EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000022250 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:dkey-191l12.1
Full Name: R3H and coiled-coil domain-containing protein 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4627 bases
Position: chrJH425346.1:1934204-1938830
Accession: 102295420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000019999	R3H	PF01424.22	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000029531	-	1008	-	ENSHBUP00000019999	335 (aa)	-	-
ENSHBUT00000029510	-	1364	XM_005918606	ENSHBUP00000020011	337 (aa)	XP_005918668	-

Gene Model

Click here to download ENSHBUG00000022250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000022250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000022250	-	63	49.398	ENSG00000104679	R3HCC1	100	44.186	Homo_sapiens
ENSHBUG00000022250	-	83	66.234	ENSAPOG00000003616	r3hcc1	76	66.234	Acanthochromis_polyacanthus
ENSHBUG00000022250	-	90	89.888	ENSACIG00000017144	r3hcc1	76	89.888	Amphilophus_citrinellus
ENSHBUG00000022250	-	87	69.333	ENSAOCG00000003945	r3hcc1	78	63.319	Amphiprion_ocellaris
ENSHBUG00000022250	-	87	69.333	ENSAPEG00000003613	r3hcc1	78	63.319	Amphiprion_percula
ENSHBUG00000022250	-	90	64.679	ENSATEG00000023860	r3hcc1	77	64.530	Anabas_testudineus
ENSHBUG00000022250	-	78	50.000	ENSACAG00000016627	R3HCC1	60	50.000	Anolis_carolinensis
ENSHBUG00000022250	-	98	33.077	ENSANAG00000036169	R3HCC1	96	35.233	Aotus_nancymaae
ENSHBUG00000022250	-	63	49.398	ENSCJAG00000020118	R3HCC1	54	49.398	Callithrix_jacchus
ENSHBUG00000022250	-	74	46.465	ENSCPOG00000009696	R3HCC1	53	46.465	Cavia_porcellus
ENSHBUG00000022250	-	98	32.812	ENSCCAG00000037811	R3HCC1	96	34.456	Cebus_capucinus
ENSHBUG00000022250	-	63	49.398	ENSCATG00000032971	R3HCC1	56	49.398	Cercocebus_atys
ENSHBUG00000022250	-	63	49.398	ENSCANG00000029441	R3HCC1	96	35.733	Colobus_angolensis_palliatus
ENSHBUG00000022250	-	98	57.308	ENSCSEG00000005748	r3hcc1	80	58.559	Cynoglossus_semilaevis
ENSHBUG00000022250	-	81	58.065	ENSCVAG00000002640	r3hcc1	70	58.065	Cyprinodon_variegatus
ENSHBUG00000022250	-	99	42.782	ENSDARG00000099593	r3hcc1	62	59.355	Danio_rerio
ENSHBUG00000022250	-	63	48.810	ENSDNOG00000007168	R3HCC1	57	48.810	Dasypus_novemcinctus
ENSHBUG00000022250	-	64	68.421	ENSELUG00000023650	r3hcc1	62	64.286	Esox_lucius
ENSHBUG00000022250	-	79	48.810	ENSFCAG00000012395	R3HCC1	59	48.810	Felis_catus
ENSHBUG00000022250	-	69	50.602	ENSFDAG00000001572	R3HCC1	61	50.602	Fukomys_damarensis
ENSHBUG00000022250	-	95	42.073	ENSGMOG00000017590	-	98	42.073	Gadus_morhua
ENSHBUG00000022250	-	88	85.542	ENSGAFG00000008747	-	66	89.362	Gambusia_affinis
ENSHBUG00000022250	-	85	75.000	ENSGACG00000008447	r3hcc1	68	75.000	Gasterosteus_aculeatus
ENSHBUG00000022250	-	63	49.398	ENSGGOG00000013817	R3HCC1	62	46.970	Gorilla_gorilla
ENSHBUG00000022250	-	70	46.316	ENSHGLG00000010517	R3HCC1	50	46.316	Heterocephalus_glaber_female
ENSHBUG00000022250	-	70	46.316	ENSHGLG00100006388	R3HCC1	50	46.316	Heterocephalus_glaber_male
ENSHBUG00000022250	-	76	78.161	ENSHCOG00000011745	r3hcc1	58	78.161	Hippocampus_comes
ENSHBUG00000022250	-	76	67.470	ENSIPUG00000024504	r3hcc1	61	66.667	Ictalurus_punctatus
ENSHBUG00000022250	-	79	80.328	ENSKMAG00000000286	r3hcc1	72	80.328	Kryptolebias_marmoratus
ENSHBUG00000022250	-	64	51.190	ENSLACG00000011894	R3HCC1	51	51.190	Latimeria_chalumnae
ENSHBUG00000022250	-	98	48.729	ENSLOCG00000015442	r3hcc1	71	61.176	Lepisosteus_oculatus
ENSHBUG00000022250	-	63	49.398	ENSMFAG00000032894	R3HCC1	56	49.398	Macaca_fascicularis
ENSHBUG00000022250	-	63	49.398	ENSMMUG00000016655	R3HCC1	54	49.398	Macaca_mulatta
ENSHBUG00000022250	-	98	31.726	ENSMNEG00000043283	R3HCC1	56	49.398	Macaca_nemestrina
ENSHBUG00000022250	-	63	49.398	ENSMLEG00000030147	R3HCC1	56	49.398	Mandrillus_leucophaeus
ENSHBUG00000022250	-	92	68.778	ENSMAMG00000018146	r3hcc1	73	68.778	Mastacembelus_armatus
ENSHBUG00000022250	-	63	49.624	ENSMICG00000011146	R3HCC1	54	49.624	Microcebus_murinus
ENSHBUG00000022250	-	78	77.049	ENSMALG00000000731	r3hcc1	70	77.049	Monopterus_albus
ENSHBUG00000022250	-	81	69.108	ENSNBRG00000016975	-	83	69.108	Neolamprologus_brichardi
ENSHBUG00000022250	-	65	47.482	ENSMEUG00000010587	R3HCC1	52	47.482	Notamacropus_eugenii
ENSHBUG00000022250	-	67	46.988	ENSOPRG00000013390	R3HCC1	51	46.988	Ochotona_princeps
ENSHBUG00000022250	-	79	73.770	ENSORLG00000016816	r3hcc1	72	73.770	Oryzias_latipes
ENSHBUG00000022250	-	79	73.770	ENSORLG00020012005	r3hcc1	72	73.770	Oryzias_latipes_hni
ENSHBUG00000022250	-	79	73.770	ENSORLG00015007018	r3hcc1	72	73.770	Oryzias_latipes_hsok
ENSHBUG00000022250	-	75	78.723	ENSOMEG00000000816	r3hcc1	71	78.723	Oryzias_melastigma
ENSHBUG00000022250	-	63	49.398	ENSPPAG00000033165	R3HCC1	53	49.398	Pan_paniscus
ENSHBUG00000022250	-	98	34.908	ENSPPRG00000002522	R3HCC1	96	34.908	Panthera_pardus
ENSHBUG00000022250	-	68	59.574	ENSPTIG00000011230	R3HCC1	88	34.393	Panthera_tigris_altaica
ENSHBUG00000022250	-	63	49.398	ENSPTRG00000020076	R3HCC1	53	49.398	Pan_troglodytes
ENSHBUG00000022250	-	63	49.398	ENSPANG00000000453	R3HCC1	56	49.398	Papio_anubis
ENSHBUG00000022250	-	66	63.333	ENSPKIG00000014426	-	58	63.576	Paramormyrops_kingsleyae
ENSHBUG00000022250	-	70	63.333	ENSPKIG00000020397	-	54	63.576	Paramormyrops_kingsleyae
ENSHBUG00000022250	-	67	62.651	ENSPMGG00000007792	r3hcc1	55	62.651	Periophthalmus_magnuspinnatus
ENSHBUG00000022250	-	88	84.337	ENSPFOG00000022301	r3hcc1	67	84.337	Poecilia_formosa
ENSHBUG00000022250	-	88	84.337	ENSPLAG00000010794	r3hcc1	67	84.337	Poecilia_latipinna
ENSHBUG00000022250	-	88	84.337	ENSPMEG00000022515	r3hcc1	67	84.337	Poecilia_mexicana
ENSHBUG00000022250	-	88	84.337	ENSPREG00000000713	r3hcc1	67	84.337	Poecilia_reticulata
ENSHBUG00000022250	-	90	49.398	ENSPCOG00000027554	R3HCC1	54	49.398	Propithecus_coquereli
ENSHBUG00000022250	-	68	50.000	ENSPVAG00000009829	R3HCC1	51	50.000	Pteropus_vampyrus
ENSHBUG00000022250	-	73	62.025	ENSPNAG00000023875	r3hcc1	61	67.647	Pygocentrus_nattereri
ENSHBUG00000022250	-	63	49.398	ENSRBIG00000028045	R3HCC1	56	49.398	Rhinopithecus_bieti
ENSHBUG00000022250	-	63	49.398	ENSRROG00000031126	R3HCC1	56	49.398	Rhinopithecus_roxellana
ENSHBUG00000022250	-	98	31.646	ENSSBOG00000022590	R3HCC1	54	49.398	Saimiri_boliviensis_boliviensis
ENSHBUG00000022250	-	63	49.398	ENSSHAG00000016526	-	50	48.810	Sarcophilus_harrisii
ENSHBUG00000022250	-	86	62.712	ENSSFOG00015013507	r3hcc1	100	42.382	Scleropages_formosus
ENSHBUG00000022250	-	93	66.234	ENSSMAG00000008647	r3hcc1	75	66.234	Scophthalmus_maximus
ENSHBUG00000022250	-	100	71.429	ENSSDUG00000022786	r3hcc1	76	71.429	Seriola_dumerili
ENSHBUG00000022250	-	100	71.861	ENSSLDG00000019031	r3hcc1	76	71.861	Seriola_lalandi_dorsalis
ENSHBUG00000022250	-	98	62.705	ENSSPAG00000013497	r3hcc1	81	61.728	Stegastes_partitus
ENSHBUG00000022250	-	97	49.737	ENSTRUG00000015880	r3hcc1	57	73.103	Takifugu_rubripes
ENSHBUG00000022250	-	82	65.079	ENSXCOG00000017626	r3hcc1	66	65.079	Xiphophorus_couchianus
ENSHBUG00000022250	-	88	83.133	ENSXMAG00000018375	r3hcc1	66	89.362	Xiphophorus_maculatus