EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000023098 (Gene tree)
Gene ID: 102306604
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 124592 bases
Position: chrJH425940.1:53659-178250
Accession: 102306604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000020808	Fox-1_C	PF12414.8	5e-44	1	1
ENSHBUP00000020815	RRM_1	PF00076.22	1.2e-18	1	1
ENSHBUP00000020808	RRM_1	PF00076.22	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000036106	-	5504	XM_005948440	ENSHBUP00000020815	291 (aa)	XP_005948502	-
ENSHBUT00000030527	-	3941	XM_005948439	ENSHBUP00000020808	348 (aa)	XP_005948501	-

Gene Model

Click here to download ENSHBUG00000023098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000023098	-	67	69.112	ENSHBUG00000004356	rbfox2	82	55.759
ENSHBUG00000023098	-	90	53.276	ENSHBUG00000000856	-	82	55.376
ENSHBUG00000023098	-	99	82.659	ENSHBUG00000018099	rbfox3b	90	81.792
ENSHBUG00000023098	-	67	72.083	ENSHBUG00000013406	rbfox1l	88	57.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023098	-	86	81.063	ENSG00000167281	RBFOX3	99	89.333	Homo_sapiens
ENSHBUG00000023098	-	97	71.307	ENSAPOG00000015658	-	86	74.622	Acanthochromis_polyacanthus
ENSHBUG00000023098	-	99	82.370	ENSAPOG00000021630	rbfox3b	90	81.503	Acanthochromis_polyacanthus
ENSHBUG00000023098	-	99	70.483	ENSAMEG00000014170	RBFOX3	99	69.873	Ailuropoda_melanoleuca
ENSHBUG00000023098	-	89	83.742	ENSACIG00000003768	-	90	83.742	Amphilophus_citrinellus
ENSHBUG00000023098	-	91	78.864	ENSACIG00000010817	rbfox3b	100	77.918	Amphilophus_citrinellus
ENSHBUG00000023098	-	95	81.928	ENSAOCG00000012358	rbfox3b	90	81.024	Amphiprion_ocellaris
ENSHBUG00000023098	-	95	88.146	ENSAOCG00000010786	-	87	88.146	Amphiprion_ocellaris
ENSHBUG00000023098	-	95	82.153	ENSAPEG00000015891	-	87	82.153	Amphiprion_percula
ENSHBUG00000023098	-	95	73.860	ENSAPEG00000019081	rbfox3b	88	72.644	Amphiprion_percula
ENSHBUG00000023098	-	87	84.488	ENSATEG00000023101	-	97	84.591	Anabas_testudineus
ENSHBUG00000023098	-	91	73.487	ENSATEG00000019945	rbfox3b	100	74.352	Anabas_testudineus
ENSHBUG00000023098	-	96	78.806	ENSACAG00000016093	RBFOX3	92	78.507	Anolis_carolinensis
ENSHBUG00000023098	-	86	79.734	ENSANAG00000023457	RBFOX3	100	79.114	Aotus_nancymaae
ENSHBUG00000023098	-	94	99.693	ENSACLG00000025552	-	89	99.693	Astatotilapia_calliptera
ENSHBUG00000023098	-	99	82.659	ENSACLG00000020011	rbfox3b	100	82.166	Astatotilapia_calliptera
ENSHBUG00000023098	-	96	82.596	ENSAMXG00000037246	rbfox3a	98	83.891	Astyanax_mexicanus
ENSHBUG00000023098	-	94	79.573	ENSAMXG00000042841	rbfox3b	93	78.593	Astyanax_mexicanus
ENSHBUG00000023098	-	73	80.392	ENSBTAG00000006280	RBFOX3	100	58.245	Bos_taurus
ENSHBUG00000023098	-	86	69.868	ENSCJAG00000009563	RBFOX3	100	69.421	Callithrix_jacchus
ENSHBUG00000023098	-	69	88.797	ENSCAFG00000005547	RBFOX3	99	79.004	Canis_familiaris
ENSHBUG00000023098	-	90	70.442	ENSCAFG00020008126	RBFOX3	100	70.292	Canis_lupus_dingo
ENSHBUG00000023098	-	90	69.613	ENSCHIG00000009124	RBFOX3	100	70.292	Capra_hircus
ENSHBUG00000023098	-	86	69.828	ENSTSYG00000029617	RBFOX3	100	71.074	Carlito_syrichta
ENSHBUG00000023098	-	53	72.611	ENSCAPG00000010217	RBFOX3	100	73.256	Cavia_aperea
ENSHBUG00000023098	-	90	69.231	ENSCPOG00000021703	RBFOX3	100	69.921	Cavia_porcellus
ENSHBUG00000023098	-	86	79.734	ENSCCAG00000028450	RBFOX3	100	79.114	Cebus_capucinus
ENSHBUG00000023098	-	86	81.063	ENSCATG00000018349	RBFOX3	100	80.380	Cercocebus_atys
ENSHBUG00000023098	-	90	69.890	ENSCLAG00000006449	RBFOX3	100	71.088	Chinchilla_lanigera
ENSHBUG00000023098	-	86	81.063	ENSCSAG00000002355	RBFOX3	100	80.380	Chlorocebus_sabaeus
ENSHBUG00000023098	-	97	80.588	ENSCPBG00000010904	RBFOX3	100	80.635	Chrysemys_picta_bellii
ENSHBUG00000023098	-	86	81.063	ENSCANG00000043120	RBFOX3	100	80.380	Colobus_angolensis_palliatus
ENSHBUG00000023098	-	90	68.044	ENSCGRG00001019476	Rbfox3	100	70.106	Cricetulus_griseus_chok1gshd
ENSHBUG00000023098	-	90	68.044	ENSCGRG00000003268	Rbfox3	100	70.106	Cricetulus_griseus_crigri
ENSHBUG00000023098	-	97	84.866	ENSCSEG00000015567	RBFOX3	96	82.303	Cynoglossus_semilaevis
ENSHBUG00000023098	-	99	65.043	ENSCSEG00000020606	RBFOX3	92	66.246	Cynoglossus_semilaevis
ENSHBUG00000023098	-	95	81.928	ENSCVAG00000006882	rbfox3b	90	81.024	Cyprinodon_variegatus
ENSHBUG00000023098	-	95	83.333	ENSDARG00000010083	rbfox3a	99	84.498	Danio_rerio
ENSHBUG00000023098	-	99	67.151	ENSDARG00000074310	rbfox3b	97	73.894	Danio_rerio
ENSHBUG00000023098	-	72	69.024	ENSDNOG00000039391	RBFOX3	96	62.192	Dasypus_novemcinctus
ENSHBUG00000023098	-	90	60.556	ENSDORG00000005352	Rbfox3	100	62.766	Dipodomys_ordii
ENSHBUG00000023098	-	98	67.416	ENSEBUG00000002129	RBFOX3	99	68.258	Eptatretus_burgeri
ENSHBUG00000023098	-	81	58.020	ENSEBUG00000013559	RBFOX3	81	57.966	Eptatretus_burgeri
ENSHBUG00000023098	-	86	79.139	ENSEASG00005005059	RBFOX3	100	80.757	Equus_asinus_asinus
ENSHBUG00000023098	-	86	78.808	ENSECAG00000023811	RBFOX3	100	80.442	Equus_caballus
ENSHBUG00000023098	-	80	81.176	ENSEEUG00000013974	RBFOX3	76	88.000	Erinaceus_europaeus
ENSHBUG00000023098	-	99	82.370	ENSELUG00000017963	rbfox3b	100	73.780	Esox_lucius
ENSHBUG00000023098	-	96	79.104	ENSFCAG00000002555	RBFOX3	100	79.394	Felis_catus
ENSHBUG00000023098	-	99	61.235	ENSFALG00000012288	RBFOX3	99	61.728	Ficedula_albicollis
ENSHBUG00000023098	-	90	64.560	ENSFDAG00000007489	RBFOX3	100	65.435	Fukomys_damarensis
ENSHBUG00000023098	-	90	73.885	ENSFHEG00000008550	rbfox3b	100	72.930	Fundulus_heteroclitus
ENSHBUG00000023098	-	94	63.830	ENSGMOG00000019304	-	100	63.564	Gadus_morhua
ENSHBUG00000023098	-	96	80.838	ENSGALG00000032889	RBFOX3	92	80.240	Gallus_gallus
ENSHBUG00000023098	-	95	75.380	ENSGAFG00000005025	rbfox3b	88	81.046	Gambusia_affinis
ENSHBUG00000023098	-	90	75.482	ENSGACG00000002138	-	100	76.720	Gasterosteus_aculeatus
ENSHBUG00000023098	-	98	80.938	ENSGAGG00000020025	RBFOX3	100	80.952	Gopherus_agassizii
ENSHBUG00000023098	-	86	81.063	ENSGGOG00000012546	RBFOX3	100	80.380	Gorilla_gorilla
ENSHBUG00000023098	-	90	68.852	ENSHGLG00000008679	RBFOX3	100	70.079	Heterocephalus_glaber_female
ENSHBUG00000023098	-	90	65.301	ENSHGLG00100014739	RBFOX3	100	67.192	Heterocephalus_glaber_male
ENSHBUG00000023098	-	91	78.864	ENSHCOG00000001863	RBFOX3	93	78.864	Hippocampus_comes
ENSHBUG00000023098	-	88	73.529	ENSHCOG00000007444	RBFOX3	86	69.436	Hippocampus_comes
ENSHBUG00000023098	-	91	67.241	ENSIPUG00000021966	rbfox3b	94	75.889	Ictalurus_punctatus
ENSHBUG00000023098	-	99	81.429	ENSIPUG00000012010	rbfox3a	98	82.067	Ictalurus_punctatus
ENSHBUG00000023098	-	90	67.619	ENSSTOG00000026817	RBFOX3	100	68.182	Ictidomys_tridecemlineatus
ENSHBUG00000023098	-	90	69.061	ENSJJAG00000014167	Rbfox3	100	70.557	Jaculus_jaculus
ENSHBUG00000023098	-	95	81.928	ENSKMAG00000006726	rbfox3b	90	81.024	Kryptolebias_marmoratus
ENSHBUG00000023098	-	95	90.663	ENSLBEG00000022508	-	89	91.718	Labrus_bergylta
ENSHBUG00000023098	-	98	83.235	ENSLBEG00000004030	rbfox3b	100	77.603	Labrus_bergylta
ENSHBUG00000023098	-	63	59.140	ENSLACG00000000021	-	95	59.140	Latimeria_chalumnae
ENSHBUG00000023098	-	97	67.595	ENSLACG00000018409	-	100	67.595	Latimeria_chalumnae
ENSHBUG00000023098	-	93	87.423	ENSLOCG00000012267	rbfox3a	98	87.423	Lepisosteus_oculatus
ENSHBUG00000023098	-	98	69.543	ENSLAFG00000016623	RBFOX3	100	71.011	Loxodonta_africana
ENSHBUG00000023098	-	90	65.470	ENSMFAG00000002247	RBFOX3	100	69.972	Macaca_fascicularis
ENSHBUG00000023098	-	86	81.063	ENSMMUG00000023028	RBFOX3	100	80.380	Macaca_mulatta
ENSHBUG00000023098	-	86	80.731	ENSMNEG00000041147	RBFOX3	100	80.063	Macaca_nemestrina
ENSHBUG00000023098	-	86	81.063	ENSMLEG00000025686	RBFOX3	100	80.380	Mandrillus_leucophaeus
ENSHBUG00000023098	-	98	84.241	ENSMAMG00000020600	-	99	84.241	Mastacembelus_armatus
ENSHBUG00000023098	-	91	75.394	ENSMAMG00000019810	rbfox3b	100	74.448	Mastacembelus_armatus
ENSHBUG00000023098	-	73	99.052	ENSMZEG00005003055	-	81	78.466	Maylandia_zebra
ENSHBUG00000023098	-	99	82.659	ENSMZEG00005000781	rbfox3b	90	81.792	Maylandia_zebra
ENSHBUG00000023098	-	77	77.232	ENSMGAG00000005600	RBFOX3	84	78.125	Meleagris_gallopavo
ENSHBUG00000023098	-	90	69.061	ENSMAUG00000013543	Rbfox3	100	69.496	Mesocricetus_auratus
ENSHBUG00000023098	-	93	79.448	ENSMICG00000014898	RBFOX3	100	79.430	Microcebus_murinus
ENSHBUG00000023098	-	90	70.718	ENSMOCG00000015373	Rbfox3	100	71.088	Microtus_ochrogaster
ENSHBUG00000023098	-	95	80.539	ENSMMOG00000020193	rbfox3b	99	72.922	Mola_mola
ENSHBUG00000023098	-	96	79.641	ENSMODG00000002089	RBFOX3	92	79.042	Monodelphis_domestica
ENSHBUG00000023098	-	99	89.855	ENSMALG00000018270	-	97	84.326	Monopterus_albus
ENSHBUG00000023098	-	95	81.928	ENSMALG00000020407	rbfox3b	90	81.024	Monopterus_albus
ENSHBUG00000023098	-	90	80.635	MGP_CAROLIEiJ_G0017487	Rbfox3	96	87.770	Mus_caroli
ENSHBUG00000023098	-	90	80.317	ENSMUSG00000025576	Rbfox3	96	87.770	Mus_musculus
ENSHBUG00000023098	-	90	78.797	MGP_PahariEiJ_G0018614	Rbfox3	96	88.489	Mus_pahari
ENSHBUG00000023098	-	90	80.952	MGP_SPRETEiJ_G0018331	Rbfox3	96	87.770	Mus_spretus
ENSHBUG00000023098	-	99	72.798	ENSMPUG00000012319	RBFOX3	99	72.280	Mustela_putorius_furo
ENSHBUG00000023098	-	90	70.994	ENSNGAG00000018006	Rbfox3	100	71.353	Nannospalax_galili
ENSHBUG00000023098	-	95	81.325	ENSNBRG00000010102	rbfox3b	90	80.422	Neolamprologus_brichardi
ENSHBUG00000023098	-	97	90.504	ENSNBRG00000022885	-	92	90.504	Neolamprologus_brichardi
ENSHBUG00000023098	-	66	72.539	ENSNLEG00000000153	-	82	89.286	Nomascus_leucogenys
ENSHBUG00000023098	-	83	81.250	ENSMEUG00000004218	-	100	50.552	Notamacropus_eugenii
ENSHBUG00000023098	-	76	74.611	ENSOPRG00000016279	-	79	74.611	Ochotona_princeps
ENSHBUG00000023098	-	86	81.063	ENSODEG00000009433	RBFOX3	100	81.013	Octodon_degus
ENSHBUG00000023098	-	96	94.752	ENSONIG00000007282	-	100	94.752	Oreochromis_niloticus
ENSHBUG00000023098	-	95	82.229	ENSONIG00000009549	rbfox3b	100	73.913	Oreochromis_niloticus
ENSHBUG00000023098	-	74	60.000	ENSOCUG00000014217	RBFOX3	82	59.667	Oryctolagus_cuniculus
ENSHBUG00000023098	-	99	82.659	ENSORLG00000000905	rbfox3b	71	80.422	Oryzias_latipes
ENSHBUG00000023098	-	99	82.659	ENSORLG00020018030	rbfox3b	98	72.615	Oryzias_latipes_hni
ENSHBUG00000023098	-	99	79.063	ENSORLG00015009200	rbfox3b	99	72.611	Oryzias_latipes_hsok
ENSHBUG00000023098	-	99	61.721	ENSOMEG00000014677	rbfox3b	77	75.342	Oryzias_melastigma
ENSHBUG00000023098	-	100	73.600	ENSOGAG00000029595	RBFOX3	99	73.067	Otolemur_garnettii
ENSHBUG00000023098	-	98	57.908	ENSOARG00000002908	RBFOX3	100	57.398	Ovis_aries
ENSHBUG00000023098	-	73	80.392	ENSPPAG00000025383	RBFOX3	95	80.435	Pan_paniscus
ENSHBUG00000023098	-	86	68.035	ENSPPRG00000007819	RBFOX3	100	70.308	Panthera_pardus
ENSHBUG00000023098	-	86	81.063	ENSPTRG00000009727	RBFOX3	100	80.380	Pan_troglodytes
ENSHBUG00000023098	-	86	81.063	ENSPANG00000019837	RBFOX3	100	80.380	Papio_anubis
ENSHBUG00000023098	-	99	85.303	ENSPKIG00000010299	rbfox3a	88	83.660	Paramormyrops_kingsleyae
ENSHBUG00000023098	-	98	67.251	ENSPKIG00000022633	-	92	67.836	Paramormyrops_kingsleyae
ENSHBUG00000023098	-	82	78.947	ENSPMGG00000008000	rbfox3b	88	80.139	Periophthalmus_magnuspinnatus
ENSHBUG00000023098	-	90	70.442	ENSPEMG00000010500	Rbfox3	100	70.822	Peromyscus_maniculatus_bairdii
ENSHBUG00000023098	-	55	75.000	ENSPMAG00000008689	rbfox3b	99	76.471	Petromyzon_marinus
ENSHBUG00000023098	-	96	68.766	ENSPCIG00000005766	RBFOX3	100	70.476	Phascolarctos_cinereus
ENSHBUG00000023098	-	99	82.370	ENSPFOG00000018294	rbfox3b	90	81.503	Poecilia_formosa
ENSHBUG00000023098	-	74	83.398	ENSPLAG00000000481	rbfox3b	79	82.239	Poecilia_latipinna
ENSHBUG00000023098	-	90	73.567	ENSPMEG00000022997	rbfox3b	100	72.611	Poecilia_mexicana
ENSHBUG00000023098	-	96	81.548	ENSPREG00000012886	rbfox3b	95	80.838	Poecilia_reticulata
ENSHBUG00000023098	-	98	68.421	ENSPPYG00000008704	RBFOX3	100	68.421	Pongo_abelii
ENSHBUG00000023098	-	86	67.052	ENSPCAG00000001401	RBFOX3	100	69.252	Procavia_capensis
ENSHBUG00000023098	-	94	67.287	ENSPCOG00000012689	RBFOX3	100	69.146	Propithecus_coquereli
ENSHBUG00000023098	-	86	59.195	ENSPVAG00000015243	RBFOX3	100	63.085	Pteropus_vampyrus
ENSHBUG00000023098	-	95	72.340	ENSPNYG00000010414	rbfox3b	88	71.733	Pundamilia_nyererei
ENSHBUG00000023098	-	95	92.705	ENSPNYG00000009079	-	85	92.705	Pundamilia_nyererei
ENSHBUG00000023098	-	93	65.231	ENSPNAG00000018173	rbfox3b	93	64.000	Pygocentrus_nattereri
ENSHBUG00000023098	-	98	84.012	ENSPNAG00000002889	rbfox3a	89	84.302	Pygocentrus_nattereri
ENSHBUG00000023098	-	86	78.477	ENSRNOG00000003386	Rbfox3	100	80.442	Rattus_norvegicus
ENSHBUG00000023098	-	96	79.701	ENSRBIG00000040449	RBFOX3	92	79.104	Rhinopithecus_bieti
ENSHBUG00000023098	-	86	81.063	ENSRROG00000000766	RBFOX3	100	80.380	Rhinopithecus_roxellana
ENSHBUG00000023098	-	86	79.734	ENSSBOG00000031591	RBFOX3	100	79.114	Saimiri_boliviensis_boliviensis
ENSHBUG00000023098	-	98	68.486	ENSSHAG00000016076	RBFOX3	100	70.476	Sarcophilus_harrisii
ENSHBUG00000023098	-	99	86.744	ENSSFOG00015023260	rbfox3a	91	86.744	Scleropages_formosus
ENSHBUG00000023098	-	94	69.880	ENSSFOG00015004716	RBFOX3	92	72.561	Scleropages_formosus
ENSHBUG00000023098	-	96	86.787	ENSSMAG00000019052	-	100	87.261	Scophthalmus_maximus
ENSHBUG00000023098	-	99	77.961	ENSSMAG00000012618	rbfox3b	79	77.077	Scophthalmus_maximus
ENSHBUG00000023098	-	90	73.885	ENSSDUG00000023183	rbfox3b	100	72.930	Seriola_dumerili
ENSHBUG00000023098	-	99	81.180	ENSSDUG00000015801	-	98	81.408	Seriola_dumerili
ENSHBUG00000023098	-	95	82.229	ENSSLDG00000000149	rbfox3b	90	81.325	Seriola_lalandi_dorsalis
ENSHBUG00000023098	-	98	85.387	ENSSLDG00000016098	-	97	85.632	Seriola_lalandi_dorsalis
ENSHBUG00000023098	-	86	79.801	ENSSPUG00000011733	RBFOX3	99	80.696	Sphenodon_punctatus
ENSHBUG00000023098	-	95	73.860	ENSSPAG00000017571	rbfox3b	88	72.948	Stegastes_partitus
ENSHBUG00000023098	-	78	83.824	ENSSPAG00000004898	-	85	83.972	Stegastes_partitus
ENSHBUG00000023098	-	79	82.671	ENSSSCG00000039498	RBFOX3	100	72.072	Sus_scrofa
ENSHBUG00000023098	-	98	78.161	ENSTRUG00000004894	rbfox3b	97	78.161	Takifugu_rubripes
ENSHBUG00000023098	-	98	69.849	ENSTNIG00000011278	rbfox3b	99	69.095	Tetraodon_nigroviridis
ENSHBUG00000023098	-	66	54.513	ENSTBEG00000004296	-	100	48.128	Tupaia_belangeri
ENSHBUG00000023098	-	86	63.401	ENSTTRG00000003676	RBFOX3	100	64.365	Tursiops_truncatus
ENSHBUG00000023098	-	86	80.399	ENSUAMG00000004668	RBFOX3	100	79.747	Ursus_americanus
ENSHBUG00000023098	-	99	80.115	ENSVVUG00000017864	RBFOX3	100	80.063	Vulpes_vulpes
ENSHBUG00000023098	-	99	60.560	ENSXETG00000020236	rbfox3	99	61.069	Xenopus_tropicalis
ENSHBUG00000023098	-	95	81.381	ENSXCOG00000018262	rbfox3b	100	77.316	Xiphophorus_couchianus
ENSHBUG00000023098	-	99	82.659	ENSXMAG00000012939	rbfox3b	90	81.792	Xiphophorus_maculatus