EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000021583 (Gene tree)
Gene ID: 102297402
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 12807 bases
Position: chrJH425436.1:140610-153416
Accession: 102297402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000019429	POP1	PF06978.11	2.1e-36	1	2
ENSHBUP00000019429	POP1	PF06978.11	2.1e-36	2	2
ENSHBUP00000019429	POPLD	PF08170.12	7.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000028765	-	3075	XM_005930160	ENSHBUP00000019429	982 (aa)	XP_005930222	UPI0003BD672C

Gene Model

Click here to download ENSHBUG00000021583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000021583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000021583	pop1	100	47.781	ENSG00000104356	POP1	100	47.834	Homo_sapiens
ENSHBUG00000021583	pop1	100	80.967	ENSAPOG00000008198	pop1	100	80.967	Acanthochromis_polyacanthus
ENSHBUG00000021583	pop1	100	47.810	ENSAMEG00000000556	POP1	100	47.810	Ailuropoda_melanoleuca
ENSHBUG00000021583	pop1	100	83.198	ENSACIG00000004169	POP1	100	82.020	Amphilophus_citrinellus
ENSHBUG00000021583	pop1	100	80.645	ENSAOCG00000010991	pop1	100	80.746	Amphiprion_ocellaris
ENSHBUG00000021583	pop1	100	72.709	ENSAPEG00000007607	pop1	100	72.410	Amphiprion_percula
ENSHBUG00000021583	pop1	100	75.598	ENSATEG00000024814	POP1	100	75.924	Anabas_testudineus
ENSHBUG00000021583	pop1	93	49.016	ENSAPLG00000014418	POP1	99	48.960	Anas_platyrhynchos
ENSHBUG00000021583	pop1	100	45.666	ENSACAG00000016083	POP1	100	45.387	Anolis_carolinensis
ENSHBUG00000021583	pop1	87	56.034	ENSANAG00000026360	POP1	99	55.172	Aotus_nancymaae
ENSHBUG00000021583	pop1	100	99.084	ENSACLG00000010951	pop1	100	99.084	Astatotilapia_calliptera
ENSHBUG00000021583	pop1	100	57.833	ENSAMXG00000014483	POP1	100	57.859	Astyanax_mexicanus
ENSHBUG00000021583	pop1	100	48.531	ENSBTAG00000012596	POP1	100	48.482	Bos_taurus
ENSHBUG00000021583	pop1	75	31.496	WBGene00015486	C05D11.9	89	34.434	Caenorhabditis_elegans
ENSHBUG00000021583	pop1	100	47.228	ENSCJAG00000015567	POP1	100	47.424	Callithrix_jacchus
ENSHBUG00000021583	pop1	100	48.141	ENSCAFG00000000469	POP1	100	48.141	Canis_familiaris
ENSHBUG00000021583	pop1	100	47.137	ENSCAFG00020026765	POP1	100	47.137	Canis_lupus_dingo
ENSHBUG00000021583	pop1	95	52.846	ENSCHIG00000017066	POP1	100	47.448	Capra_hircus
ENSHBUG00000021583	pop1	100	47.502	ENSTSYG00000003097	POP1	100	47.686	Carlito_syrichta
ENSHBUG00000021583	pop1	100	46.792	ENSCAPG00000007251	POP1	100	46.692	Cavia_aperea
ENSHBUG00000021583	pop1	100	48.250	ENSCPOG00000002901	POP1	100	48.152	Cavia_porcellus
ENSHBUG00000021583	pop1	100	47.424	ENSCCAG00000018939	POP1	100	47.323	Cebus_capucinus
ENSHBUG00000021583	pop1	100	47.120	ENSCATG00000040916	POP1	100	47.081	Cercocebus_atys
ENSHBUG00000021583	pop1	100	48.421	ENSCLAG00000007208	POP1	97	48.384	Chinchilla_lanigera
ENSHBUG00000021583	pop1	91	49.315	ENSCSAG00000012340	POP1	98	49.095	Chlorocebus_sabaeus
ENSHBUG00000021583	pop1	95	46.957	ENSCHOG00000011432	POP1	98	46.957	Choloepus_hoffmanni
ENSHBUG00000021583	pop1	100	50.000	ENSCPBG00000006373	POP1	100	50.144	Chrysemys_picta_bellii
ENSHBUG00000021583	pop1	82	36.437	ENSCING00000008323	-	89	36.032	Ciona_intestinalis
ENSHBUG00000021583	pop1	100	46.931	ENSCANG00000001647	POP1	100	46.987	Colobus_angolensis_palliatus
ENSHBUG00000021583	pop1	100	47.464	ENSCGRG00001017308	Pop1	100	47.368	Cricetulus_griseus_chok1gshd
ENSHBUG00000021583	pop1	100	44.304	ENSCGRG00000010824	Pop1	100	44.315	Cricetulus_griseus_crigri
ENSHBUG00000021583	pop1	100	71.069	ENSCSEG00000008737	POP1	100	71.069	Cynoglossus_semilaevis
ENSHBUG00000021583	pop1	100	72.138	ENSCVAG00000022248	pop1	100	72.138	Cyprinodon_variegatus
ENSHBUG00000021583	pop1	53	54.457	ENSDARG00000102087	pop1	98	53.295	Danio_rerio
ENSHBUG00000021583	pop1	100	45.698	ENSDNOG00000019974	POP1	100	45.370	Dasypus_novemcinctus
ENSHBUG00000021583	pop1	100	42.545	ENSDORG00000015384	Pop1	100	42.776	Dipodomys_ordii
ENSHBUG00000021583	pop1	88	47.834	ENSETEG00000007839	POP1	88	47.834	Echinops_telfairi
ENSHBUG00000021583	pop1	100	47.714	ENSEASG00005003189	POP1	98	47.524	Equus_asinus_asinus
ENSHBUG00000021583	pop1	100	47.863	ENSECAG00000024236	POP1	100	47.768	Equus_caballus
ENSHBUG00000021583	pop1	51	75.325	ENSEEUG00000003050	-	53	80.303	Erinaceus_europaeus
ENSHBUG00000021583	pop1	100	63.078	ENSELUG00000003526	pop1	100	63.380	Esox_lucius
ENSHBUG00000021583	pop1	100	47.137	ENSFCAG00000002168	POP1	100	47.283	Felis_catus
ENSHBUG00000021583	pop1	100	47.587	ENSFALG00000005711	POP1	100	48.456	Ficedula_albicollis
ENSHBUG00000021583	pop1	100	46.869	ENSFDAG00000017068	POP1	100	47.059	Fukomys_damarensis
ENSHBUG00000021583	pop1	100	71.903	ENSFHEG00000019518	pop1	100	71.903	Fundulus_heteroclitus
ENSHBUG00000021583	pop1	100	62.475	ENSGMOG00000000659	POP1	100	61.771	Gadus_morhua
ENSHBUG00000021583	pop1	100	71.472	ENSGAFG00000019770	POP1	100	71.169	Gambusia_affinis
ENSHBUG00000021583	pop1	100	67.495	ENSGACG00000003499	pop1	100	67.495	Gasterosteus_aculeatus
ENSHBUG00000021583	pop1	100	49.094	ENSGAGG00000011737	POP1	98	49.520	Gopherus_agassizii
ENSHBUG00000021583	pop1	100	47.686	ENSGGOG00000003176	POP1	100	47.834	Gorilla_gorilla
ENSHBUG00000021583	pop1	100	48.057	ENSHGLG00000006029	POP1	100	48.201	Heterocephalus_glaber_female
ENSHBUG00000021583	pop1	100	48.057	ENSHGLG00100016879	POP1	100	48.201	Heterocephalus_glaber_male
ENSHBUG00000021583	pop1	100	64.637	ENSHCOG00000013888	pop1	95	67.358	Hippocampus_comes
ENSHBUG00000021583	pop1	99	55.696	ENSIPUG00000018336	pop1	100	55.447	Ictalurus_punctatus
ENSHBUG00000021583	pop1	100	47.042	ENSSTOG00000011455	POP1	97	47.180	Ictidomys_tridecemlineatus
ENSHBUG00000021583	pop1	100	46.848	ENSJJAG00000013325	Pop1	100	47.554	Jaculus_jaculus
ENSHBUG00000021583	pop1	100	74.338	ENSKMAG00000001346	POP1	100	74.338	Kryptolebias_marmoratus
ENSHBUG00000021583	pop1	100	65.524	ENSLBEG00000024457	POP1	100	65.222	Labrus_bergylta
ENSHBUG00000021583	pop1	92	51.596	ENSLACG00000012498	POP1	98	51.992	Latimeria_chalumnae
ENSHBUG00000021583	pop1	100	55.136	ENSLOCG00000009817	POP1	100	55.373	Lepisosteus_oculatus
ENSHBUG00000021583	pop1	100	48.190	ENSLAFG00000010770	POP1	100	48.381	Loxodonta_africana
ENSHBUG00000021583	pop1	100	46.748	ENSMFAG00000000347	POP1	100	46.992	Macaca_fascicularis
ENSHBUG00000021583	pop1	100	46.893	ENSMNEG00000036870	POP1	100	46.948	Macaca_nemestrina
ENSHBUG00000021583	pop1	100	46.843	ENSMLEG00000034986	POP1	100	47.086	Mandrillus_leucophaeus
ENSHBUG00000021583	pop1	100	76.305	ENSMAMG00000004040	pop1	100	75.703	Mastacembelus_armatus
ENSHBUG00000021583	pop1	100	99.287	ENSMZEG00005025448	pop1	100	99.287	Maylandia_zebra
ENSHBUG00000021583	pop1	100	46.747	ENSMGAG00000012167	POP1	100	46.741	Meleagris_gallopavo
ENSHBUG00000021583	pop1	100	47.464	ENSMAUG00000017537	Pop1	100	47.368	Mesocricetus_auratus
ENSHBUG00000021583	pop1	100	47.114	ENSMICG00000004361	POP1	100	47.299	Microcebus_murinus
ENSHBUG00000021583	pop1	100	47.137	ENSMOCG00000006356	Pop1	100	47.233	Microtus_ochrogaster
ENSHBUG00000021583	pop1	100	66.163	ENSMMOG00000018242	pop1	100	66.365	Mola_mola
ENSHBUG00000021583	pop1	100	45.943	ENSMODG00000006561	POP1	100	46.509	Monodelphis_domestica
ENSHBUG00000021583	pop1	100	75.709	ENSMALG00000012621	POP1	100	75.709	Monopterus_albus
ENSHBUG00000021583	pop1	100	46.540	MGP_CAROLIEiJ_G0019726	Pop1	100	46.730	Mus_caroli
ENSHBUG00000021583	pop1	100	47.104	ENSMUSG00000022325	Pop1	100	47.293	Mus_musculus
ENSHBUG00000021583	pop1	100	46.863	MGP_PahariEiJ_G0019735	Pop1	100	46.863	Mus_pahari
ENSHBUG00000021583	pop1	100	47.488	MGP_SPRETEiJ_G0020622	Pop1	100	47.678	Mus_spretus
ENSHBUG00000021583	pop1	100	47.905	ENSMPUG00000015250	POP1	100	47.905	Mustela_putorius_furo
ENSHBUG00000021583	pop1	100	45.810	ENSMLUG00000010204	POP1	100	45.706	Myotis_lucifugus
ENSHBUG00000021583	pop1	100	47.777	ENSNGAG00000001582	Pop1	100	47.962	Nannospalax_galili
ENSHBUG00000021583	pop1	100	87.398	ENSNBRG00000002356	pop1	100	87.398	Neolamprologus_brichardi
ENSHBUG00000021583	pop1	100	47.875	ENSNLEG00000002541	POP1	100	47.928	Nomascus_leucogenys
ENSHBUG00000021583	pop1	86	56.484	ENSMEUG00000003118	POP1	83	56.484	Notamacropus_eugenii
ENSHBUG00000021583	pop1	100	47.893	ENSOPRG00000007667	POP1	100	47.893	Ochotona_princeps
ENSHBUG00000021583	pop1	100	48.011	ENSODEG00000003984	POP1	100	48.155	Octodon_degus
ENSHBUG00000021583	pop1	100	97.352	ENSONIG00000016445	pop1	100	97.352	Oreochromis_niloticus
ENSHBUG00000021583	pop1	60	47.610	ENSOANG00000001278	-	94	47.505	Ornithorhynchus_anatinus
ENSHBUG00000021583	pop1	100	46.931	ENSOCUG00000017400	POP1	100	47.075	Oryctolagus_cuniculus
ENSHBUG00000021583	pop1	100	71.486	ENSORLG00000002839	pop1	100	71.486	Oryzias_latipes
ENSHBUG00000021583	pop1	91	68.831	ENSORLG00020022450	POP1	95	68.600	Oryzias_latipes_hni
ENSHBUG00000021583	pop1	100	71.862	ENSORLG00015012746	POP1	100	71.862	Oryzias_latipes_hsok
ENSHBUG00000021583	pop1	100	70.618	ENSOMEG00000006915	pop1	99	70.618	Oryzias_melastigma
ENSHBUG00000021583	pop1	100	46.904	ENSOGAG00000001466	POP1	100	47.493	Otolemur_garnettii
ENSHBUG00000021583	pop1	100	47.781	ENSPPAG00000018410	POP1	100	47.834	Pan_paniscus
ENSHBUG00000021583	pop1	100	47.020	ENSPPRG00000005002	POP1	100	46.970	Panthera_pardus
ENSHBUG00000021583	pop1	100	47.343	ENSPTIG00000016527	POP1	100	47.343	Panthera_tigris_altaica
ENSHBUG00000021583	pop1	100	47.875	ENSPTRG00000020458	POP1	100	47.928	Pan_troglodytes
ENSHBUG00000021583	pop1	100	46.937	ENSPANG00000009704	POP1	100	47.180	Papio_anubis
ENSHBUG00000021583	pop1	100	58.243	ENSPKIG00000016325	POP1	100	58.644	Paramormyrops_kingsleyae
ENSHBUG00000021583	pop1	100	48.322	ENSPSIG00000012343	POP1	100	48.757	Pelodiscus_sinensis
ENSHBUG00000021583	pop1	100	60.000	ENSPMGG00000022253	POP1	93	64.372	Periophthalmus_magnuspinnatus
ENSHBUG00000021583	pop1	99	46.805	ENSPEMG00000023633	Pop1	100	46.617	Peromyscus_maniculatus_bairdii
ENSHBUG00000021583	pop1	91	42.738	ENSPMAG00000003209	POP1	99	42.555	Petromyzon_marinus
ENSHBUG00000021583	pop1	100	45.979	ENSPCIG00000012216	POP1	100	45.763	Phascolarctos_cinereus
ENSHBUG00000021583	pop1	100	71.098	ENSPFOG00000012490	POP1	100	70.695	Poecilia_formosa
ENSHBUG00000021583	pop1	100	70.896	ENSPLAG00000004646	POP1	100	70.393	Poecilia_latipinna
ENSHBUG00000021583	pop1	100	71.414	ENSPMEG00000019592	POP1	100	71.010	Poecilia_mexicana
ENSHBUG00000021583	pop1	100	70.854	ENSPREG00000020951	POP1	100	70.683	Poecilia_reticulata
ENSHBUG00000021583	pop1	100	47.358	ENSPPYG00000018777	POP1	100	47.413	Pongo_abelii
ENSHBUG00000021583	pop1	100	45.024	ENSPCAG00000016662	POP1	100	44.929	Procavia_capensis
ENSHBUG00000021583	pop1	100	47.209	ENSPCOG00000019420	POP1	100	47.493	Propithecus_coquereli
ENSHBUG00000021583	pop1	100	46.958	ENSPVAG00000014468	POP1	100	47.154	Pteropus_vampyrus
ENSHBUG00000021583	pop1	100	90.326	ENSPNYG00000004476	pop1	100	90.326	Pundamilia_nyererei
ENSHBUG00000021583	pop1	100	55.415	ENSPNAG00000000265	pop1	100	55.350	Pygocentrus_nattereri
ENSHBUG00000021583	pop1	100	46.520	ENSRNOG00000005243	Pop1	100	46.711	Rattus_norvegicus
ENSHBUG00000021583	pop1	98	52.925	ENSRBIG00000007996	POP1	100	46.452	Rhinopithecus_bieti
ENSHBUG00000021583	pop1	98	52.925	ENSRROG00000012334	POP1	100	47.502	Rhinopithecus_roxellana
ENSHBUG00000021583	pop1	99	47.137	ENSSBOG00000020830	POP1	100	47.278	Saimiri_boliviensis_boliviensis
ENSHBUG00000021583	pop1	100	46.610	ENSSHAG00000000296	POP1	100	46.610	Sarcophilus_harrisii
ENSHBUG00000021583	pop1	100	59.719	ENSSFOG00015007429	pop1	99	59.419	Scleropages_formosus
ENSHBUG00000021583	pop1	100	71.805	ENSSMAG00000010467	POP1	100	71.530	Scophthalmus_maximus
ENSHBUG00000021583	pop1	100	78.471	ENSSDUG00000007817	POP1	100	79.255	Seriola_dumerili
ENSHBUG00000021583	pop1	100	79.032	ENSSLDG00000012565	POP1	100	79.859	Seriola_lalandi_dorsalis
ENSHBUG00000021583	pop1	100	45.480	ENSSPUG00000003550	-	100	45.576	Sphenodon_punctatus
ENSHBUG00000021583	pop1	100	74.129	ENSSPAG00000014955	pop1	100	74.129	Stegastes_partitus
ENSHBUG00000021583	pop1	100	47.776	ENSSSCG00000006078	POP1	100	47.776	Sus_scrofa
ENSHBUG00000021583	pop1	93	44.745	ENSTGUG00000012011	-	100	45.000	Taeniopygia_guttata
ENSHBUG00000021583	pop1	100	66.165	ENSTRUG00000010856	pop1	100	65.905	Takifugu_rubripes
ENSHBUG00000021583	pop1	95	68.834	ENSTNIG00000013297	pop1	100	68.834	Tetraodon_nigroviridis
ENSHBUG00000021583	pop1	95	46.552	ENSTBEG00000014214	POP1	98	46.552	Tupaia_belangeri
ENSHBUG00000021583	pop1	100	46.724	ENSTTRG00000016071	POP1	100	46.914	Tursiops_truncatus
ENSHBUG00000021583	pop1	99	47.605	ENSUAMG00000017309	POP1	100	47.507	Ursus_americanus
ENSHBUG00000021583	pop1	100	46.742	ENSUMAG00000016952	POP1	100	51.866	Ursus_maritimus
ENSHBUG00000021583	pop1	86	52.650	ENSVPAG00000008278	POP1	82	53.025	Vicugna_pacos
ENSHBUG00000021583	pop1	100	46.947	ENSVVUG00000010994	POP1	100	46.947	Vulpes_vulpes
ENSHBUG00000021583	pop1	100	62.365	ENSXCOG00000017043	POP1	100	61.243	Xiphophorus_couchianus
ENSHBUG00000021583	pop1	100	70.695	ENSXMAG00000002472	POP1	100	70.393	Xiphophorus_maculatus