EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000022537 (Gene tree)
Gene ID: 102306279
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 13767 bases
Position: chrJH425829.1:181313-195079
Accession: 102306279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000020263	zf-C2H2	PF00096.26	5.8e-12	1	2
ENSHBUP00000020263	zf-C2H2	PF00096.26	5.8e-12	2	2
ENSHBUP00000020263	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000029840	-	3538	XM_005946758	ENSHBUP00000020263	424 (aa)	XP_005946820	UPI0003BD4E57

Gene Model

Click here to download ENSHBUG00000022537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000022537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000022537	-	68	35.873	ENSHBUG00000019660	prdm14	55	38.662
ENSHBUG00000022537	-	63	42.105	ENSHBUG00000023375	prdm5	98	42.105
ENSHBUG00000022537	-	93	77.694	ENSHBUG00000022878	prdm12b	100	76.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000022537	-	80	80.994	ENSG00000130711	PRDM12	88	80.994	Homo_sapiens
ENSHBUG00000022537	-	93	69.424	ENSAPOG00000018234	-	100	69.424	Acanthochromis_polyacanthus
ENSHBUG00000022537	-	93	77.531	ENSAPOG00000016051	prdm12b	100	77.037	Acanthochromis_polyacanthus
ENSHBUG00000022537	-	80	78.886	ENSAMEG00000016234	PRDM12	99	78.886	Ailuropoda_melanoleuca
ENSHBUG00000022537	-	93	89.196	ENSACIG00000005193	-	100	88.442	Amphilophus_citrinellus
ENSHBUG00000022537	-	93	77.612	ENSACIG00000019578	prdm12b	100	77.419	Amphilophus_citrinellus
ENSHBUG00000022537	-	93	78.055	ENSAOCG00000015040	prdm12b	100	77.556	Amphiprion_ocellaris
ENSHBUG00000022537	-	93	78.643	ENSAPEG00000015092	prdm12b	100	78.141	Amphiprion_percula
ENSHBUG00000022537	-	93	84.478	ENSAPEG00000022849	-	99	83.206	Amphiprion_percula
ENSHBUG00000022537	-	93	87.376	ENSATEG00000014595	-	100	87.376	Anabas_testudineus
ENSHBUG00000022537	-	80	80.994	ENSANAG00000020616	PRDM12	95	80.994	Aotus_nancymaae
ENSHBUG00000022537	-	93	76.396	ENSACLG00000011876	prdm12b	100	75.127	Astatotilapia_calliptera
ENSHBUG00000022537	-	93	100.000	ENSACLG00000007631	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000022537	-	93	75.127	ENSAMXG00000008540	PRDM12	100	73.350	Astyanax_mexicanus
ENSHBUG00000022537	-	93	79.188	ENSAMXG00000033665	prdm12b	100	78.934	Astyanax_mexicanus
ENSHBUG00000022537	-	80	81.871	ENSBTAG00000023797	PRDM12	90	81.871	Bos_taurus
ENSHBUG00000022537	-	80	80.994	ENSCJAG00000020540	PRDM12	90	80.994	Callithrix_jacchus
ENSHBUG00000022537	-	71	82.333	ENSCAFG00000023076	PRDM12	85	85.512	Canis_familiaris
ENSHBUG00000022537	-	80	81.579	ENSCAFG00020024046	PRDM12	89	81.579	Canis_lupus_dingo
ENSHBUG00000022537	-	80	81.579	ENSCHIG00000025005	PRDM12	90	81.579	Capra_hircus
ENSHBUG00000022537	-	82	77.714	ENSCPOG00000005901	PRDM12	95	80.909	Cavia_porcellus
ENSHBUG00000022537	-	80	80.994	ENSCCAG00000037485	PRDM12	89	80.994	Cebus_capucinus
ENSHBUG00000022537	-	80	80.994	ENSCATG00000020327	PRDM12	89	80.994	Cercocebus_atys
ENSHBUG00000022537	-	82	79.943	ENSCLAG00000005499	PRDM12	91	79.943	Chinchilla_lanigera
ENSHBUG00000022537	-	80	80.994	ENSCSAG00000014756	PRDM12	89	80.994	Chlorocebus_sabaeus
ENSHBUG00000022537	-	93	76.142	ENSCPBG00000022628	PRDM12	99	75.381	Chrysemys_picta_bellii
ENSHBUG00000022537	-	80	81.871	ENSCGRG00001015005	Prdm12	89	81.871	Cricetulus_griseus_chok1gshd
ENSHBUG00000022537	-	93	76.010	ENSCVAG00000017166	prdm12b	100	76.574	Cyprinodon_variegatus
ENSHBUG00000022537	-	93	82.382	ENSCVAG00000000944	-	100	82.630	Cyprinodon_variegatus
ENSHBUG00000022537	-	93	79.949	ENSDARG00000007430	prdm12b	100	78.426	Danio_rerio
ENSHBUG00000022537	-	80	81.341	ENSDNOG00000042302	PRDM12	90	81.341	Dasypus_novemcinctus
ENSHBUG00000022537	-	77	63.714	ENSEBUG00000016780	prdm12b	75	63.714	Eptatretus_burgeri
ENSHBUG00000022537	-	82	80.229	ENSEASG00005008472	PRDM12	99	73.858	Equus_asinus_asinus
ENSHBUG00000022537	-	82	80.229	ENSECAG00000005933	PRDM12	99	73.858	Equus_caballus
ENSHBUG00000022537	-	93	80.153	ENSELUG00000009905	prdm12b	100	77.863	Esox_lucius
ENSHBUG00000022537	-	93	72.475	ENSELUG00000013674	PRDM12	100	72.705	Esox_lucius
ENSHBUG00000022537	-	80	81.579	ENSFCAG00000043086	PRDM12	89	81.579	Felis_catus
ENSHBUG00000022537	-	93	77.411	ENSFALG00000001445	PRDM12	90	75.758	Ficedula_albicollis
ENSHBUG00000022537	-	93	75.758	ENSFHEG00000003944	prdm12b	100	76.000	Fundulus_heteroclitus
ENSHBUG00000022537	-	93	85.213	ENSFHEG00000007746	-	100	85.213	Fundulus_heteroclitus
ENSHBUG00000022537	-	93	77.665	ENSGMOG00000011797	prdm12b	100	77.411	Gadus_morhua
ENSHBUG00000022537	-	93	77.411	ENSGALG00000003895	PRDM12	99	75.888	Gallus_gallus
ENSHBUG00000022537	-	93	77.020	ENSGAFG00000010827	prdm12b	99	77.330	Gambusia_affinis
ENSHBUG00000022537	-	93	77.582	ENSGACG00000016713	prdm12b	99	76.574	Gasterosteus_aculeatus
ENSHBUG00000022537	-	93	76.142	ENSGAGG00000014083	PRDM12	99	75.381	Gopherus_agassizii
ENSHBUG00000022537	-	80	80.702	ENSGGOG00000010568	PRDM12	89	80.702	Gorilla_gorilla
ENSHBUG00000022537	-	82	80.229	ENSHGLG00000013939	PRDM12	91	80.516	Heterocephalus_glaber_female
ENSHBUG00000022537	-	80	79.830	ENSHCOG00000003663	prdm12b	100	71.040	Hippocampus_comes
ENSHBUG00000022537	-	93	73.750	ENSHCOG00000021167	-	100	71.250	Hippocampus_comes
ENSHBUG00000022537	-	93	72.843	ENSIPUG00000019544	PRDM12	100	72.843	Ictalurus_punctatus
ENSHBUG00000022537	-	93	79.949	ENSIPUG00000017053	prdm12b	100	78.934	Ictalurus_punctatus
ENSHBUG00000022537	-	80	81.579	ENSSTOG00000005986	PRDM12	85	81.579	Ictidomys_tridecemlineatus
ENSHBUG00000022537	-	80	81.579	ENSJJAG00000005424	Prdm12	98	81.579	Jaculus_jaculus
ENSHBUG00000022537	-	88	83.690	ENSKMAG00000021205	-	94	82.979	Kryptolebias_marmoratus
ENSHBUG00000022537	-	93	72.530	ENSKMAG00000016921	prdm12b	100	72.289	Kryptolebias_marmoratus
ENSHBUG00000022537	-	93	78.643	ENSLBEG00000017769	prdm12b	100	78.141	Labrus_bergylta
ENSHBUG00000022537	-	93	87.990	ENSLBEG00000007776	-	100	87.990	Labrus_bergylta
ENSHBUG00000022537	-	93	75.949	ENSLACG00000017560	PRDM12	100	74.937	Latimeria_chalumnae
ENSHBUG00000022537	-	93	79.747	ENSLOCG00000005429	prdm12b	100	78.228	Lepisosteus_oculatus
ENSHBUG00000022537	-	80	79.827	ENSLAFG00000006979	PRDM12	88	79.827	Loxodonta_africana
ENSHBUG00000022537	-	80	80.994	ENSMFAG00000040322	PRDM12	88	80.994	Macaca_fascicularis
ENSHBUG00000022537	-	80	80.994	ENSMNEG00000037234	PRDM12	89	80.994	Macaca_nemestrina
ENSHBUG00000022537	-	93	87.879	ENSMAMG00000018988	-	100	89.394	Mastacembelus_armatus
ENSHBUG00000022537	-	93	76.559	ENSMAMG00000013212	prdm12b	100	76.309	Mastacembelus_armatus
ENSHBUG00000022537	-	93	99.494	ENSMZEG00005000415	PRDM12	100	99.494	Maylandia_zebra
ENSHBUG00000022537	-	91	77.062	ENSMGAG00000005438	PRDM12	98	75.515	Meleagris_gallopavo
ENSHBUG00000022537	-	93	73.869	ENSMAUG00000013040	Prdm12	89	81.871	Mesocricetus_auratus
ENSHBUG00000022537	-	80	81.579	ENSMICG00000015480	PRDM12	90	81.579	Microcebus_murinus
ENSHBUG00000022537	-	80	82.164	ENSMOCG00000021026	Prdm12	89	82.164	Microtus_ochrogaster
ENSHBUG00000022537	-	93	75.696	ENSMODG00000012108	PRDM12	99	74.177	Monodelphis_domestica
ENSHBUG00000022537	-	78	76.119	ENSMALG00000021901	prdm12b	96	75.684	Monopterus_albus
ENSHBUG00000022537	-	80	81.871	MGP_CAROLIEiJ_G0023414	Prdm12	99	74.112	Mus_caroli
ENSHBUG00000022537	-	80	81.871	ENSMUSG00000079466	Prdm12	99	74.112	Mus_musculus
ENSHBUG00000022537	-	80	81.871	MGP_PahariEiJ_G0024871	Prdm12	99	74.112	Mus_pahari
ENSHBUG00000022537	-	80	81.871	MGP_SPRETEiJ_G0024331	Prdm12	99	74.112	Mus_spretus
ENSHBUG00000022537	-	80	81.579	ENSNGAG00000018480	Prdm12	99	73.096	Nannospalax_galili
ENSHBUG00000022537	-	93	86.260	ENSNBRG00000024312	-	100	86.260	Neolamprologus_brichardi
ENSHBUG00000022537	-	93	76.617	ENSNBRG00000006727	prdm12b	100	76.675	Neolamprologus_brichardi
ENSHBUG00000022537	-	93	68.101	ENSMEUG00000003828	PRDM12	99	66.582	Notamacropus_eugenii
ENSHBUG00000022537	-	80	81.287	ENSOPRG00000008680	PRDM12	98	80.994	Ochotona_princeps
ENSHBUG00000022537	-	80	81.871	ENSODEG00000016282	PRDM12	61	81.871	Octodon_degus
ENSHBUG00000022537	-	58	75.806	ENSOANG00000001043	PRDM12	100	74.194	Ornithorhynchus_anatinus
ENSHBUG00000022537	-	75	80.757	ENSOCUG00000008241	PRDM12	96	81.073	Oryctolagus_cuniculus
ENSHBUG00000022537	-	93	89.698	ENSORLG00000017558	-	100	88.191	Oryzias_latipes
ENSHBUG00000022537	-	93	75.622	ENSORLG00000007114	prdm12b	99	74.378	Oryzias_latipes
ENSHBUG00000022537	-	93	76.368	ENSORLG00020019565	prdm12b	99	75.373	Oryzias_latipes_hni
ENSHBUG00000022537	-	93	89.474	ENSORLG00020013167	-	100	87.970	Oryzias_latipes_hni
ENSHBUG00000022537	-	93	89.447	ENSORLG00015003435	-	100	87.940	Oryzias_latipes_hsok
ENSHBUG00000022537	-	93	76.060	ENSORLG00015007621	prdm12b	99	75.312	Oryzias_latipes_hsok
ENSHBUG00000022537	-	93	89.500	ENSOMEG00000007762	-	100	87.000	Oryzias_melastigma
ENSHBUG00000022537	-	93	73.762	ENSOMEG00000004134	prdm12b	99	73.762	Oryzias_melastigma
ENSHBUG00000022537	-	80	81.579	ENSOGAG00000007557	PRDM12	97	81.579	Otolemur_garnettii
ENSHBUG00000022537	-	71	78.289	ENSPPAG00000031506	-	97	78.289	Pan_paniscus
ENSHBUG00000022537	-	93	68.010	ENSPPRG00000023024	PRDM12	83	74.927	Panthera_pardus
ENSHBUG00000022537	-	80	80.994	ENSPTRG00000021475	PRDM12	89	80.994	Pan_troglodytes
ENSHBUG00000022537	-	80	80.994	ENSPTRG00000043324	-	89	80.994	Pan_troglodytes
ENSHBUG00000022537	-	80	80.994	ENSPANG00000025967	PRDM12	89	80.994	Papio_anubis
ENSHBUG00000022537	-	93	79.345	ENSPKIG00000007228	prdm12b	100	78.589	Paramormyrops_kingsleyae
ENSHBUG00000022537	-	80	77.616	ENSPKIG00000004305	PRDM12	94	77.193	Paramormyrops_kingsleyae
ENSHBUG00000022537	-	93	76.396	ENSPSIG00000006739	PRDM12	99	75.381	Pelodiscus_sinensis
ENSHBUG00000022537	-	93	75.696	ENSPMGG00000008867	prdm12b	100	74.747	Periophthalmus_magnuspinnatus
ENSHBUG00000022537	-	93	79.902	ENSPMGG00000002356	-	100	79.198	Periophthalmus_magnuspinnatus
ENSHBUG00000022537	-	82	80.571	ENSPEMG00000009969	Prdm12	91	80.516	Peromyscus_maniculatus_bairdii
ENSHBUG00000022537	-	93	75.949	ENSPCIG00000024119	PRDM12	99	74.430	Phascolarctos_cinereus
ENSHBUG00000022537	-	93	76.131	ENSPFOG00000019841	prdm12b	100	75.940	Poecilia_formosa
ENSHBUG00000022537	-	93	75.315	ENSPLAG00000016626	prdm12b	99	76.574	Poecilia_latipinna
ENSHBUG00000022537	-	90	75.979	ENSPMEG00000016698	prdm12b	99	77.083	Poecilia_mexicana
ENSHBUG00000022537	-	92	77.835	ENSPREG00000003211	-	97	77.835	Poecilia_reticulata
ENSHBUG00000022537	-	93	75.567	ENSPREG00000015073	prdm12b	99	76.826	Poecilia_reticulata
ENSHBUG00000022537	-	80	80.994	ENSPPYG00000019694	PRDM12	92	80.994	Pongo_abelii
ENSHBUG00000022537	-	80	81.579	ENSPCOG00000022255	PRDM12	89	81.579	Propithecus_coquereli
ENSHBUG00000022537	-	80	81.579	ENSPVAG00000001511	PRDM12	89	81.579	Pteropus_vampyrus
ENSHBUG00000022537	-	93	99.494	ENSPNYG00000013589	-	100	99.494	Pundamilia_nyererei
ENSHBUG00000022537	-	93	77.556	ENSPNYG00000009607	prdm12b	100	76.559	Pundamilia_nyererei
ENSHBUG00000022537	-	93	79.188	ENSPNAG00000024532	prdm12b	100	79.949	Pygocentrus_nattereri
ENSHBUG00000022537	-	93	73.671	ENSPNAG00000013396	PRDM12	100	74.177	Pygocentrus_nattereri
ENSHBUG00000022537	-	80	81.871	ENSRNOG00000009218	Prdm12	99	74.112	Rattus_norvegicus
ENSHBUG00000022537	-	79	80.539	ENSRBIG00000042712	PRDM12	90	78.736	Rhinopithecus_bieti
ENSHBUG00000022537	-	79	80.769	ENSRROG00000043554	PRDM12	99	80.769	Rhinopithecus_roxellana
ENSHBUG00000022537	-	93	75.758	ENSSHAG00000015972	PRDM12	99	73.990	Sarcophilus_harrisii
ENSHBUG00000022537	-	93	73.710	ENSSMAG00000003754	prdm12b	100	73.430	Scophthalmus_maximus
ENSHBUG00000022537	-	93	75.735	ENSSDUG00000023498	prdm12b	100	74.817	Seriola_dumerili
ENSHBUG00000022537	-	93	85.608	ENSSDUG00000019071	-	100	85.112	Seriola_dumerili
ENSHBUG00000022537	-	93	83.038	ENSSLDG00000013562	-	100	83.038	Seriola_lalandi_dorsalis
ENSHBUG00000022537	-	93	76.543	ENSSLDG00000009557	prdm12b	100	74.877	Seriola_lalandi_dorsalis
ENSHBUG00000022537	-	93	77.411	ENSSPUG00000013424	PRDM12	99	75.635	Sphenodon_punctatus
ENSHBUG00000022537	-	93	75.622	ENSSPAG00000022420	-	100	75.622	Stegastes_partitus
ENSHBUG00000022537	-	93	77.363	ENSSPAG00000018824	prdm12b	100	76.368	Stegastes_partitus
ENSHBUG00000022537	-	80	81.579	ENSSSCG00000005703	PRDM12	89	81.579	Sus_scrofa
ENSHBUG00000022537	-	93	80.506	ENSTRUG00000013239	-	100	80.506	Takifugu_rubripes
ENSHBUG00000022537	-	93	76.515	ENSTRUG00000018659	prdm12b	100	76.010	Takifugu_rubripes
ENSHBUG00000022537	-	93	76.826	ENSTNIG00000005859	-	100	76.071	Tetraodon_nigroviridis
ENSHBUG00000022537	-	93	75.253	ENSTNIG00000009020	prdm12b	99	74.055	Tetraodon_nigroviridis
ENSHBUG00000022537	-	80	81.579	ENSUAMG00000009653	PRDM12	90	81.579	Ursus_americanus
ENSHBUG00000022537	-	80	81.579	ENSVVUG00000027662	PRDM12	77	81.579	Vulpes_vulpes
ENSHBUG00000022537	-	93	76.515	ENSXCOG00000002836	prdm12b	99	77.078	Xiphophorus_couchianus
ENSHBUG00000022537	-	93	85.360	ENSXMAG00000028012	-	100	85.360	Xiphophorus_maculatus
ENSHBUG00000022537	-	93	76.515	ENSXMAG00000005537	prdm12b	100	77.078	Xiphophorus_maculatus