EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000021210 (Gene tree)
Gene ID: 102308754
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein PTB-binding 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 13733 bases
Position: chrJH425597.1:594289-608021
Accession: 102308754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000033937	RRM_1	PF00076.22	3.6e-29	1	2
ENSHBUP00000033937	RRM_1	PF00076.22	3.6e-29	2	2
ENSHBUP00000019039	RRM_1	PF00076.22	5.1e-29	1	2
ENSHBUP00000019039	RRM_1	PF00076.22	5.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000028241	-	2115	-	ENSHBUP00000033937	704 (aa)	-	-
ENSHBUT00000028257	-	3737	XM_005939907	ENSHBUP00000019039	769 (aa)	XP_005939969	UPI0003BCB15F

Gene Model

Click here to download ENSHBUG00000021210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000021210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000021210	raver1	91	51.715	ENSG00000161847	RAVER1	96	50.761	Homo_sapiens
ENSHBUG00000021210	raver1	93	87.187	ENSAPOG00000017267	raver1	92	86.986	Acanthochromis_polyacanthus
ENSHBUG00000021210	raver1	93	88.424	ENSAOCG00000005128	raver1	97	88.203	Amphiprion_ocellaris
ENSHBUG00000021210	raver1	93	88.285	ENSAPEG00000010854	raver1	99	88.066	Amphiprion_percula
ENSHBUG00000021210	raver1	98	79.526	ENSATEG00000021004	raver1	99	83.862	Anabas_testudineus
ENSHBUG00000021210	raver1	66	55.800	ENSACAG00000008386	-	74	55.945	Anolis_carolinensis
ENSHBUG00000021210	raver1	75	82.353	ENSANAG00000028226	RAVER1	71	82.353	Aotus_nancymaae
ENSHBUG00000021210	raver1	100	99.006	ENSACLG00000018492	raver1	100	99.006	Astatotilapia_calliptera
ENSHBUG00000021210	raver1	97	66.761	ENSAMXG00000005132	raver1	100	66.343	Astyanax_mexicanus
ENSHBUG00000021210	raver1	75	78.723	ENSBTAG00000015721	RAVER1	96	52.098	Bos_taurus
ENSHBUG00000021210	raver1	91	52.180	ENSCAFG00000017861	RAVER1	93	51.146	Canis_familiaris
ENSHBUG00000021210	raver1	91	52.180	ENSCAFG00020024449	RAVER1	95	51.146	Canis_lupus_dingo
ENSHBUG00000021210	raver1	91	50.909	ENSCHIG00000006718	RAVER1	73	61.905	Capra_hircus
ENSHBUG00000021210	raver1	51	68.785	ENSTSYG00000027107	RAVER1	67	68.320	Carlito_syrichta
ENSHBUG00000021210	raver1	76	82.353	ENSCAPG00000002269	RAVER1	75	82.353	Cavia_aperea
ENSHBUG00000021210	raver1	75	82.353	ENSCPOG00000001008	RAVER1	74	82.353	Cavia_porcellus
ENSHBUG00000021210	raver1	68	61.317	ENSCCAG00000031723	RAVER1	65	60.986	Cebus_capucinus
ENSHBUG00000021210	raver1	68	60.905	ENSCATG00000043863	RAVER1	93	50.899	Cercocebus_atys
ENSHBUG00000021210	raver1	68	60.905	ENSCSAG00000007317	RAVER1	80	50.899	Chlorocebus_sabaeus
ENSHBUG00000021210	raver1	91	50.539	ENSCPBG00000005349	-	96	51.286	Chrysemys_picta_bellii
ENSHBUG00000021210	raver1	68	60.905	ENSCANG00000008337	RAVER1	93	50.899	Colobus_angolensis_palliatus
ENSHBUG00000021210	raver1	76	84.314	ENSCGRG00001013260	-	74	84.314	Cricetulus_griseus_chok1gshd
ENSHBUG00000021210	raver1	76	84.314	ENSCGRG00000015138	-	74	84.314	Cricetulus_griseus_crigri
ENSHBUG00000021210	raver1	93	76.243	ENSCSEG00000021092	raver1	99	75.951	Cynoglossus_semilaevis
ENSHBUG00000021210	raver1	100	74.321	ENSCVAG00000013971	raver1	99	79.367	Cyprinodon_variegatus
ENSHBUG00000021210	raver1	98	63.151	ENSDARG00000052617	raver1	89	76.471	Danio_rerio
ENSHBUG00000021210	raver1	52	80.392	ENSDNOG00000035742	-	52	80.392	Dasypus_novemcinctus
ENSHBUG00000021210	raver1	69	53.452	ENSDORG00000010106	-	95	46.866	Dipodomys_ordii
ENSHBUG00000021210	raver1	52	52.419	ENSETEG00000008201	-	63	70.854	Echinops_telfairi
ENSHBUG00000021210	raver1	51	38.847	ENSEBUG00000003030	RAVER1	53	38.384	Eptatretus_burgeri
ENSHBUG00000021210	raver1	53	69.415	ENSEASG00005010544	-	68	68.966	Equus_asinus_asinus
ENSHBUG00000021210	raver1	75	82.353	ENSECAG00000024966	RAVER1	71	82.353	Equus_caballus
ENSHBUG00000021210	raver1	100	69.126	ENSELUG00000023287	raver1	99	73.014	Esox_lucius
ENSHBUG00000021210	raver1	91	50.407	ENSFCAG00000009435	RAVER1	65	66.917	Felis_catus
ENSHBUG00000021210	raver1	90	50.275	ENSFDAG00000015113	RAVER1	97	48.840	Fukomys_damarensis
ENSHBUG00000021210	raver1	92	67.098	ENSGMOG00000003649	raver1	97	71.203	Gadus_morhua
ENSHBUG00000021210	raver1	67	40.947	ENSGALG00000050608	-	51	40.947	Gallus_gallus
ENSHBUG00000021210	raver1	100	73.677	ENSGAFG00000015944	raver1	99	79.508	Gambusia_affinis
ENSHBUG00000021210	raver1	94	68.399	ENSGACG00000013818	raver1	99	74.110	Gasterosteus_aculeatus
ENSHBUG00000021210	raver1	79	66.220	ENSGAGG00000011748	-	95	68.633	Gopherus_agassizii
ENSHBUG00000021210	raver1	91	51.984	ENSGGOG00000006015	RAVER1	93	50.622	Gorilla_gorilla
ENSHBUG00000021210	raver1	90	50.000	ENSHGLG00000015460	RAVER1	73	82.353	Heterocephalus_glaber_female
ENSHBUG00000021210	raver1	90	50.000	ENSHGLG00100000812	RAVER1	73	82.353	Heterocephalus_glaber_male
ENSHBUG00000021210	raver1	100	71.721	ENSHCOG00000000449	raver1	97	76.197	Hippocampus_comes
ENSHBUG00000021210	raver1	98	66.479	ENSIPUG00000013153	raver1	99	68.493	Ictalurus_punctatus
ENSHBUG00000021210	raver1	91	50.954	ENSSTOG00000003241	RAVER1	96	51.105	Ictidomys_tridecemlineatus
ENSHBUG00000021210	raver1	91	49.523	ENSJJAG00000018219	-	72	84.314	Jaculus_jaculus
ENSHBUG00000021210	raver1	100	79.320	ENSKMAG00000017355	raver1	99	83.151	Kryptolebias_marmoratus
ENSHBUG00000021210	raver1	88	83.900	ENSLBEG00000008268	raver1	96	83.309	Labrus_bergylta
ENSHBUG00000021210	raver1	85	49.502	ENSLACG00000005809	-	75	86.275	Latimeria_chalumnae
ENSHBUG00000021210	raver1	98	59.428	ENSLOCG00000007500	raver1	99	61.340	Lepisosteus_oculatus
ENSHBUG00000021210	raver1	86	52.671	ENSLAFG00000003664	-	82	52.865	Loxodonta_africana
ENSHBUG00000021210	raver1	68	60.905	ENSMFAG00000037977	RAVER1	93	51.037	Macaca_fascicularis
ENSHBUG00000021210	raver1	68	60.905	ENSMMUG00000014897	RAVER1	93	50.899	Macaca_mulatta
ENSHBUG00000021210	raver1	68	60.905	ENSMNEG00000028390	RAVER1	93	50.899	Macaca_nemestrina
ENSHBUG00000021210	raver1	68	61.111	ENSMLEG00000041959	RAVER1	93	51.037	Mandrillus_leucophaeus
ENSHBUG00000021210	raver1	98	78.838	ENSMAMG00000012059	raver1	99	82.990	Mastacembelus_armatus
ENSHBUG00000021210	raver1	100	98.864	ENSMZEG00005019002	raver1	100	98.864	Maylandia_zebra
ENSHBUG00000021210	raver1	76	84.314	ENSMAUG00000017948	-	74	84.314	Mesocricetus_auratus
ENSHBUG00000021210	raver1	91	52.579	ENSMICG00000010326	RAVER1	95	51.603	Microcebus_murinus
ENSHBUG00000021210	raver1	76	84.314	ENSMOCG00000015553	-	73	84.314	Microtus_ochrogaster
ENSHBUG00000021210	raver1	98	79.253	ENSMMOG00000012093	raver1	99	82.442	Mola_mola
ENSHBUG00000021210	raver1	88	51.114	ENSMODG00000005584	-	85	51.880	Monodelphis_domestica
ENSHBUG00000021210	raver1	94	81.370	ENSMALG00000016569	raver1	99	81.370	Monopterus_albus
ENSHBUG00000021210	raver1	70	57.227	MGP_CAROLIEiJ_G0031860	-	68	57.782	Mus_caroli
ENSHBUG00000021210	raver1	76	84.314	ENSMUSG00000010205	Raver1	74	84.314	Mus_musculus
ENSHBUG00000021210	raver1	76	84.314	MGP_PahariEiJ_G0014726	-	74	84.314	Mus_pahari
ENSHBUG00000021210	raver1	76	84.314	MGP_SPRETEiJ_G0032984	-	74	84.314	Mus_spretus
ENSHBUG00000021210	raver1	74	82.353	ENSMPUG00000006712	RAVER1	71	82.353	Mustela_putorius_furo
ENSHBUG00000021210	raver1	91	51.416	ENSMLUG00000012328	RAVER1	75	55.839	Myotis_lucifugus
ENSHBUG00000021210	raver1	56	65.063	ENSNGAG00000001260	-	96	48.138	Nannospalax_galili
ENSHBUG00000021210	raver1	100	85.302	ENSNBRG00000010139	raver1	99	88.966	Neolamprologus_brichardi
ENSHBUG00000021210	raver1	68	60.700	ENSNLEG00000012181	RAVER1	93	51.046	Nomascus_leucogenys
ENSHBUG00000021210	raver1	85	51.032	ENSMEUG00000003281	-	76	86.538	Notamacropus_eugenii
ENSHBUG00000021210	raver1	57	65.111	ENSODEG00000016260	RAVER1	68	82.353	Octodon_degus
ENSHBUG00000021210	raver1	92	92.342	ENSONIG00000001559	raver1	99	95.130	Oreochromis_niloticus
ENSHBUG00000021210	raver1	75	82.353	ENSOCUG00000020918	RAVER1	71	82.353	Oryctolagus_cuniculus
ENSHBUG00000021210	raver1	100	74.454	ENSORLG00000005458	raver1	99	80.357	Oryzias_latipes
ENSHBUG00000021210	raver1	100	74.317	ENSORLG00020004392	raver1	99	80.220	Oryzias_latipes_hni
ENSHBUG00000021210	raver1	100	74.863	ENSORLG00015017222	raver1	99	80.769	Oryzias_latipes_hsok
ENSHBUG00000021210	raver1	100	75.847	ENSOMEG00000023956	raver1	99	93.182	Oryzias_melastigma
ENSHBUG00000021210	raver1	75	82.353	ENSOARG00000015886	RAVER1	71	82.353	Ovis_aries
ENSHBUG00000021210	raver1	91	51.715	ENSPPAG00000002611	RAVER1	93	50.761	Pan_paniscus
ENSHBUG00000021210	raver1	91	50.748	ENSPPRG00000009912	RAVER1	65	66.917	Panthera_pardus
ENSHBUG00000021210	raver1	91	51.715	ENSPTRG00000010466	RAVER1	93	50.761	Pan_troglodytes
ENSHBUG00000021210	raver1	68	60.905	ENSPANG00000004122	RAVER1	93	50.972	Papio_anubis
ENSHBUG00000021210	raver1	91	53.666	ENSPCIG00000018695	-	95	51.793	Phascolarctos_cinereus
ENSHBUG00000021210	raver1	100	73.271	ENSPFOG00000007016	raver1	99	78.763	Poecilia_formosa
ENSHBUG00000021210	raver1	100	72.283	ENSPLAG00000020793	raver1	99	78.490	Poecilia_latipinna
ENSHBUG00000021210	raver1	100	76.389	ENSPMEG00000011220	raver1	99	80.328	Poecilia_mexicana
ENSHBUG00000021210	raver1	100	77.949	ENSPREG00000006864	raver1	92	97.436	Poecilia_reticulata
ENSHBUG00000021210	raver1	91	51.928	ENSPPYG00000010514	RAVER1	80	50.967	Pongo_abelii
ENSHBUG00000021210	raver1	100	92.727	ENSPNYG00000013284	raver1	100	92.727	Pundamilia_nyererei
ENSHBUG00000021210	raver1	98	69.655	ENSPNAG00000015476	raver1	100	69.031	Pygocentrus_nattereri
ENSHBUG00000021210	raver1	91	49.932	ENSRNOG00000020710	Raver1	68	58.171	Rattus_norvegicus
ENSHBUG00000021210	raver1	91	52.924	ENSRBIG00000034702	RAVER1	93	52.738	Rhinopithecus_bieti
ENSHBUG00000021210	raver1	91	53.286	ENSRROG00000031186	RAVER1	93	52.594	Rhinopithecus_roxellana
ENSHBUG00000021210	raver1	91	53.736	ENSSBOG00000023423	RAVER1	93	51.511	Saimiri_boliviensis_boliviensis
ENSHBUG00000021210	raver1	85	52.711	ENSSHAG00000008181	-	89	53.605	Sarcophilus_harrisii
ENSHBUG00000021210	raver1	93	84.306	ENSSMAG00000004546	raver1	99	84.131	Scophthalmus_maximus
ENSHBUG00000021210	raver1	93	87.326	ENSSDUG00000021063	raver1	99	87.106	Seriola_dumerili
ENSHBUG00000021210	raver1	93	87.326	ENSSLDG00000014505	raver1	99	87.106	Seriola_lalandi_dorsalis
ENSHBUG00000021210	raver1	93	88.579	ENSSPAG00000000688	raver1	99	88.477	Stegastes_partitus
ENSHBUG00000021210	raver1	69	75.000	ENSSSCG00000013650	-	71	82.353	Sus_scrofa
ENSHBUG00000021210	raver1	98	74.828	ENSTRUG00000025641	raver1	99	78.112	Takifugu_rubripes
ENSHBUG00000021210	raver1	91	52.180	ENSVVUG00000028976	RAVER1	93	51.146	Vulpes_vulpes
ENSHBUG00000021210	raver1	90	51.462	ENSXETG00000011622	raver1	94	50.515	Xenopus_tropicalis
ENSHBUG00000021210	raver1	100	75.034	ENSXCOG00000016368	raver1	99	80.738	Xiphophorus_couchianus
ENSHBUG00000021210	raver1	100	75.034	ENSXMAG00000000217	raver1	99	80.738	Xiphophorus_maculatus