EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000022379 (Gene tree)
Gene ID: 102298853
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 22655 bases
Position: chrJH425401.1:2027417-2050071
Accession: 102298853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000034624	B3_4	PF03483.17	1.3e-27	1	1
ENSHBUP00000020066	B3_4	PF03483.17	2.6e-27	1	1
ENSHBUP00000034624	B5	PF03484.15	2.1e-15	1	1
ENSHBUP00000020066	B5	PF03484.15	4.7e-15	1	1
ENSHBUP00000020066	EF1_GNE	PF00736.19	7.9e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000029571	-	1719	-	ENSHBUP00000034624	572 (aa)	-	-
ENSHBUT00000029590	-	2849	XM_005926640	ENSHBUP00000020066	848 (aa)	XP_005926702	UPI0003BD7B3E

Gene Model

Click here to download ENSHBUG00000022379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000022379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000022379	farsb	100	74.746	ENSG00000116120	FARSB	100	76.441	Homo_sapiens
ENSHBUG00000022379	farsb	100	90.802	ENSAPOG00000013072	farsb	100	90.802	Acanthochromis_polyacanthus
ENSHBUG00000022379	farsb	100	74.915	ENSAMEG00000005984	FARSB	100	76.610	Ailuropoda_melanoleuca
ENSHBUG00000022379	farsb	100	92.670	ENSACIG00000021623	farsb	100	92.670	Amphilophus_citrinellus
ENSHBUG00000022379	farsb	100	91.449	ENSAOCG00000004912	farsb	100	91.449	Amphiprion_ocellaris
ENSHBUG00000022379	farsb	100	90.566	ENSAPEG00000001153	farsb	100	90.566	Amphiprion_percula
ENSHBUG00000022379	farsb	100	89.304	ENSATEG00000021441	farsb	100	88.915	Anabas_testudineus
ENSHBUG00000022379	farsb	99	73.928	ENSAPLG00000010292	FARSB	99	75.986	Anas_platyrhynchos
ENSHBUG00000022379	farsb	100	75.042	ENSACAG00000004769	FARSB	98	76.740	Anolis_carolinensis
ENSHBUG00000022379	farsb	100	74.407	ENSANAG00000024637	FARSB	100	76.102	Aotus_nancymaae
ENSHBUG00000022379	farsb	100	99.528	ENSACLG00000013951	farsb	100	99.528	Astatotilapia_calliptera
ENSHBUG00000022379	farsb	84	79.435	ENSAMXG00000033881	farsb	100	81.764	Astyanax_mexicanus
ENSHBUG00000022379	farsb	96	73.805	ENSBTAG00000045523	-	100	75.575	Bos_taurus
ENSHBUG00000022379	farsb	100	74.915	ENSBTAG00000011649	FARSB	100	76.610	Bos_taurus
ENSHBUG00000022379	farsb	100	58.108	WBGene00001498	fars-3	100	59.291	Caenorhabditis_elegans
ENSHBUG00000022379	farsb	100	74.746	ENSCJAG00000012181	FARSB	100	76.441	Callithrix_jacchus
ENSHBUG00000022379	farsb	100	75.424	ENSCAFG00000016094	-	100	77.119	Canis_familiaris
ENSHBUG00000022379	farsb	100	73.711	ENSCAFG00020026684	FARSB	100	76.596	Canis_lupus_dingo
ENSHBUG00000022379	farsb	100	75.254	ENSCHIG00000014275	FARSB	100	76.949	Capra_hircus
ENSHBUG00000022379	farsb	100	74.237	ENSTSYG00000008461	FARSB	100	75.763	Carlito_syrichta
ENSHBUG00000022379	farsb	95	68.827	ENSCAPG00000016436	FARSB	99	69.739	Cavia_aperea
ENSHBUG00000022379	farsb	100	74.576	ENSCPOG00000013109	FARSB	100	75.932	Cavia_porcellus
ENSHBUG00000022379	farsb	100	70.339	ENSCCAG00000025840	FARSB	100	72.034	Cebus_capucinus
ENSHBUG00000022379	farsb	100	74.746	ENSCATG00000036168	FARSB	100	76.441	Cercocebus_atys
ENSHBUG00000022379	farsb	100	75.085	ENSCLAG00000011954	FARSB	100	76.780	Chinchilla_lanigera
ENSHBUG00000022379	farsb	100	74.746	ENSCSAG00000007806	FARSB	100	76.441	Chlorocebus_sabaeus
ENSHBUG00000022379	farsb	80	87.500	ENSCHOG00000011785	FARSB	81	87.500	Choloepus_hoffmanni
ENSHBUG00000022379	farsb	100	75.042	ENSCPBG00000019346	FARSB	98	77.250	Chrysemys_picta_bellii
ENSHBUG00000022379	farsb	99	59.966	ENSCING00000004180	-	99	60.637	Ciona_intestinalis
ENSHBUG00000022379	farsb	99	61.037	ENSCSAVG00000005346	-	99	61.873	Ciona_savignyi
ENSHBUG00000022379	farsb	97	74.386	ENSCANG00000036239	FARSB	100	76.140	Colobus_angolensis_palliatus
ENSHBUG00000022379	farsb	100	75.254	ENSCGRG00001022928	Farsb	100	76.949	Cricetulus_griseus_chok1gshd
ENSHBUG00000022379	farsb	100	75.254	ENSCGRG00000001513	Farsb	100	76.949	Cricetulus_griseus_crigri
ENSHBUG00000022379	farsb	100	88.964	ENSCSEG00000005415	farsb	99	91.354	Cynoglossus_semilaevis
ENSHBUG00000022379	farsb	76	84.444	ENSCVAG00000018815	farsb	98	87.556	Cyprinodon_variegatus
ENSHBUG00000022379	farsb	100	81.525	ENSDARG00000016864	farsb	100	84.068	Danio_rerio
ENSHBUG00000022379	farsb	100	73.729	ENSDNOG00000002511	FARSB	100	75.085	Dasypus_novemcinctus
ENSHBUG00000022379	farsb	100	75.085	ENSDORG00000011102	Farsb	100	76.271	Dipodomys_ordii
ENSHBUG00000022379	farsb	100	62.162	FBgn0039175	beta-PheRS	100	63.744	Drosophila_melanogaster
ENSHBUG00000022379	farsb	97	72.456	ENSETEG00000015080	FARSB	100	74.211	Echinops_telfairi
ENSHBUG00000022379	farsb	100	63.559	ENSEBUG00000006846	farsb	100	65.424	Eptatretus_burgeri
ENSHBUG00000022379	farsb	100	75.085	ENSEASG00005011297	FARSB	100	76.780	Equus_asinus_asinus
ENSHBUG00000022379	farsb	100	72.504	ENSECAG00000023086	FARSB	98	77.264	Equus_caballus
ENSHBUG00000022379	farsb	100	58.983	ENSEEUG00000007441	FARSB	91	70.213	Erinaceus_europaeus
ENSHBUG00000022379	farsb	97	83.363	ENSELUG00000014767	farsb	99	85.989	Esox_lucius
ENSHBUG00000022379	farsb	100	74.915	ENSFCAG00000026772	FARSB	100	76.780	Felis_catus
ENSHBUG00000022379	farsb	97	73.111	ENSFALG00000006739	FARSB	96	75.395	Ficedula_albicollis
ENSHBUG00000022379	farsb	100	74.915	ENSFDAG00000008871	FARSB	100	76.610	Fukomys_damarensis
ENSHBUG00000022379	farsb	100	88.625	ENSFHEG00000020939	farsb	98	91.667	Fundulus_heteroclitus
ENSHBUG00000022379	farsb	91	83.117	ENSGMOG00000013047	farsb	99	85.529	Gadus_morhua
ENSHBUG00000022379	farsb	100	75.042	ENSGALG00000005236	FARSB	100	76.910	Gallus_gallus
ENSHBUG00000022379	farsb	100	86.587	ENSGAFG00000020900	farsb	100	85.849	Gambusia_affinis
ENSHBUG00000022379	farsb	91	86.642	ENSGACG00000000261	farsb	99	89.796	Gasterosteus_aculeatus
ENSHBUG00000022379	farsb	100	75.382	ENSGAGG00000016575	FARSB	98	77.589	Gopherus_agassizii
ENSHBUG00000022379	farsb	100	74.915	ENSHGLG00000015965	FARSB	100	76.610	Heterocephalus_glaber_female
ENSHBUG00000022379	farsb	100	74.915	ENSHGLG00100001035	FARSB	100	76.610	Heterocephalus_glaber_male
ENSHBUG00000022379	farsb	91	83.523	ENSHCOG00000016462	farsb	100	83.523	Hippocampus_comes
ENSHBUG00000022379	farsb	100	81.324	ENSIPUG00000002754	farsb	100	83.701	Ictalurus_punctatus
ENSHBUG00000022379	farsb	100	75.254	ENSSTOG00000016169	FARSB	100	76.949	Ictidomys_tridecemlineatus
ENSHBUG00000022379	farsb	100	74.746	ENSJJAG00000003267	Farsb	100	76.441	Jaculus_jaculus
ENSHBUG00000022379	farsb	100	80.203	ENSKMAG00000005363	farsb	100	82.432	Kryptolebias_marmoratus
ENSHBUG00000022379	farsb	100	87.946	ENSLBEG00000018127	farsb	100	87.500	Labrus_bergylta
ENSHBUG00000022379	farsb	100	77.080	ENSLACG00000002551	FARSB	100	79.457	Latimeria_chalumnae
ENSHBUG00000022379	farsb	100	81.834	ENSLOCG00000004136	farsb	100	84.550	Lepisosteus_oculatus
ENSHBUG00000022379	farsb	100	74.746	ENSLAFG00000015659	FARSB	100	76.102	Loxodonta_africana
ENSHBUG00000022379	farsb	100	74.576	ENSMFAG00000036645	FARSB	100	76.271	Macaca_fascicularis
ENSHBUG00000022379	farsb	100	72.373	ENSMMUG00000007685	FARSB	100	74.068	Macaca_mulatta
ENSHBUG00000022379	farsb	100	74.407	ENSMNEG00000030672	FARSB	100	76.102	Macaca_nemestrina
ENSHBUG00000022379	farsb	100	74.746	ENSMLEG00000042060	FARSB	100	76.441	Mandrillus_leucophaeus
ENSHBUG00000022379	farsb	100	89.474	ENSMAMG00000011835	farsb	100	88.588	Mastacembelus_armatus
ENSHBUG00000022379	farsb	96	93.440	ENSMZEG00005004544	farsb	100	96.106	Maylandia_zebra
ENSHBUG00000022379	farsb	95	73.882	ENSMGAG00000004670	FARSB	100	76.029	Meleagris_gallopavo
ENSHBUG00000022379	farsb	71	78.125	ENSMAUG00000017805	Farsb	100	78.125	Mesocricetus_auratus
ENSHBUG00000022379	farsb	100	76.481	ENSMICG00000002495	FARSB	100	77.119	Microcebus_murinus
ENSHBUG00000022379	farsb	100	75.722	ENSMOCG00000003181	Farsb	100	77.419	Microtus_ochrogaster
ENSHBUG00000022379	farsb	100	83.944	ENSMMOG00000006265	farsb	100	83.944	Mola_mola
ENSHBUG00000022379	farsb	100	75.382	ENSMODG00000021192	FARSB	100	77.250	Monodelphis_domestica
ENSHBUG00000022379	farsb	93	88.748	ENSMALG00000021188	farsb	92	92.015	Monopterus_albus
ENSHBUG00000022379	farsb	100	74.915	MGP_CAROLIEiJ_G0014310	Farsb	100	76.441	Mus_caroli
ENSHBUG00000022379	farsb	100	74.746	ENSMUSG00000026245	Farsb	100	76.271	Mus_musculus
ENSHBUG00000022379	farsb	100	74.915	MGP_PahariEiJ_G0027548	Farsb	100	76.441	Mus_pahari
ENSHBUG00000022379	farsb	100	74.746	MGP_SPRETEiJ_G0015116	Farsb	100	76.271	Mus_spretus
ENSHBUG00000022379	farsb	100	74.915	ENSMPUG00000016677	FARSB	100	76.441	Mustela_putorius_furo
ENSHBUG00000022379	farsb	100	75.424	ENSMLUG00000010904	FARSB	100	77.119	Myotis_lucifugus
ENSHBUG00000022379	farsb	100	74.024	ENSNGAG00000014602	Farsb	100	75.722	Nannospalax_galili
ENSHBUG00000022379	farsb	100	98.821	ENSNBRG00000003198	farsb	100	98.821	Neolamprologus_brichardi
ENSHBUG00000022379	farsb	100	74.915	ENSNLEG00000009638	FARSB	100	76.610	Nomascus_leucogenys
ENSHBUG00000022379	farsb	100	65.195	ENSMEUG00000010798	FARSB	100	67.233	Notamacropus_eugenii
ENSHBUG00000022379	farsb	100	57.360	ENSOPRG00000003292	FARSB	100	57.360	Ochotona_princeps
ENSHBUG00000022379	farsb	100	74.915	ENSODEG00000005451	FARSB	100	76.610	Octodon_degus
ENSHBUG00000022379	farsb	100	95.246	ENSONIG00000014639	farsb	100	98.472	Oreochromis_niloticus
ENSHBUG00000022379	farsb	91	72.150	ENSOANG00000015387	FARSB	99	74.532	Ornithorhynchus_anatinus
ENSHBUG00000022379	farsb	91	75.651	ENSOCUG00000007828	FARSB	94	77.138	Oryctolagus_cuniculus
ENSHBUG00000022379	farsb	100	88.625	ENSORLG00000009135	farsb	100	89.474	Oryzias_latipes
ENSHBUG00000022379	farsb	100	88.625	ENSORLG00015001072	farsb	100	87.994	Oryzias_latipes_hsok
ENSHBUG00000022379	farsb	100	89.529	ENSOMEG00000019009	farsb	100	89.529	Oryzias_melastigma
ENSHBUG00000022379	farsb	100	69.565	ENSOGAG00000010125	FARSB	100	71.070	Otolemur_garnettii
ENSHBUG00000022379	farsb	100	75.254	ENSOARG00000020329	FARSB	100	76.949	Ovis_aries
ENSHBUG00000022379	farsb	100	75.254	ENSPPAG00000039268	FARSB	100	76.949	Pan_paniscus
ENSHBUG00000022379	farsb	100	74.746	ENSPPRG00000010687	FARSB	100	76.610	Panthera_pardus
ENSHBUG00000022379	farsb	100	74.407	ENSPTIG00000004299	FARSB	100	76.271	Panthera_tigris_altaica
ENSHBUG00000022379	farsb	100	75.254	ENSPTRG00000012974	FARSB	100	76.949	Pan_troglodytes
ENSHBUG00000022379	farsb	100	74.746	ENSPANG00000016304	FARSB	100	76.441	Papio_anubis
ENSHBUG00000022379	farsb	100	80.475	ENSPKIG00000006661	farsb	100	82.513	Paramormyrops_kingsleyae
ENSHBUG00000022379	farsb	99	74.276	ENSPSIG00000006248	FARSB	99	76.491	Pelodiscus_sinensis
ENSHBUG00000022379	farsb	83	86.299	ENSPMGG00000002815	farsb	100	89.775	Periophthalmus_magnuspinnatus
ENSHBUG00000022379	farsb	100	75.085	ENSPEMG00000003131	Farsb	100	76.610	Peromyscus_maniculatus_bairdii
ENSHBUG00000022379	farsb	100	74.873	ENSPCIG00000019458	FARSB	100	76.910	Phascolarctos_cinereus
ENSHBUG00000022379	farsb	100	89.134	ENSPLAG00000001104	farsb	100	87.382	Poecilia_latipinna
ENSHBUG00000022379	farsb	100	89.474	ENSPMEG00000017658	farsb	100	87.854	Poecilia_mexicana
ENSHBUG00000022379	farsb	100	88.964	ENSPREG00000010583	farsb	100	87.500	Poecilia_reticulata
ENSHBUG00000022379	farsb	100	74.915	ENSPPYG00000013221	FARSB	100	76.610	Pongo_abelii
ENSHBUG00000022379	farsb	84	66.801	ENSPCAG00000002757	FARSB	84	68.813	Procavia_capensis
ENSHBUG00000022379	farsb	66	85.714	ENSPCOG00000028852	FARSB	100	85.714	Propithecus_coquereli
ENSHBUG00000022379	farsb	100	74.576	ENSPVAG00000006985	FARSB	100	76.271	Pteropus_vampyrus
ENSHBUG00000022379	farsb	100	80.442	ENSPNYG00000011433	farsb	100	83.022	Pundamilia_nyererei
ENSHBUG00000022379	farsb	100	81.664	ENSPNAG00000021802	farsb	100	84.041	Pygocentrus_nattereri
ENSHBUG00000022379	farsb	100	74.576	ENSRNOG00000014119	Farsb	100	76.271	Rattus_norvegicus
ENSHBUG00000022379	farsb	92	74.677	ENSRBIG00000033191	FARSB	97	76.525	Rhinopithecus_bieti
ENSHBUG00000022379	farsb	100	74.746	ENSRROG00000029388	FARSB	100	76.441	Rhinopithecus_roxellana
ENSHBUG00000022379	farsb	100	45.082	YLR060W	FRS1	100	45.902	Saccharomyces_cerevisiae
ENSHBUG00000022379	farsb	100	67.119	ENSSBOG00000019084	FARSB	100	68.814	Saimiri_boliviensis_boliviensis
ENSHBUG00000022379	farsb	91	69.104	ENSSHAG00000015752	FARSB	99	71.298	Sarcophilus_harrisii
ENSHBUG00000022379	farsb	100	78.947	ENSSFOG00015007850	farsb	100	81.494	Scleropages_formosus
ENSHBUG00000022379	farsb	100	92.348	ENSSMAG00000020668	farsb	100	92.348	Scophthalmus_maximus
ENSHBUG00000022379	farsb	100	91.341	ENSSDUG00000009685	farsb	100	90.095	Seriola_dumerili
ENSHBUG00000022379	farsb	100	91.511	ENSSLDG00000025206	farsb	100	91.274	Seriola_lalandi_dorsalis
ENSHBUG00000022379	farsb	59	75.862	ENSSARG00000005655	-	65	75.862	Sorex_araneus
ENSHBUG00000022379	farsb	95	70.410	ENSSPUG00000002245	FARSB	100	72.906	Sphenodon_punctatus
ENSHBUG00000022379	farsb	100	89.517	ENSSPAG00000007367	farsb	100	89.517	Stegastes_partitus
ENSHBUG00000022379	farsb	100	68.644	ENSSSCG00000032016	-	100	70.339	Sus_scrofa
ENSHBUG00000022379	farsb	100	73.898	ENSSSCG00000016226	-	100	75.593	Sus_scrofa
ENSHBUG00000022379	farsb	97	72.935	ENSTGUG00000007788	FARSB	99	75.044	Taeniopygia_guttata
ENSHBUG00000022379	farsb	100	84.211	ENSTRUG00000009483	farsb	100	83.255	Takifugu_rubripes
ENSHBUG00000022379	farsb	100	83.701	ENSTNIG00000014310	farsb	100	86.078	Tetraodon_nigroviridis
ENSHBUG00000022379	farsb	100	51.017	ENSTBEG00000003136	FARSB	100	52.712	Tupaia_belangeri
ENSHBUG00000022379	farsb	88	75.879	ENSTTRG00000009082	FARSB	88	75.879	Tursiops_truncatus
ENSHBUG00000022379	farsb	84	70.683	ENSUAMG00000024613	FARSB	98	72.691	Ursus_americanus
ENSHBUG00000022379	farsb	100	75.085	ENSUMAG00000017995	FARSB	100	76.780	Ursus_maritimus
ENSHBUG00000022379	farsb	91	72.325	ENSVPAG00000006844	FARSB	100	73.432	Vicugna_pacos
ENSHBUG00000022379	farsb	100	76.592	ENSVVUG00000024025	FARSB	100	77.119	Vulpes_vulpes
ENSHBUG00000022379	farsb	100	73.390	ENSXETG00000002934	farsb	100	75.763	Xenopus_tropicalis
ENSHBUG00000022379	farsb	100	87.267	ENSXMAG00000008280	farsb	100	86.439	Xiphophorus_maculatus