EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000022878 (Gene tree)
Gene ID: 102306514
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3007 bases
Position: chrJH425435.1:641226-644232
Accession: 102306514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000020605	zf-C2H2	PF00096.26	7e-13	1	2
ENSHBUP00000020605	zf-C2H2	PF00096.26	7e-13	2	2
ENSHBUP00000020605	zf-met	PF12874.7	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000030260	-	1119	XM_005930094	ENSHBUP00000020605	372 (aa)	XP_005930156	-

Gene Model

Click here to download ENSHBUG00000022878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000022878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000022878	prdm12b	50	39.506	ENSHBUG00000006656	-	52	39.506
ENSHBUG00000022878	prdm12b	100	76.692	ENSHBUG00000022537	-	93	77.694
ENSHBUG00000022878	prdm12b	66	37.358	ENSHBUG00000019660	prdm14	55	41.667
ENSHBUG00000022878	prdm12b	68	41.176	ENSHBUG00000023375	prdm5	96	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000022878	prdm12b	93	80.980	ENSG00000130711	PRDM12	99	75.789	Homo_sapiens
ENSHBUG00000022878	prdm12b	100	90.885	ENSAPOG00000016051	prdm12b	100	91.406	Acanthochromis_polyacanthus
ENSHBUG00000022878	prdm12b	100	68.085	ENSAPOG00000018234	-	100	68.085	Acanthochromis_polyacanthus
ENSHBUG00000022878	prdm12b	90	81.493	ENSAMEG00000016234	PRDM12	99	81.493	Ailuropoda_melanoleuca
ENSHBUG00000022878	prdm12b	100	79.434	ENSACIG00000005193	-	100	79.897	Amphilophus_citrinellus
ENSHBUG00000022878	prdm12b	100	94.400	ENSACIG00000019578	prdm12b	100	95.200	Amphilophus_citrinellus
ENSHBUG00000022878	prdm12b	100	91.512	ENSAOCG00000015040	prdm12b	100	93.634	Amphiprion_ocellaris
ENSHBUG00000022878	prdm12b	100	73.214	ENSAPEG00000022849	-	99	74.490	Amphiprion_percula
ENSHBUG00000022878	prdm12b	100	91.467	ENSAPEG00000015092	prdm12b	100	92.267	Amphiprion_percula
ENSHBUG00000022878	prdm12b	100	80.928	ENSATEG00000014595	-	100	81.443	Anabas_testudineus
ENSHBUG00000022878	prdm12b	94	80.453	ENSANAG00000020616	PRDM12	99	79.603	Aotus_nancymaae
ENSHBUG00000022878	prdm12b	100	93.011	ENSACLG00000011876	prdm12b	100	93.011	Astatotilapia_calliptera
ENSHBUG00000022878	prdm12b	100	76.692	ENSACLG00000007631	-	100	77.694	Astatotilapia_calliptera
ENSHBUG00000022878	prdm12b	100	80.533	ENSAMXG00000008540	PRDM12	100	80.533	Astyanax_mexicanus
ENSHBUG00000022878	prdm12b	100	82.322	ENSAMXG00000033665	prdm12b	100	82.586	Astyanax_mexicanus
ENSHBUG00000022878	prdm12b	93	80.692	ENSBTAG00000023797	PRDM12	99	77.005	Bos_taurus
ENSHBUG00000022878	prdm12b	93	81.268	ENSCJAG00000020540	PRDM12	99	76.455	Callithrix_jacchus
ENSHBUG00000022878	prdm12b	81	80.656	ENSCAFG00000023076	PRDM12	99	76.190	Canis_familiaris
ENSHBUG00000022878	prdm12b	93	80.692	ENSCAFG00020024046	PRDM12	99	76.720	Canis_lupus_dingo
ENSHBUG00000022878	prdm12b	93	80.692	ENSCHIG00000025005	PRDM12	99	77.067	Capra_hircus
ENSHBUG00000022878	prdm12b	87	80.982	ENSCPOG00000005901	PRDM12	95	80.982	Cavia_porcellus
ENSHBUG00000022878	prdm12b	93	81.268	ENSCCAG00000037485	PRDM12	99	76.455	Cebus_capucinus
ENSHBUG00000022878	prdm12b	93	81.268	ENSCATG00000020327	PRDM12	99	76.455	Cercocebus_atys
ENSHBUG00000022878	prdm12b	91	80.994	ENSCLAG00000005499	PRDM12	90	80.994	Chinchilla_lanigera
ENSHBUG00000022878	prdm12b	93	81.268	ENSCSAG00000014756	PRDM12	99	76.455	Chlorocebus_sabaeus
ENSHBUG00000022878	prdm12b	100	78.342	ENSCPBG00000022628	PRDM12	99	78.342	Chrysemys_picta_bellii
ENSHBUG00000022878	prdm12b	93	80.692	ENSCGRG00001015005	Prdm12	99	76.517	Cricetulus_griseus_chok1gshd
ENSHBUG00000022878	prdm12b	100	87.668	ENSCVAG00000017166	prdm12b	100	91.223	Cyprinodon_variegatus
ENSHBUG00000022878	prdm12b	100	77.949	ENSCVAG00000000944	-	100	78.626	Cyprinodon_variegatus
ENSHBUG00000022878	prdm12b	100	83.777	ENSDARG00000007430	prdm12b	100	83.777	Danio_rerio
ENSHBUG00000022878	prdm12b	92	80.172	ENSDNOG00000042302	PRDM12	99	76.533	Dasypus_novemcinctus
ENSHBUG00000022878	prdm12b	93	62.334	ENSEBUG00000016780	prdm12b	83	62.599	Eptatretus_burgeri
ENSHBUG00000022878	prdm12b	94	79.603	ENSEASG00005008472	PRDM12	99	76.720	Equus_asinus_asinus
ENSHBUG00000022878	prdm12b	94	79.320	ENSECAG00000005933	PRDM12	99	76.455	Equus_caballus
ENSHBUG00000022878	prdm12b	100	82.804	ENSELUG00000013674	PRDM12	100	84.656	Esox_lucius
ENSHBUG00000022878	prdm12b	100	82.804	ENSELUG00000009905	prdm12b	100	81.746	Esox_lucius
ENSHBUG00000022878	prdm12b	93	80.692	ENSFCAG00000043086	PRDM12	99	76.720	Felis_catus
ENSHBUG00000022878	prdm12b	100	79.679	ENSFALG00000001445	PRDM12	89	79.679	Ficedula_albicollis
ENSHBUG00000022878	prdm12b	100	87.798	ENSFHEG00000003944	prdm12b	100	91.247	Fundulus_heteroclitus
ENSHBUG00000022878	prdm12b	100	76.441	ENSFHEG00000007746	-	100	75.940	Fundulus_heteroclitus
ENSHBUG00000022878	prdm12b	100	82.461	ENSGMOG00000011797	prdm12b	100	83.246	Gadus_morhua
ENSHBUG00000022878	prdm12b	100	79.679	ENSGALG00000003895	PRDM12	99	79.679	Gallus_gallus
ENSHBUG00000022878	prdm12b	100	89.446	ENSGAFG00000010827	prdm12b	99	88.391	Gambusia_affinis
ENSHBUG00000022878	prdm12b	100	90.186	ENSGACG00000016713	prdm12b	99	88.859	Gasterosteus_aculeatus
ENSHBUG00000022878	prdm12b	100	78.610	ENSGAGG00000014083	PRDM12	99	78.610	Gopherus_agassizii
ENSHBUG00000022878	prdm12b	93	80.692	ENSGGOG00000010568	PRDM12	99	75.726	Gorilla_gorilla
ENSHBUG00000022878	prdm12b	91	80.994	ENSHGLG00000013939	PRDM12	99	75.926	Heterocephalus_glaber_female
ENSHBUG00000022878	prdm12b	100	72.944	ENSHCOG00000021167	-	100	72.944	Hippocampus_comes
ENSHBUG00000022878	prdm12b	90	85.797	ENSHCOG00000003663	prdm12b	100	80.759	Hippocampus_comes
ENSHBUG00000022878	prdm12b	100	83.554	ENSIPUG00000017053	prdm12b	100	83.554	Ictalurus_punctatus
ENSHBUG00000022878	prdm12b	100	78.495	ENSIPUG00000019544	PRDM12	100	77.688	Ictalurus_punctatus
ENSHBUG00000022878	prdm12b	99	77.089	ENSSTOG00000005986	PRDM12	93	77.089	Ictidomys_tridecemlineatus
ENSHBUG00000022878	prdm12b	91	81.287	ENSJJAG00000005424	Prdm12	99	81.287	Jaculus_jaculus
ENSHBUG00000022878	prdm12b	94	79.545	ENSKMAG00000021205	-	94	78.933	Kryptolebias_marmoratus
ENSHBUG00000022878	prdm12b	100	82.266	ENSKMAG00000016921	prdm12b	100	82.759	Kryptolebias_marmoratus
ENSHBUG00000022878	prdm12b	100	79.319	ENSLBEG00000007776	-	100	79.843	Labrus_bergylta
ENSHBUG00000022878	prdm12b	100	87.990	ENSLBEG00000017769	prdm12b	100	88.773	Labrus_bergylta
ENSHBUG00000022878	prdm12b	100	78.877	ENSLACG00000017560	PRDM12	99	78.877	Latimeria_chalumnae
ENSHBUG00000022878	prdm12b	100	84.043	ENSLOCG00000005429	prdm12b	100	83.770	Lepisosteus_oculatus
ENSHBUG00000022878	prdm12b	93	82.029	ENSLAFG00000006979	PRDM12	92	78.552	Loxodonta_africana
ENSHBUG00000022878	prdm12b	100	76.053	ENSMFAG00000040322	PRDM12	99	75.789	Macaca_fascicularis
ENSHBUG00000022878	prdm12b	93	81.268	ENSMNEG00000037234	PRDM12	99	76.455	Macaca_nemestrina
ENSHBUG00000022878	prdm12b	100	92.042	ENSMAMG00000013212	prdm12b	100	92.042	Mastacembelus_armatus
ENSHBUG00000022878	prdm12b	100	74.436	ENSMAMG00000018988	-	100	75.188	Mastacembelus_armatus
ENSHBUG00000022878	prdm12b	100	76.309	ENSMZEG00005000415	PRDM12	100	77.057	Maylandia_zebra
ENSHBUG00000022878	prdm12b	98	79.348	ENSMGAG00000005438	PRDM12	98	79.348	Meleagris_gallopavo
ENSHBUG00000022878	prdm12b	100	76.455	ENSMAUG00000013040	Prdm12	99	76.455	Mesocricetus_auratus
ENSHBUG00000022878	prdm12b	94	80.057	ENSMICG00000015480	PRDM12	99	76.800	Microcebus_murinus
ENSHBUG00000022878	prdm12b	100	77.807	ENSMOCG00000021026	Prdm12	93	80.170	Microtus_ochrogaster
ENSHBUG00000022878	prdm12b	100	78.933	ENSMODG00000012108	PRDM12	99	78.933	Monodelphis_domestica
ENSHBUG00000022878	prdm12b	100	75.862	ENSMALG00000021901	prdm12b	99	74.801	Monopterus_albus
ENSHBUG00000022878	prdm12b	93	80.403	MGP_CAROLIEiJ_G0023414	Prdm12	99	76.455	Mus_caroli
ENSHBUG00000022878	prdm12b	93	80.403	ENSMUSG00000079466	Prdm12	99	76.455	Mus_musculus
ENSHBUG00000022878	prdm12b	93	80.403	MGP_PahariEiJ_G0024871	Prdm12	99	76.455	Mus_pahari
ENSHBUG00000022878	prdm12b	93	80.403	MGP_SPRETEiJ_G0024331	Prdm12	99	76.455	Mus_spretus
ENSHBUG00000022878	prdm12b	90	81.953	ENSNGAG00000018480	Prdm12	99	76.738	Nannospalax_galili
ENSHBUG00000022878	prdm12b	100	98.933	ENSNBRG00000006727	prdm12b	100	98.933	Neolamprologus_brichardi
ENSHBUG00000022878	prdm12b	100	73.684	ENSNBRG00000024312	-	100	74.211	Neolamprologus_brichardi
ENSHBUG00000022878	prdm12b	100	71.467	ENSMEUG00000003828	PRDM12	99	71.467	Notamacropus_eugenii
ENSHBUG00000022878	prdm12b	91	81.287	ENSOPRG00000008680	PRDM12	99	81.287	Ochotona_princeps
ENSHBUG00000022878	prdm12b	94	79.320	ENSODEG00000016282	PRDM12	64	79.320	Octodon_degus
ENSHBUG00000022878	prdm12b	63	76.695	ENSOANG00000001043	PRDM12	100	76.695	Ornithorhynchus_anatinus
ENSHBUG00000022878	prdm12b	84	80.511	ENSOCUG00000008241	PRDM12	96	80.511	Oryctolagus_cuniculus
ENSHBUG00000022878	prdm12b	100	78.261	ENSORLG00000017558	-	100	79.284	Oryzias_latipes
ENSHBUG00000022878	prdm12b	100	87.863	ENSORLG00000007114	prdm12b	99	88.654	Oryzias_latipes
ENSHBUG00000022878	prdm12b	100	86.352	ENSORLG00020019565	prdm12b	99	88.189	Oryzias_latipes_hni
ENSHBUG00000022878	prdm12b	100	78.517	ENSORLG00020013167	-	100	79.284	Oryzias_latipes_hni
ENSHBUG00000022878	prdm12b	100	87.831	ENSORLG00015007621	prdm12b	99	88.889	Oryzias_latipes_hsok
ENSHBUG00000022878	prdm12b	100	78.005	ENSORLG00015003435	-	100	79.028	Oryzias_latipes_hsok
ENSHBUG00000022878	prdm12b	100	79.896	ENSOMEG00000007762	-	100	79.373	Oryzias_melastigma
ENSHBUG00000022878	prdm12b	100	88.743	ENSOMEG00000004134	prdm12b	99	88.482	Oryzias_melastigma
ENSHBUG00000022878	prdm12b	92	80.870	ENSOGAG00000007557	PRDM12	99	80.870	Otolemur_garnettii
ENSHBUG00000022878	prdm12b	80	80.333	ENSPPAG00000031506	-	97	79.333	Pan_paniscus
ENSHBUG00000022878	prdm12b	100	71.467	ENSPPRG00000023024	PRDM12	92	71.467	Panthera_pardus
ENSHBUG00000022878	prdm12b	93	80.980	ENSPTRG00000043324	-	99	75.989	Pan_troglodytes
ENSHBUG00000022878	prdm12b	93	80.980	ENSPTRG00000021475	PRDM12	99	75.989	Pan_troglodytes
ENSHBUG00000022878	prdm12b	93	81.268	ENSPANG00000025967	PRDM12	99	76.455	Papio_anubis
ENSHBUG00000022878	prdm12b	90	79.941	ENSPKIG00000004305	PRDM12	94	81.548	Paramormyrops_kingsleyae
ENSHBUG00000022878	prdm12b	100	84.840	ENSPKIG00000007228	prdm12b	100	84.840	Paramormyrops_kingsleyae
ENSHBUG00000022878	prdm12b	100	78.610	ENSPSIG00000006739	PRDM12	99	78.610	Pelodiscus_sinensis
ENSHBUG00000022878	prdm12b	100	75.318	ENSPMGG00000002356	-	100	74.874	Periophthalmus_magnuspinnatus
ENSHBUG00000022878	prdm12b	100	89.037	ENSPMGG00000008867	prdm12b	99	89.037	Periophthalmus_magnuspinnatus
ENSHBUG00000022878	prdm12b	91	82.164	ENSPEMG00000009969	Prdm12	91	80.870	Peromyscus_maniculatus_bairdii
ENSHBUG00000022878	prdm12b	100	78.933	ENSPCIG00000024119	PRDM12	99	78.933	Phascolarctos_cinereus
ENSHBUG00000022878	prdm12b	100	89.920	ENSPFOG00000019841	prdm12b	100	89.655	Poecilia_formosa
ENSHBUG00000022878	prdm12b	100	88.220	ENSPLAG00000016626	prdm12b	99	87.958	Poecilia_latipinna
ENSHBUG00000022878	prdm12b	96	88.587	ENSPMEG00000016698	prdm12b	99	87.772	Poecilia_mexicana
ENSHBUG00000022878	prdm12b	100	87.990	ENSPREG00000015073	prdm12b	99	87.467	Poecilia_reticulata
ENSHBUG00000022878	prdm12b	95	74.931	ENSPREG00000003211	-	94	74.931	Poecilia_reticulata
ENSHBUG00000022878	prdm12b	96	79.666	ENSPPYG00000019694	PRDM12	98	78.830	Pongo_abelii
ENSHBUG00000022878	prdm12b	93	80.692	ENSPCOG00000022255	PRDM12	99	76.517	Propithecus_coquereli
ENSHBUG00000022878	prdm12b	93	80.403	ENSPVAG00000001511	PRDM12	99	76.253	Pteropus_vampyrus
ENSHBUG00000022878	prdm12b	100	76.309	ENSPNYG00000013589	-	100	77.057	Pundamilia_nyererei
ENSHBUG00000022878	prdm12b	100	99.198	ENSPNYG00000009607	prdm12b	100	99.198	Pundamilia_nyererei
ENSHBUG00000022878	prdm12b	100	83.554	ENSPNAG00000024532	prdm12b	100	83.820	Pygocentrus_nattereri
ENSHBUG00000022878	prdm12b	100	79.265	ENSPNAG00000013396	PRDM12	100	78.740	Pygocentrus_nattereri
ENSHBUG00000022878	prdm12b	93	80.403	ENSRNOG00000009218	Prdm12	99	76.455	Rattus_norvegicus
ENSHBUG00000022878	prdm12b	88	82.424	ENSRBIG00000042712	PRDM12	98	75.946	Rhinopithecus_bieti
ENSHBUG00000022878	prdm12b	89	82.635	ENSRROG00000043554	PRDM12	99	81.737	Rhinopithecus_roxellana
ENSHBUG00000022878	prdm12b	100	78.457	ENSSHAG00000015972	PRDM12	99	78.457	Sarcophilus_harrisii
ENSHBUG00000022878	prdm12b	100	87.404	ENSSMAG00000003754	prdm12b	100	87.404	Scophthalmus_maximus
ENSHBUG00000022878	prdm12b	100	80.311	ENSSDUG00000019071	-	100	81.347	Seriola_dumerili
ENSHBUG00000022878	prdm12b	100	91.601	ENSSDUG00000023498	prdm12b	100	91.601	Seriola_dumerili
ENSHBUG00000022878	prdm12b	100	78.075	ENSSLDG00000013562	-	100	77.807	Seriola_lalandi_dorsalis
ENSHBUG00000022878	prdm12b	100	90.551	ENSSLDG00000009557	prdm12b	100	92.126	Seriola_lalandi_dorsalis
ENSHBUG00000022878	prdm12b	100	79.144	ENSSPUG00000013424	PRDM12	99	79.144	Sphenodon_punctatus
ENSHBUG00000022878	prdm12b	100	73.575	ENSSPAG00000022420	-	100	75.130	Stegastes_partitus
ENSHBUG00000022878	prdm12b	100	91.799	ENSSPAG00000018824	prdm12b	100	92.857	Stegastes_partitus
ENSHBUG00000022878	prdm12b	93	80.692	ENSSSCG00000005703	PRDM12	99	76.720	Sus_scrofa
ENSHBUG00000022878	prdm12b	100	78.133	ENSTRUG00000013239	-	100	78.133	Takifugu_rubripes
ENSHBUG00000022878	prdm12b	100	89.572	ENSTRUG00000018659	prdm12b	100	88.235	Takifugu_rubripes
ENSHBUG00000022878	prdm12b	100	88.503	ENSTNIG00000009020	prdm12b	99	87.166	Tetraodon_nigroviridis
ENSHBUG00000022878	prdm12b	100	75.733	ENSTNIG00000005859	-	99	75.733	Tetraodon_nigroviridis
ENSHBUG00000022878	prdm12b	93	80.692	ENSUAMG00000009653	PRDM12	94	79.603	Ursus_americanus
ENSHBUG00000022878	prdm12b	92	80.870	ENSVVUG00000027662	PRDM12	79	80.870	Vulpes_vulpes
ENSHBUG00000022878	prdm12b	100	89.655	ENSXCOG00000002836	prdm12b	99	89.390	Xiphophorus_couchianus
ENSHBUG00000022878	prdm12b	100	88.947	ENSXMAG00000005537	prdm12b	100	90.000	Xiphophorus_maculatus
ENSHBUG00000022878	prdm12b	100	76.119	ENSXMAG00000028012	-	100	76.296	Xiphophorus_maculatus