EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000022496 (Gene tree)
Gene ID: 102291919
Gene Symbol: prpf38b
Alias: wu:fc43b05|zgc:63496
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 7488 bases
Position: chrJH425358.1:689510-696997
Accession: 102291919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000020245	PRP38	PF03371.15	3.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000029822	-	3007	XM_005920465	ENSHBUP00000020245	461 (aa)	XP_005920527	UPI0003AF52B0

Gene Model

Click here to download ENSHBUG00000022496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000022496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000022496	prpf38b	62	94.792	ENSAPOG00000012791	-	98	90.632	Acanthochromis_polyacanthus
ENSHBUG00000022496	prpf38b	62	94.792	ENSAPOG00000005297	prpf38b	98	90.632	Acanthochromis_polyacanthus
ENSHBUG00000022496	prpf38b	62	94.444	ENSAOCG00000012675	prpf38b	89	90.850	Amphiprion_ocellaris
ENSHBUG00000022496	prpf38b	62	94.097	ENSAPEG00000010974	prpf38b	94	96.951	Amphiprion_percula
ENSHBUG00000022496	prpf38b	100	99.783	ENSACLG00000001712	prpf38b	100	99.783	Astatotilapia_calliptera
ENSHBUG00000022496	prpf38b	98	69.715	ENSDARG00000053101	prpf38b	95	89.634	Danio_rerio
ENSHBUG00000022496	prpf38b	98	85.903	ENSFHEG00000002861	prpf38b	98	85.903	Fundulus_heteroclitus
ENSHBUG00000022496	prpf38b	99	83.298	ENSGACG00000015154	prpf38b	99	83.726	Gasterosteus_aculeatus
ENSHBUG00000022496	prpf38b	96	68.790	ENSIPUG00000014942	prpf38b	95	64.317	Ictalurus_punctatus
ENSHBUG00000022496	prpf38b	98	87.336	ENSLBEG00000024500	prpf38b	89	94.512	Labrus_bergylta
ENSHBUG00000022496	prpf38b	98	92.810	ENSMAMG00000010641	prpf38b	98	92.810	Mastacembelus_armatus
ENSHBUG00000022496	prpf38b	100	99.783	ENSMZEG00005025536	prpf38b	100	99.783	Maylandia_zebra
ENSHBUG00000022496	prpf38b	100	100.000	ENSPNYG00000007625	prpf38b	100	100.000	Pundamilia_nyererei
ENSHBUG00000022496	prpf38b	98	92.576	ENSSPAG00000023160	-	98	91.266	Stegastes_partitus