EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000021933 (Gene tree)
Gene ID: 102313290
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 13329 bases
Position: chrJH425322.1:1809027-1822355
Accession: 102313290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000019732	zf-RanBP	PF00641.18	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000035626	-	3967	XM_014333623	ENSHBUP00000019732	711 (aa)	XP_014189109	UPI0006C99FFB

Gene Model

Click here to download ENSHBUG00000021933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000021933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000021933	shrprbck1r	76	44.074	ENSHBUG00000008208	rbck1	98	44.630

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000021933	shrprbck1r	100	84.798	ENSAPOG00000022737	shrprbck1r	100	84.798	Acanthochromis_polyacanthus
ENSHBUG00000021933	shrprbck1r	60	58.716	ENSAPOG00000023352	sharpin	95	58.716	Acanthochromis_polyacanthus
ENSHBUG00000021933	shrprbck1r	100	91.139	ENSACIG00000002184	shrprbck1r	100	91.139	Amphilophus_citrinellus
ENSHBUG00000021933	shrprbck1r	60	58.621	ENSAOCG00000017464	sharpin	95	58.621	Amphiprion_ocellaris
ENSHBUG00000021933	shrprbck1r	100	86.415	ENSAOCG00000002890	shrprbck1r	100	86.415	Amphiprion_ocellaris
ENSHBUG00000021933	shrprbck1r	100	84.497	ENSAPEG00000023274	shrprbck1r	100	84.497	Amphiprion_percula
ENSHBUG00000021933	shrprbck1r	60	58.621	ENSAPEG00000004049	sharpin	95	58.621	Amphiprion_percula
ENSHBUG00000021933	shrprbck1r	60	57.773	ENSATEG00000007832	sharpin	88	57.773	Anabas_testudineus
ENSHBUG00000021933	shrprbck1r	100	82.278	ENSATEG00000014561	shrprbck1r	100	82.278	Anabas_testudineus
ENSHBUG00000021933	shrprbck1r	100	99.437	ENSACLG00000022609	shrprbck1r	100	99.437	Astatotilapia_calliptera
ENSHBUG00000021933	shrprbck1r	100	70.556	ENSAMXG00000021016	shrprbck1r	100	70.959	Astyanax_mexicanus
ENSHBUG00000021933	shrprbck1r	55	57.692	ENSAMXG00000006229	sharpin	97	57.179	Astyanax_mexicanus
ENSHBUG00000021933	shrprbck1r	100	75.661	ENSCSEG00000011306	shrprbck1r	100	75.661	Cynoglossus_semilaevis
ENSHBUG00000021933	shrprbck1r	59	55.607	ENSCVAG00000006586	sharpin	95	55.607	Cyprinodon_variegatus
ENSHBUG00000021933	shrprbck1r	100	80.365	ENSCVAG00000007250	shrprbck1r	100	80.169	Cyprinodon_variegatus
ENSHBUG00000021933	shrprbck1r	55	56.555	ENSDARG00000076995	sharpin	94	55.784	Danio_rerio
ENSHBUG00000021933	shrprbck1r	100	70.539	ENSDARG00000059871	shrprbck1r	100	70.954	Danio_rerio
ENSHBUG00000021933	shrprbck1r	100	75.279	ENSELUG00000016022	shrprbck1r	100	75.279	Esox_lucius
ENSHBUG00000021933	shrprbck1r	59	55.684	ENSFHEG00000013564	sharpin	94	55.916	Fundulus_heteroclitus
ENSHBUG00000021933	shrprbck1r	51	60.542	ENSGMOG00000010123	sharpin	91	60.542	Gadus_morhua
ENSHBUG00000021933	shrprbck1r	100	78.682	ENSGAFG00000009309	shrprbck1r	100	78.481	Gambusia_affinis
ENSHBUG00000021933	shrprbck1r	59	44.471	ENSGAFG00000021405	sharpin	95	44.471	Gambusia_affinis
ENSHBUG00000021933	shrprbck1r	75	79.323	ENSGACG00000002544	shrprbck1r	100	79.323	Gasterosteus_aculeatus
ENSHBUG00000021933	shrprbck1r	62	52.018	ENSHCOG00000018847	sharpin	84	52.466	Hippocampus_comes
ENSHBUG00000021933	shrprbck1r	50	72.973	ENSIPUG00000011951	sharpin	96	72.973	Ictalurus_punctatus
ENSHBUG00000021933	shrprbck1r	96	68.097	ENSIPUG00000014247	shrprbck1r	98	66.621	Ictalurus_punctatus
ENSHBUG00000021933	shrprbck1r	100	78.562	ENSKMAG00000015215	shrprbck1r	100	78.641	Kryptolebias_marmoratus
ENSHBUG00000021933	shrprbck1r	60	57.209	ENSKMAG00000015204	sharpin	76	56.512	Kryptolebias_marmoratus
ENSHBUG00000021933	shrprbck1r	100	84.388	ENSLBEG00000016876	shrprbck1r	100	84.388	Labrus_bergylta
ENSHBUG00000021933	shrprbck1r	60	58.770	ENSLBEG00000016624	sharpin	96	58.770	Labrus_bergylta
ENSHBUG00000021933	shrprbck1r	95	53.061	ENSLACG00000010948	-	97	53.061	Latimeria_chalumnae
ENSHBUG00000021933	shrprbck1r	100	69.464	ENSLOCG00000008910	shrprbck1r	100	70.014	Lepisosteus_oculatus
ENSHBUG00000021933	shrprbck1r	100	81.857	ENSMAMG00000022930	shrprbck1r	100	81.857	Mastacembelus_armatus
ENSHBUG00000021933	shrprbck1r	60	43.959	ENSMAMG00000014645	sharpin	99	43.959	Mastacembelus_armatus
ENSHBUG00000021933	shrprbck1r	100	99.297	ENSMZEG00005021257	shrprbck1r	100	99.297	Maylandia_zebra
ENSHBUG00000021933	shrprbck1r	56	49.200	ENSMMOG00000016788	sharpin	83	72.414	Mola_mola
ENSHBUG00000021933	shrprbck1r	100	78.103	ENSMMOG00000003764	shrprbck1r	100	78.103	Mola_mola
ENSHBUG00000021933	shrprbck1r	57	45.070	ENSMALG00000020528	sharpin	96	45.070	Monopterus_albus
ENSHBUG00000021933	shrprbck1r	95	82.769	ENSMALG00000008861	shrprbck1r	95	82.769	Monopterus_albus
ENSHBUG00000021933	shrprbck1r	100	98.875	ENSNBRG00000002270	shrprbck1r	100	98.875	Neolamprologus_brichardi
ENSHBUG00000021933	shrprbck1r	100	97.609	ENSONIG00000014401	shrprbck1r	100	97.609	Oreochromis_niloticus
ENSHBUG00000021933	shrprbck1r	55	55.610	ENSONIG00000009626	-	97	54.878	Oreochromis_niloticus
ENSHBUG00000021933	shrprbck1r	60	56.177	ENSORLG00000017281	sharpin	95	56.177	Oryzias_latipes
ENSHBUG00000021933	shrprbck1r	100	79.243	ENSORLG00000007392	shrprbck1r	100	79.044	Oryzias_latipes
ENSHBUG00000021933	shrprbck1r	60	56.148	ENSORLG00020000801	sharpin	95	56.148	Oryzias_latipes_hni
ENSHBUG00000021933	shrprbck1r	100	78.682	ENSORLG00020018619	shrprbck1r	100	78.481	Oryzias_latipes_hni
ENSHBUG00000021933	shrprbck1r	60	56.381	ENSORLG00015009860	sharpin	95	56.381	Oryzias_latipes_hsok
ENSHBUG00000021933	shrprbck1r	100	78.682	ENSORLG00015018865	shrprbck1r	100	78.622	Oryzias_latipes_hsok
ENSHBUG00000021933	shrprbck1r	100	80.365	ENSOMEG00000012749	shrprbck1r	100	80.169	Oryzias_melastigma
ENSHBUG00000021933	shrprbck1r	59	43.632	ENSOMEG00000005729	sharpin	89	48.955	Oryzias_melastigma
ENSHBUG00000021933	shrprbck1r	65	60.254	ENSPKIG00000018308	-	96	59.831	Paramormyrops_kingsleyae
ENSHBUG00000021933	shrprbck1r	100	73.120	ENSPKIG00000006933	shrprbck1r	100	73.398	Paramormyrops_kingsleyae
ENSHBUG00000021933	shrprbck1r	100	75.983	ENSPMGG00000013254	shrprbck1r	100	75.843	Periophthalmus_magnuspinnatus
ENSHBUG00000021933	shrprbck1r	100	79.325	ENSPFOG00000004214	shrprbck1r	100	79.184	Poecilia_formosa
ENSHBUG00000021933	shrprbck1r	59	56.250	ENSPFOG00000015253	sharpin	95	56.250	Poecilia_formosa
ENSHBUG00000021933	shrprbck1r	59	56.481	ENSPLAG00000000423	sharpin	95	56.481	Poecilia_latipinna
ENSHBUG00000021933	shrprbck1r	100	79.184	ENSPLAG00000020523	shrprbck1r	100	79.044	Poecilia_latipinna
ENSHBUG00000021933	shrprbck1r	52	50.000	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSHBUG00000021933	shrprbck1r	100	77.918	ENSPMEG00000006877	shrprbck1r	100	77.778	Poecilia_mexicana
ENSHBUG00000021933	shrprbck1r	100	77.075	ENSPREG00000014689	shrprbck1r	100	76.934	Poecilia_reticulata
ENSHBUG00000021933	shrprbck1r	59	56.148	ENSPREG00000009702	sharpin	95	56.148	Poecilia_reticulata
ENSHBUG00000021933	shrprbck1r	100	99.578	ENSPNYG00000022601	shrprbck1r	100	99.578	Pundamilia_nyererei
ENSHBUG00000021933	shrprbck1r	100	69.262	ENSPNAG00000007847	shrprbck1r	100	69.672	Pygocentrus_nattereri
ENSHBUG00000021933	shrprbck1r	55	56.266	ENSPNAG00000002911	sharpin	99	55.867	Pygocentrus_nattereri
ENSHBUG00000021933	shrprbck1r	63	55.193	ENSSFOG00015004028	sharpin	99	55.000	Scleropages_formosus
ENSHBUG00000021933	shrprbck1r	75	63.178	ENSSFOG00015014150	-	96	62.056	Scleropages_formosus
ENSHBUG00000021933	shrprbck1r	100	80.471	ENSSMAG00000018085	shrprbck1r	100	80.471	Scophthalmus_maximus
ENSHBUG00000021933	shrprbck1r	60	45.688	ENSSDUG00000019039	sharpin	96	45.688	Seriola_dumerili
ENSHBUG00000021933	shrprbck1r	100	85.935	ENSSDUG00000002959	shrprbck1r	100	85.935	Seriola_dumerili
ENSHBUG00000021933	shrprbck1r	100	85.232	ENSSLDG00000009026	shrprbck1r	100	85.232	Seriola_lalandi_dorsalis
ENSHBUG00000021933	shrprbck1r	96	82.779	ENSSPAG00000016097	shrprbck1r	99	82.779	Stegastes_partitus
ENSHBUG00000021933	shrprbck1r	60	53.147	ENSTRUG00000011046	sharpin	96	52.414	Takifugu_rubripes
ENSHBUG00000021933	shrprbck1r	100	79.213	ENSTRUG00000006949	shrprbck1r	100	79.213	Takifugu_rubripes
ENSHBUG00000021933	shrprbck1r	55	56.965	ENSTNIG00000008521	sharpin	94	56.965	Tetraodon_nigroviridis
ENSHBUG00000021933	shrprbck1r	100	76.545	ENSXCOG00000006701	shrprbck1r	100	76.404	Xiphophorus_couchianus
ENSHBUG00000021933	shrprbck1r	100	76.404	ENSXMAG00000018972	shrprbck1r	100	76.264	Xiphophorus_maculatus
ENSHBUG00000021933	shrprbck1r	59	56.582	ENSXMAG00000022076	sharpin	95	56.582	Xiphophorus_maculatus