EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000022628 (Gene tree)
Gene ID: 102294420
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 16345 bases
Position: chrJH425695.1:156575-172919
Accession: 102294420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000020301	AARP2CN	PF08142.12	5.4e-32	1	1
ENSHBUP00000034772	AARP2CN	PF08142.12	5.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000029886	-	5669	XM_005943341	ENSHBUP00000020301	1198 (aa)	XP_005943403	UPI0003BC800A
ENSHBUT00000029876	-	5560	-	ENSHBUP00000034772	1198 (aa)	-	UPI0003BC800A

Gene Model

Click here to download ENSHBUG00000022628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000022628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000022628	bms1	99	61.378	ENSG00000165733	BMS1	87	68.571	Homo_sapiens
ENSHBUG00000022628	bms1	87	82.092	ENSAPOG00000002296	bms1	100	81.509	Acanthochromis_polyacanthus
ENSHBUG00000022628	bms1	99	61.879	ENSAMEG00000016834	BMS1	87	68.218	Ailuropoda_melanoleuca
ENSHBUG00000022628	bms1	99	84.422	ENSACIG00000002588	bms1	100	82.756	Amphilophus_citrinellus
ENSHBUG00000022628	bms1	100	82.691	ENSAOCG00000018088	bms1	100	82.594	Amphiprion_ocellaris
ENSHBUG00000022628	bms1	100	82.909	ENSAPEG00000014673	bms1	100	82.812	Amphiprion_percula
ENSHBUG00000022628	bms1	100	81.536	ENSATEG00000023465	bms1	100	81.536	Anabas_testudineus
ENSHBUG00000022628	bms1	90	70.547	ENSAPLG00000003759	BMS1	86	71.303	Anas_platyrhynchos
ENSHBUG00000022628	bms1	98	66.021	ENSACAG00000004537	-	87	69.614	Anolis_carolinensis
ENSHBUG00000022628	bms1	95	67.943	ENSANAG00000023432	BMS1	87	67.464	Aotus_nancymaae
ENSHBUG00000022628	bms1	100	99.583	ENSACLG00000001294	bms1	100	99.583	Astatotilapia_calliptera
ENSHBUG00000022628	bms1	93	76.809	ENSAMXG00000011236	bms1	97	70.228	Astyanax_mexicanus
ENSHBUG00000022628	bms1	54	67.079	ENSBTAG00000012878	BMS1	86	69.076	Bos_taurus
ENSHBUG00000022628	bms1	85	54.774	WBGene00022021	Y61A9LA.10	93	57.418	Caenorhabditis_elegans
ENSHBUG00000022628	bms1	97	67.334	ENSCJAG00000021705	BMS1	87	67.943	Callithrix_jacchus
ENSHBUG00000022628	bms1	99	61.963	ENSCAFG00000007114	BMS1	87	67.710	Canis_familiaris
ENSHBUG00000022628	bms1	99	61.963	ENSCAFG00020025282	BMS1	87	67.710	Canis_lupus_dingo
ENSHBUG00000022628	bms1	54	66.924	ENSCHIG00000023251	BMS1	86	69.076	Capra_hircus
ENSHBUG00000022628	bms1	99	58.262	ENSCAPG00000008652	BMS1	93	64.453	Cavia_aperea
ENSHBUG00000022628	bms1	99	61.198	ENSCPOG00000000502	BMS1	93	66.337	Cavia_porcellus
ENSHBUG00000022628	bms1	53	58.307	ENSCCAG00000024969	-	86	58.842	Cebus_capucinus
ENSHBUG00000022628	bms1	99	62.056	ENSCATG00000030625	-	87	68.254	Cercocebus_atys
ENSHBUG00000022628	bms1	89	47.882	ENSCATG00000008695	-	77	58.407	Cercocebus_atys
ENSHBUG00000022628	bms1	99	61.515	ENSCLAG00000002446	BMS1	87	67.628	Chinchilla_lanigera
ENSHBUG00000022628	bms1	97	68.000	ENSCSAG00000011118	BMS1	87	68.254	Chlorocebus_sabaeus
ENSHBUG00000022628	bms1	99	60.923	ENSCHOG00000011055	BMS1	87	66.934	Choloepus_hoffmanni
ENSHBUG00000022628	bms1	98	66.041	ENSCPBG00000025581	BMS1	86	69.293	Chrysemys_picta_bellii
ENSHBUG00000022628	bms1	84	62.657	ENSCING00000003181	-	95	63.947	Ciona_intestinalis
ENSHBUG00000022628	bms1	55	71.255	ENSCSAVG00000004113	-	88	53.103	Ciona_savignyi
ENSHBUG00000022628	bms1	99	62.597	ENSCANG00000011609	BMS1	87	68.413	Colobus_angolensis_palliatus
ENSHBUG00000022628	bms1	98	62.696	ENSCGRG00001019461	Bms1	93	67.515	Cricetulus_griseus_chok1gshd
ENSHBUG00000022628	bms1	98	62.696	ENSCGRG00000009016	Bms1	93	67.515	Cricetulus_griseus_crigri
ENSHBUG00000022628	bms1	100	75.080	ENSCSEG00000002469	bms1	100	75.020	Cynoglossus_semilaevis
ENSHBUG00000022628	bms1	100	79.402	ENSCVAG00000008371	bms1	100	79.734	Cyprinodon_variegatus
ENSHBUG00000022628	bms1	99	72.146	ENSDARG00000054154	bms1	99	72.114	Danio_rerio
ENSHBUG00000022628	bms1	55	65.554	ENSDNOG00000015761	BMS1	86	67.576	Dasypus_novemcinctus
ENSHBUG00000022628	bms1	95	68.750	ENSDORG00000002982	Bms1	87	68.590	Dipodomys_ordii
ENSHBUG00000022628	bms1	88	61.501	FBgn0036686	CG7728	96	63.904	Drosophila_melanogaster
ENSHBUG00000022628	bms1	84	67.857	ENSETEG00000009554	BMS1	77	67.857	Echinops_telfairi
ENSHBUG00000022628	bms1	99	61.728	ENSEASG00005006894	BMS1	97	61.466	Equus_asinus_asinus
ENSHBUG00000022628	bms1	99	62.327	ENSECAG00000001358	BMS1	87	68.539	Equus_caballus
ENSHBUG00000022628	bms1	100	72.632	ENSELUG00000001756	bms1	99	73.537	Esox_lucius
ENSHBUG00000022628	bms1	99	61.960	ENSFCAG00000011220	BMS1	87	68.269	Felis_catus
ENSHBUG00000022628	bms1	99	64.834	ENSFALG00000006882	BMS1	85	69.231	Ficedula_albicollis
ENSHBUG00000022628	bms1	99	66.357	ENSFDAG00000001422	BMS1	92	66.406	Fukomys_damarensis
ENSHBUG00000022628	bms1	100	80.565	ENSFHEG00000003367	bms1	100	79.684	Fundulus_heteroclitus
ENSHBUG00000022628	bms1	99	71.236	ENSGMOG00000000718	bms1	99	70.148	Gadus_morhua
ENSHBUG00000022628	bms1	99	64.971	ENSGALG00000002624	BMS1	86	68.910	Gallus_gallus
ENSHBUG00000022628	bms1	99	80.128	ENSGACG00000015334	bms1	89	80.128	Gasterosteus_aculeatus
ENSHBUG00000022628	bms1	98	64.663	ENSGAGG00000003467	BMS1	93	68.211	Gopherus_agassizii
ENSHBUG00000022628	bms1	99	62.227	ENSHGLG00000000477	BMS1	88	67.949	Heterocephalus_glaber_female
ENSHBUG00000022628	bms1	99	62.227	ENSHGLG00100002176	BMS1	88	67.949	Heterocephalus_glaber_male
ENSHBUG00000022628	bms1	99	78.122	ENSHCOG00000017604	bms1	99	77.965	Hippocampus_comes
ENSHBUG00000022628	bms1	99	70.588	ENSIPUG00000017855	bms1	99	70.409	Ictalurus_punctatus
ENSHBUG00000022628	bms1	99	61.920	ENSSTOG00000015063	BMS1	88	67.773	Ictidomys_tridecemlineatus
ENSHBUG00000022628	bms1	54	66.309	ENSJJAG00000017328	Bms1	88	66.667	Jaculus_jaculus
ENSHBUG00000022628	bms1	65	76.154	ENSKMAG00000021982	bms1	97	75.353	Kryptolebias_marmoratus
ENSHBUG00000022628	bms1	100	77.576	ENSLBEG00000028208	bms1	100	78.043	Labrus_bergylta
ENSHBUG00000022628	bms1	54	57.207	ENSLACG00000001600	BMS1	87	65.854	Latimeria_chalumnae
ENSHBUG00000022628	bms1	97	70.691	ENSLOCG00000012914	bms1	97	71.512	Lepisosteus_oculatus
ENSHBUG00000022628	bms1	99	66.792	ENSLAFG00000006250	BMS1	87	67.251	Loxodonta_africana
ENSHBUG00000022628	bms1	88	66.859	ENSMFAG00000037771	BMS1	96	67.262	Macaca_fascicularis
ENSHBUG00000022628	bms1	87	62.338	ENSMMUG00000007426	-	85	62.863	Macaca_mulatta
ENSHBUG00000022628	bms1	82	54.280	ENSMLEG00000029084	-	77	57.326	Mandrillus_leucophaeus
ENSHBUG00000022628	bms1	100	80.941	ENSMAMG00000020855	bms1	100	79.570	Mastacembelus_armatus
ENSHBUG00000022628	bms1	100	99.583	ENSMZEG00005005663	bms1	100	99.583	Maylandia_zebra
ENSHBUG00000022628	bms1	90	69.502	ENSMGAG00000001170	BMS1	87	69.071	Meleagris_gallopavo
ENSHBUG00000022628	bms1	98	62.774	ENSMAUG00000002195	Bms1	89	66.930	Mesocricetus_auratus
ENSHBUG00000022628	bms1	99	66.309	ENSMICG00000009977	BMS1	87	67.520	Microcebus_murinus
ENSHBUG00000022628	bms1	98	65.067	ENSMOCG00000002038	Bms1	87	67.308	Microtus_ochrogaster
ENSHBUG00000022628	bms1	100	79.087	ENSMMOG00000000977	bms1	100	77.159	Mola_mola
ENSHBUG00000022628	bms1	99	61.937	ENSMODG00000001177	BMS1	86	70.096	Monodelphis_domestica
ENSHBUG00000022628	bms1	100	81.059	ENSMALG00000009680	bms1	100	81.177	Monopterus_albus
ENSHBUG00000022628	bms1	68	80.342	MGP_CAROLIEiJ_G0028785	-	74	78.571	Mus_caroli
ENSHBUG00000022628	bms1	59	57.179	ENSMUSG00000030138	Bms1	87	66.409	Mus_musculus
ENSHBUG00000022628	bms1	98	61.544	MGP_PahariEiJ_G0022539	Bms1	92	66.863	Mus_pahari
ENSHBUG00000022628	bms1	98	60.955	MGP_SPRETEiJ_G0029816	Bms1	87	66.190	Mus_spretus
ENSHBUG00000022628	bms1	99	62.568	ENSMPUG00000017276	BMS1	87	67.886	Mustela_putorius_furo
ENSHBUG00000022628	bms1	99	61.908	ENSMLUG00000003260	BMS1	87	67.524	Myotis_lucifugus
ENSHBUG00000022628	bms1	99	57.177	ENSNGAG00000015258	Bms1	97	57.012	Nannospalax_galili
ENSHBUG00000022628	bms1	99	60.651	ENSNLEG00000015791	BMS1	87	66.992	Nomascus_leucogenys
ENSHBUG00000022628	bms1	85	77.833	ENSOPRG00000005195	BMS1	77	80.000	Ochotona_princeps
ENSHBUG00000022628	bms1	99	65.794	ENSODEG00000005554	BMS1	93	66.406	Octodon_degus
ENSHBUG00000022628	bms1	100	96.758	ENSONIG00000007227	bms1	100	96.758	Oreochromis_niloticus
ENSHBUG00000022628	bms1	99	60.046	ENSOANG00000000662	-	87	67.147	Ornithorhynchus_anatinus
ENSHBUG00000022628	bms1	95	68.910	ENSOCUG00000005354	BMS1	86	68.910	Oryctolagus_cuniculus
ENSHBUG00000022628	bms1	99	79.351	ENSORLG00000014655	bms1	99	79.483	Oryzias_latipes
ENSHBUG00000022628	bms1	52	80.868	ENSORLG00020016246	bms1	99	76.036	Oryzias_latipes_hni
ENSHBUG00000022628	bms1	52	81.029	ENSORLG00015014183	bms1	99	76.447	Oryzias_latipes_hsok
ENSHBUG00000022628	bms1	99	79.950	ENSOMEG00000015042	bms1	99	79.917	Oryzias_melastigma
ENSHBUG00000022628	bms1	98	66.729	ENSOGAG00000006511	BMS1	86	68.262	Otolemur_garnettii
ENSHBUG00000022628	bms1	54	67.079	ENSOARG00000003900	BMS1	86	68.700	Ovis_aries
ENSHBUG00000022628	bms1	99	58.623	ENSPPAG00000027837	BMS1	87	67.773	Pan_paniscus
ENSHBUG00000022628	bms1	99	61.894	ENSPPRG00000001311	BMS1	87	68.269	Panthera_pardus
ENSHBUG00000022628	bms1	99	61.004	ENSPTIG00000009652	BMS1	86	67.123	Panthera_tigris_altaica
ENSHBUG00000022628	bms1	99	61.533	ENSPTRG00000002441	BMS1	87	68.730	Pan_troglodytes
ENSHBUG00000022628	bms1	97	75.879	ENSPKIG00000008165	bms1	90	77.476	Paramormyrops_kingsleyae
ENSHBUG00000022628	bms1	95	67.296	ENSPSIG00000006481	BMS1	86	68.438	Pelodiscus_sinensis
ENSHBUG00000022628	bms1	98	56.464	ENSPEMG00000022467	Bms1	87	66.929	Peromyscus_maniculatus_bairdii
ENSHBUG00000022628	bms1	96	69.231	ENSPCIG00000001339	BMS1	85	74.648	Phascolarctos_cinereus
ENSHBUG00000022628	bms1	97	81.350	ENSPFOG00000015180	bms1	99	77.612	Poecilia_formosa
ENSHBUG00000022628	bms1	99	78.500	ENSPMEG00000023176	bms1	94	78.904	Poecilia_mexicana
ENSHBUG00000022628	bms1	99	78.750	ENSPREG00000002695	bms1	99	79.035	Poecilia_reticulata
ENSHBUG00000022628	bms1	57	55.682	ENSPPYG00000002836	-	79	68.164	Pongo_abelii
ENSHBUG00000022628	bms1	72	76.190	ENSPCAG00000014528	BMS1	70	76.190	Procavia_capensis
ENSHBUG00000022628	bms1	93	67.089	ENSPCOG00000023834	-	88	65.854	Propithecus_coquereli
ENSHBUG00000022628	bms1	99	61.868	ENSPVAG00000000725	BMS1	88	67.788	Pteropus_vampyrus
ENSHBUG00000022628	bms1	100	95.908	ENSPNYG00000018866	bms1	97	98.964	Pundamilia_nyererei
ENSHBUG00000022628	bms1	54	76.324	ENSPNAG00000000676	bms1	97	70.816	Pygocentrus_nattereri
ENSHBUG00000022628	bms1	80	60.874	ENSRNOG00000006576	Bms1	85	68.010	Rattus_norvegicus
ENSHBUG00000022628	bms1	99	60.789	ENSRROG00000040101	BMS1	85	70.297	Rhinopithecus_roxellana
ENSHBUG00000022628	bms1	80	45.703	YPL217C	-	73	55.301	Saccharomyces_cerevisiae
ENSHBUG00000022628	bms1	97	68.740	ENSSBOG00000035778	BMS1	88	68.262	Saimiri_boliviensis_boliviensis
ENSHBUG00000022628	bms1	99	64.253	ENSSHAG00000005062	BMS1	87	68.153	Sarcophilus_harrisii
ENSHBUG00000022628	bms1	53	75.969	ENSSFOG00015022313	bms1	99	69.780	Scleropages_formosus
ENSHBUG00000022628	bms1	100	78.548	ENSSMAG00000019966	bms1	100	78.871	Scophthalmus_maximus
ENSHBUG00000022628	bms1	100	81.220	ENSSDUG00000016875	bms1	100	81.138	Seriola_dumerili
ENSHBUG00000022628	bms1	100	80.663	ENSSLDG00000015199	bms1	100	81.472	Seriola_lalandi_dorsalis
ENSHBUG00000022628	bms1	53	73.000	ENSSARG00000014407	BMS1	66	73.000	Sorex_araneus
ENSHBUG00000022628	bms1	99	68.489	ENSSPUG00000014454	BMS1	86	68.710	Sphenodon_punctatus
ENSHBUG00000022628	bms1	99	62.085	ENSSSCG00000010198	BMS1	86	68.612	Sus_scrofa
ENSHBUG00000022628	bms1	95	69.887	ENSTGUG00000006302	-	85	69.231	Taeniopygia_guttata
ENSHBUG00000022628	bms1	99	70.868	ENSTRUG00000008028	bms1	99	70.691	Takifugu_rubripes
ENSHBUG00000022628	bms1	99	73.194	ENSTNIG00000006216	bms1	89	74.318	Tetraodon_nigroviridis
ENSHBUG00000022628	bms1	65	71.333	ENSTBEG00000001673	-	63	70.707	Tupaia_belangeri
ENSHBUG00000022628	bms1	99	61.556	ENSTTRG00000007983	BMS1	86	68.218	Tursiops_truncatus
ENSHBUG00000022628	bms1	99	62.286	ENSUAMG00000023996	BMS1	87	68.379	Ursus_americanus
ENSHBUG00000022628	bms1	99	62.131	ENSUMAG00000016523	BMS1	87	67.836	Ursus_maritimus
ENSHBUG00000022628	bms1	82	71.789	ENSVPAG00000007477	BMS1	81	73.203	Vicugna_pacos
ENSHBUG00000022628	bms1	98	68.242	ENSVVUG00000021305	BMS1	89	67.710	Vulpes_vulpes
ENSHBUG00000022628	bms1	98	61.874	ENSXETG00000008158	bms1	99	62.169	Xenopus_tropicalis
ENSHBUG00000022628	bms1	99	76.003	ENSXCOG00000000506	bms1	95	87.010	Xiphophorus_couchianus
ENSHBUG00000022628	bms1	99	77.852	ENSXMAG00000014236	bms1	99	78.018	Xiphophorus_maculatus