EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000021921 (Gene tree)
Gene ID
102299939
Gene Symbol
MSI1
Alias
-
Full Name
RNA-binding protein Musashi homolog 1-like
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Plus strand
Length
24754 bases
Position
chrJH425346.1:2073846-2098599
Accession
102299939
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000019717RRM_1PF00076.222e-3312
ENSHBUP00000019717RRM_1PF00076.222e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000029139MSI1-2014414XM_005918625ENSHBUP00000019717351 (aa)XP_005918687UPI000329C0FA
Gene Model
Click here to download ENSHBUG00000021921's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000021921's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000021921MSI18530.526ENSHBUG00000012058rbm388330.208
ENSHBUG00000021921MSI110092.593ENSHBUG00000011841-10092.593
ENSHBUG00000021921MSI19770.438ENSHBUG00000020800msi2a10066.382
ENSHBUG00000021921MSI15446.561ENSHBUG00000002484hnrnpaba8238.516
ENSHBUG00000021921MSI15444.211ENSHBUG00000014556-8437.455
ENSHBUG00000021921MSI15041.243ENSHBUG00000005647hnrnpa1a5840.541
ENSHBUG00000021921MSI16230.693ENSHBUG00000023154-7930.693
ENSHBUG00000021921MSI15334.759ENSHBUG00000023868HNRNPA07234.921
ENSHBUG00000021921MSI15039.205ENSHBUG00000023867-9040.314
ENSHBUG00000021921MSI15340.642ENSHBUG00000019734hnrnpa35640.642
ENSHBUG00000021921MSI15744.000ENSHBUG00000011794hnrnpd7739.921
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000021921MSI110083.242ENSG00000135097MSI110083.242Homo_sapiens
ENSHBUG00000021921MSI110098.006ENSAPOG00000003191MSI110098.006Acanthochromis_polyacanthus
ENSHBUG00000021921MSI110092.877ENSAPOG00000023458-10092.877Acanthochromis_polyacanthus
ENSHBUG00000021921MSI19463.780ENSAMEG00000013302MSI18389.231Ailuropoda_melanoleuca
ENSHBUG00000021921MSI19388.073ENSACIG00000017754-7299.505Amphilophus_citrinellus
ENSHBUG00000021921MSI110098.006ENSAOCG00000003804MSI110098.006Amphiprion_ocellaris
ENSHBUG00000021921MSI19483.587ENSAOCG00000009031-9583.587Amphiprion_ocellaris
ENSHBUG00000021921MSI110098.006ENSAPEG00000003245MSI110098.006Amphiprion_percula
ENSHBUG00000021921MSI110092.877ENSAPEG00000006857-8492.877Amphiprion_percula
ENSHBUG00000021921MSI110089.859ENSATEG00000023779-10089.859Anabas_testudineus
ENSHBUG00000021921MSI110088.515ENSATEG00000017059MSI110088.515Anabas_testudineus
ENSHBUG00000021921MSI110084.254ENSACAG00000002762MSI110084.254Anolis_carolinensis
ENSHBUG00000021921MSI110083.242ENSANAG00000027151MSI110083.242Aotus_nancymaae
ENSHBUG00000021921MSI18283.333ENSANAG00000027901-8883.333Aotus_nancymaae
ENSHBUG00000021921MSI110092.593ENSACLG00000000117-10093.598Astatotilapia_calliptera
ENSHBUG00000021921MSI1100100.000ENSACLG00000011230MSI1100100.000Astatotilapia_calliptera
ENSHBUG00000021921MSI19489.969ENSAMXG00000038960msi17689.969Astyanax_mexicanus
ENSHBUG00000021921MSI110083.242ENSBTAG00000009800MSI110085.337Bos_taurus
ENSHBUG00000021921MSI110083.242ENSCJAG00000008578MSI110083.242Callithrix_jacchus
ENSHBUG00000021921MSI110082.967ENSCAFG00000010283MSI110082.967Canis_familiaris
ENSHBUG00000021921MSI19485.209ENSCAFG00020020585MSI110085.209Canis_lupus_dingo
ENSHBUG00000021921MSI110081.843ENSCHIG00000024304MSI110081.843Capra_hircus
ENSHBUG00000021921MSI19484.709ENSTSYG00000033949MSI19584.709Carlito_syrichta
ENSHBUG00000021921MSI19485.348ENSCAPG00000003919MSI17885.348Cavia_aperea
ENSHBUG00000021921MSI19485.380ENSCPOG00000012361MSI110085.380Cavia_porcellus
ENSHBUG00000021921MSI110083.242ENSCCAG00000035567MSI110083.242Cebus_capucinus
ENSHBUG00000021921MSI110083.242ENSCATG00000030019MSI110083.242Cercocebus_atys
ENSHBUG00000021921MSI19485.380ENSCLAG00000011329MSI110085.380Chinchilla_lanigera
ENSHBUG00000021921MSI17881.720ENSCSAG00000002265MSI19681.720Chlorocebus_sabaeus
ENSHBUG00000021921MSI110086.686ENSCPBG00000011349MSI110086.686Chrysemys_picta_bellii
ENSHBUG00000021921MSI19484.756ENSCANG00000040651MSI110084.756Colobus_angolensis_palliatus
ENSHBUG00000021921MSI110083.242ENSCGRG00001018883Msi110083.242Cricetulus_griseus_chok1gshd
ENSHBUG00000021921MSI19484.802ENSCGRG00000002191Msi17284.802Cricetulus_griseus_crigri
ENSHBUG00000021921MSI19483.841ENSCSEG00000011032MSI110083.841Cynoglossus_semilaevis
ENSHBUG00000021921MSI110097.436ENSCSEG00000005834-10097.436Cynoglossus_semilaevis
ENSHBUG00000021921MSI110090.883ENSCSEG00000008352-10090.883Cynoglossus_semilaevis
ENSHBUG00000021921MSI110092.877ENSCVAG00000009100MSI110092.877Cyprinodon_variegatus
ENSHBUG00000021921MSI15172.388ENSCVAG00000017430zgc:1107969472.388Cyprinodon_variegatus
ENSHBUG00000021921MSI17679.358ENSCVAG00000017463-8979.358Cyprinodon_variegatus
ENSHBUG00000021921MSI17990.741ENSDARG00000102015CABZ01037298.19890.741Danio_rerio
ENSHBUG00000021921MSI19485.397ENSDARG00000010710msi110092.991Danio_rerio
ENSHBUG00000021921MSI19481.646ENSDNOG00000005713MSI19181.646Dasypus_novemcinctus
ENSHBUG00000021921MSI19484.132ENSDORG00000005610Msi19484.132Dipodomys_ordii
ENSHBUG00000021921MSI19481.402ENSETEG00000004756MSI110081.402Echinops_telfairi
ENSHBUG00000021921MSI110083.242ENSEASG00005004736MSI110083.242Equus_asinus_asinus
ENSHBUG00000021921MSI110083.242ENSECAG00000017526MSI110083.242Equus_caballus
ENSHBUG00000021921MSI19486.533ENSELUG00000023219MSI19286.533Esox_lucius
ENSHBUG00000021921MSI19487.195ENSELUG00000023280-10086.890Esox_lucius
ENSHBUG00000021921MSI110083.242ENSFCAG00000011007MSI110083.242Felis_catus
ENSHBUG00000021921MSI19489.000ENSFALG00000007574MSI110089.000Ficedula_albicollis
ENSHBUG00000021921MSI19484.451ENSFDAG00000019586MSI110084.451Fukomys_damarensis
ENSHBUG00000021921MSI110093.162ENSFHEG00000022446MSI110093.162Fundulus_heteroclitus
ENSHBUG00000021921MSI110097.436ENSFHEG00000003560-10097.436Fundulus_heteroclitus
ENSHBUG00000021921MSI110090.313ENSGMOG00000001006MSI19990.028Gadus_morhua
ENSHBUG00000021921MSI110085.393ENSGMOG00000017838-10085.393Gadus_morhua
ENSHBUG00000021921MSI19489.695ENSGALG00000007227MSI19875.318Gallus_gallus
ENSHBUG00000021921MSI19496.657ENSGAFG00000021522MSI19496.657Gambusia_affinis
ENSHBUG00000021921MSI110070.621ENSGAFG00000005860-10070.621Gambusia_affinis
ENSHBUG00000021921MSI110087.328ENSGACG00000008674-10087.328Gasterosteus_aculeatus
ENSHBUG00000021921MSI110091.168ENSGACG00000012679MSI110091.168Gasterosteus_aculeatus
ENSHBUG00000021921MSI110086.402ENSGAGG00000016037MSI110086.402Gopherus_agassizii
ENSHBUG00000021921MSI19485.032ENSGGOG00000010328MSI110085.032Gorilla_gorilla
ENSHBUG00000021921MSI110082.967ENSHGLG00000012782MSI110082.967Heterocephalus_glaber_female
ENSHBUG00000021921MSI19484.451ENSHGLG00100016848MSI110084.451Heterocephalus_glaber_male
ENSHBUG00000021921MSI110087.606ENSHCOG00000012067-10087.606Hippocampus_comes
ENSHBUG00000021921MSI19094.921ENSHCOG00000012019MSI19594.921Hippocampus_comes
ENSHBUG00000021921MSI110088.604ENSIPUG00000001976msi110088.604Ictalurus_punctatus
ENSHBUG00000021921MSI19485.209ENSSTOG00000009799MSI110085.209Ictidomys_tridecemlineatus
ENSHBUG00000021921MSI110083.242ENSJJAG00000010463Msi110083.242Jaculus_jaculus
ENSHBUG00000021921MSI110070.604ENSJJAG00000010643-10070.442Jaculus_jaculus
ENSHBUG00000021921MSI110092.308ENSKMAG00000011251MSI110092.308Kryptolebias_marmoratus
ENSHBUG00000021921MSI19490.854ENSKMAG00000019877-10090.854Kryptolebias_marmoratus
ENSHBUG00000021921MSI110093.162ENSLBEG00000008789MSI110093.162Labrus_bergylta
ENSHBUG00000021921MSI110098.575ENSLBEG00000001375-10098.575Labrus_bergylta
ENSHBUG00000021921MSI19484.302ENSLACG00000018287MSI110084.302Latimeria_chalumnae
ENSHBUG00000021921MSI15276.786ENSLOCG00000008618zgc:1107967176.786Lepisosteus_oculatus
ENSHBUG00000021921MSI19075.831ENSLAFG00000009412MSI110075.831Loxodonta_africana
ENSHBUG00000021921MSI19485.380ENSMFAG00000001798MSI110085.380Macaca_fascicularis
ENSHBUG00000021921MSI19485.380ENSMMUG00000031527MSI19684.483Macaca_mulatta
ENSHBUG00000021921MSI110083.242ENSMNEG00000040034MSI110083.242Macaca_nemestrina
ENSHBUG00000021921MSI19484.756ENSMLEG00000003921MSI110084.756Mandrillus_leucophaeus
ENSHBUG00000021921MSI110097.151ENSMAMG00000018426-10097.151Mastacembelus_armatus
ENSHBUG00000021921MSI110091.738ENSMAMG00000002279MSI110091.738Mastacembelus_armatus
ENSHBUG00000021921MSI1100100.000ENSMZEG00005026892MSI1100100.000Maylandia_zebra
ENSHBUG00000021921MSI110092.593ENSMZEG00005000340-10092.593Maylandia_zebra
ENSHBUG00000021921MSI16393.491ENSMGAG00000016518-10093.491Meleagris_gallopavo
ENSHBUG00000021921MSI16988.017ENSMAUG00000016820Msi19988.017Mesocricetus_auratus
ENSHBUG00000021921MSI110083.242ENSMICG00000033181MSI110083.242Microcebus_murinus
ENSHBUG00000021921MSI110082.967ENSMOCG00000002286Msi110082.967Microtus_ochrogaster
ENSHBUG00000021921MSI110085.470ENSMMOG00000012265-10085.470Mola_mola
ENSHBUG00000021921MSI19481.763ENSMMOG00000010492MSI19681.763Mola_mola
ENSHBUG00000021921MSI19058.735ENSMODG00000003189-10058.735Monodelphis_domestica
ENSHBUG00000021921MSI110092.593ENSMALG00000017889MSI110092.593Monopterus_albus
ENSHBUG00000021921MSI19496.951ENSMALG00000001426-10096.951Monopterus_albus
ENSHBUG00000021921MSI110082.692MGP_CAROLIEiJ_G0027626Msi110082.692Mus_caroli
ENSHBUG00000021921MSI110082.692ENSMUSG00000054256Msi19987.346Mus_musculus
ENSHBUG00000021921MSI110084.986MGP_PahariEiJ_G0024206Msi110084.986Mus_pahari
ENSHBUG00000021921MSI110082.692MGP_SPRETEiJ_G0028624Msi110082.692Mus_spretus
ENSHBUG00000021921MSI19485.209ENSMPUG00000003168MSI110085.209Mustela_putorius_furo
ENSHBUG00000021921MSI19475.893ENSMLUG00000010313MSI110075.893Myotis_lucifugus
ENSHBUG00000021921MSI19484.802ENSNGAG00000014508Msi19184.802Nannospalax_galili
ENSHBUG00000021921MSI110092.593ENSNBRG00000000841-10092.593Neolamprologus_brichardi
ENSHBUG00000021921MSI18890.984ENSNBRG00000018012MSI19990.984Neolamprologus_brichardi
ENSHBUG00000021921MSI19075.305ENSNLEG00000015636MSI110075.305Nomascus_leucogenys
ENSHBUG00000021921MSI19466.159ENSMEUG00000015759MSI110066.159Notamacropus_eugenii
ENSHBUG00000021921MSI19077.460ENSOPRG00000016879MSI110077.460Ochotona_princeps
ENSHBUG00000021921MSI19484.756ENSODEG00000006328MSI110084.756Octodon_degus
ENSHBUG00000021921MSI110096.154ENSONIG00000019452-10096.154Oreochromis_niloticus
ENSHBUG00000021921MSI110092.593ENSONIG00000011182MSI110092.593Oreochromis_niloticus
ENSHBUG00000021921MSI19485.209ENSOCUG00000027716MSI110085.209Oryctolagus_cuniculus
ENSHBUG00000021921MSI110096.296ENSORLG00000029593MSI110096.296Oryzias_latipes
ENSHBUG00000021921MSI110092.593ENSORLG00000019978-10092.593Oryzias_latipes
ENSHBUG00000021921MSI110092.593ENSORLG00020001208-7192.593Oryzias_latipes_hni
ENSHBUG00000021921MSI110096.296ENSORLG00020008266MSI19692.442Oryzias_latipes_hni
ENSHBUG00000021921MSI110096.296ENSORLG00015003916MSI110096.296Oryzias_latipes_hsok
ENSHBUG00000021921MSI110092.593ENSORLG00015013672-7687.749Oryzias_latipes_hsok
ENSHBUG00000021921MSI110096.581ENSOMEG00000002272-10096.581Oryzias_melastigma
ENSHBUG00000021921MSI110092.877ENSOMEG00000017536MSI110092.877Oryzias_melastigma
ENSHBUG00000021921MSI19981.593ENSOGAG00000003847MSI19981.593Otolemur_garnettii
ENSHBUG00000021921MSI19481.818ENSOARG00000012097MSI110081.818Ovis_aries
ENSHBUG00000021921MSI19484.756ENSPPAG00000043073MSI110084.756Pan_paniscus
ENSHBUG00000021921MSI110083.242ENSPPRG00000000370MSI110083.242Panthera_pardus
ENSHBUG00000021921MSI19485.209ENSPTIG00000008913MSI110085.209Panthera_tigris_altaica
ENSHBUG00000021921MSI110083.242ENSPTRG00000005531MSI110083.242Pan_troglodytes
ENSHBUG00000021921MSI110082.967ENSPANG00000006335MSI110082.967Papio_anubis
ENSHBUG00000021921MSI110090.598ENSPKIG00000023575-10090.598Paramormyrops_kingsleyae
ENSHBUG00000021921MSI110093.732ENSPKIG00000016497MSI110093.732Paramormyrops_kingsleyae
ENSHBUG00000021921MSI19485.410ENSPSIG00000011608-9385.410Pelodiscus_sinensis
ENSHBUG00000021921MSI17981.223ENSPSIG00000009621-10081.223Pelodiscus_sinensis
ENSHBUG00000021921MSI19475.831ENSPMGG00000007743-9870.487Periophthalmus_magnuspinnatus
ENSHBUG00000021921MSI19087.658ENSPMGG00000000514MSI19787.658Periophthalmus_magnuspinnatus
ENSHBUG00000021921MSI19483.383ENSPEMG00000010491Msi19583.383Peromyscus_maniculatus_bairdii
ENSHBUG00000021921MSI110097.436ENSPFOG00000008319-8697.436Poecilia_formosa
ENSHBUG00000021921MSI110092.877ENSPFOG00000013113MSI110092.877Poecilia_formosa
ENSHBUG00000021921MSI110092.877ENSPLAG00000014025-10092.877Poecilia_latipinna
ENSHBUG00000021921MSI110097.436ENSPLAG00000012431-9797.436Poecilia_latipinna
ENSHBUG00000021921MSI110096.866ENSPMEG00000007025-8696.866Poecilia_mexicana
ENSHBUG00000021921MSI110092.877ENSPMEG00000012796MSI110092.877Poecilia_mexicana
ENSHBUG00000021921MSI17681.448ENSPREG00000014574-10081.448Poecilia_reticulata
ENSHBUG00000021921MSI19786.919ENSPREG00000021416-9886.919Poecilia_reticulata
ENSHBUG00000021921MSI110082.418ENSPPYG00000005027MSI110082.418Pongo_abelii
ENSHBUG00000021921MSI17689.340ENSPCAG00000002300MSI17289.340Procavia_capensis
ENSHBUG00000021921MSI110083.242ENSPCOG00000017341MSI110083.242Propithecus_coquereli
ENSHBUG00000021921MSI19468.598ENSPVAG00000002225MSI110068.598Pteropus_vampyrus
ENSHBUG00000021921MSI1100100.000ENSPNYG00000004379MSI1100100.000Pundamilia_nyererei
ENSHBUG00000021921MSI110092.593ENSPNYG00000002529-10092.593Pundamilia_nyererei
ENSHBUG00000021921MSI110089.174ENSPNAG00000019337msi110089.174Pygocentrus_nattereri
ENSHBUG00000021921MSI19484.887ENSRNOG00000001156Msi110084.887Rattus_norvegicus
ENSHBUG00000021921MSI19485.209ENSRBIG00000036889MSI110085.209Rhinopithecus_bieti
ENSHBUG00000021921MSI19484.545ENSRROG00000041076MSI19384.545Rhinopithecus_roxellana
ENSHBUG00000021921MSI19485.380ENSSBOG00000030259MSI19985.380Saimiri_boliviensis_boliviensis
ENSHBUG00000021921MSI19474.837ENSSHAG00000006834MSI110074.837Sarcophilus_harrisii
ENSHBUG00000021921MSI19495.441ENSSFOG00015014964-9595.441Scleropages_formosus
ENSHBUG00000021921MSI19492.749ENSSFOG00015005350MSI19692.749Scleropages_formosus
ENSHBUG00000021921MSI19487.975ENSSMAG00000018824MSI19787.975Scophthalmus_maximus
ENSHBUG00000021921MSI19496.565ENSSMAG00000009156-7396.059Scophthalmus_maximus
ENSHBUG00000021921MSI110092.877ENSSDUG00000001027MSI110092.877Seriola_dumerili
ENSHBUG00000021921MSI110098.860ENSSDUG00000022697-10098.860Seriola_dumerili
ENSHBUG00000021921MSI110083.242ENSSLDG00000018706-10083.242Seriola_lalandi_dorsalis
ENSHBUG00000021921MSI110092.877ENSSLDG00000016832MSI110092.877Seriola_lalandi_dorsalis
ENSHBUG00000021921MSI110086.402ENSSPUG00000015741MSI110086.402Sphenodon_punctatus
ENSHBUG00000021921MSI19498.780ENSSPAG00000013098-10098.780Stegastes_partitus
ENSHBUG00000021921MSI17674.882ENSSPAG00000014085-10074.882Stegastes_partitus
ENSHBUG00000021921MSI15480.247ENSSPAG00000015573zgc:1107968280.247Stegastes_partitus
ENSHBUG00000021921MSI110082.967ENSSSCG00000029365MSI110084.887Sus_scrofa
ENSHBUG00000021921MSI19486.471ENSTGUG00000009534MSI110086.471Taeniopygia_guttata
ENSHBUG00000021921MSI19484.810ENSTRUG00000015636-7984.810Takifugu_rubripes
ENSHBUG00000021921MSI18091.667ENSTRUG00000016249MSI110081.890Takifugu_rubripes
ENSHBUG00000021921MSI15081.818ENSTRUG00000021586-9981.818Takifugu_rubripes
ENSHBUG00000021921MSI110087.288ENSTNIG00000011469MSI110087.288Tetraodon_nigroviridis
ENSHBUG00000021921MSI19665.689ENSTNIG00000019814-9765.689Tetraodon_nigroviridis
ENSHBUG00000021921MSI19476.190ENSTBEG00000007182MSI110075.824Tupaia_belangeri
ENSHBUG00000021921MSI17687.970ENSTTRG00000005663MSI17887.970Tursiops_truncatus
ENSHBUG00000021921MSI17087.037ENSUAMG00000015514MSI19487.037Ursus_americanus
ENSHBUG00000021921MSI19482.085ENSUMAG00000006176MSI18882.085Ursus_maritimus
ENSHBUG00000021921MSI19484.802ENSVVUG00000020993MSI110084.084Vulpes_vulpes
ENSHBUG00000021921MSI110082.621ENSXETG00000012216msi110083.191Xenopus_tropicalis
ENSHBUG00000021921MSI19479.027ENSXCOG00000017605MSI18979.027Xiphophorus_couchianus
ENSHBUG00000021921MSI110092.877ENSXMAG00000027103MSI110080.726Xiphophorus_maculatus
ENSHBUG00000021921MSI110097.151ENSXMAG00000018237-10097.151Xiphophorus_maculatus

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