus
ENSHBUG00000021172smarca4a9583.526ENSUMAG00000022005SMARCA49891.370Ursus_maritimus
ENSHBUG00000021172smarca4a10087.508ENSVVUG00000017820SMARCA49787.629Vulpes_vulpes
ENSHBUG00000021172smarca4a10082.812ENSXETG00000009355smarca49985.192Xenopus_tropicalis
ENSHBUG00000021172smarca4a9982.981ENSXCOG00000013494-9885.092Xiphophorus_couchianus
ENSHBUG00000021172smarca4a10085.207ENSXMAG00000007030-9984.957Xiphophorus_maculatus
ENSHBUG00000021172smarca4a10092.444ENSXMAG00000006321smarca4a10092.992Xiphophorus_maculatus

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