EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000023289 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 16120 bases
Position: chrJH425327.1:514176-530295
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000035250	zf-met	PF12874.7	7.2e-15	1	2
ENSHBUP00000035250	zf-met	PF12874.7	7.2e-15	2	2
ENSHBUP00000035250	zf-C2H2_jaz	PF12171.8	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000030771	-	1309	-	ENSHBUP00000035250	133 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000023289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000023289	zgc:171482	94	68.000	ENSHBUG00000012634	zmat4a	66	68.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023289	zgc:171482	98	94.615	ENSAPOG00000019970	zgc:171482	79	94.615	Acanthochromis_polyacanthus
ENSHBUG00000023289	zgc:171482	88	98.291	ENSACIG00000021512	zgc:171482	87	98.291	Amphilophus_citrinellus
ENSHBUG00000023289	zgc:171482	96	94.531	ENSAOCG00000000751	zgc:171482	94	94.531	Amphiprion_ocellaris
ENSHBUG00000023289	zgc:171482	100	94.737	ENSAPEG00000014154	zgc:171482	96	94.737	Amphiprion_percula
ENSHBUG00000023289	zgc:171482	86	96.522	ENSATEG00000001371	zgc:171482	79	94.215	Anabas_testudineus
ENSHBUG00000023289	zgc:171482	98	98.473	ENSACLG00000010511	zgc:171482	91	98.473	Astatotilapia_calliptera
ENSHBUG00000023289	zgc:171482	88	94.017	ENSAMXG00000002299	zgc:171482	89	94.017	Astyanax_mexicanus
ENSHBUG00000023289	zgc:171482	89	93.277	ENSCSEG00000006509	zgc:171482	78	93.277	Cynoglossus_semilaevis
ENSHBUG00000023289	zgc:171482	91	96.694	ENSCVAG00000013606	zgc:171482	80	96.694	Cyprinodon_variegatus
ENSHBUG00000023289	zgc:171482	92	89.344	ENSDARG00000074415	zgc:171482	91	89.344	Danio_rerio
ENSHBUG00000023289	zgc:171482	93	68.800	ENSELUG00000017517	-	97	58.333	Esox_lucius
ENSHBUG00000023289	zgc:171482	98	89.231	ENSELUG00000021817	zgc:171482	94	89.231	Esox_lucius
ENSHBUG00000023289	zgc:171482	96	95.312	ENSFHEG00000002233	zgc:171482	91	95.312	Fundulus_heteroclitus
ENSHBUG00000023289	zgc:171482	94	92.800	ENSGMOG00000010508	zgc:171482	79	92.800	Gadus_morhua
ENSHBUG00000023289	zgc:171482	89	98.319	ENSGAFG00000009398	zgc:171482	78	98.319	Gambusia_affinis
ENSHBUG00000023289	zgc:171482	94	95.200	ENSGACG00000007680	zgc:171482	80	95.200	Gasterosteus_aculeatus
ENSHBUG00000023289	zgc:171482	98	87.879	ENSHCOG00000018086	zgc:171482	99	87.879	Hippocampus_comes
ENSHBUG00000023289	zgc:171482	89	94.068	ENSIPUG00000000361	zgc:171482	86	94.068	Ictalurus_punctatus
ENSHBUG00000023289	zgc:171482	94	95.200	ENSKMAG00000005077	zgc:171482	68	95.200	Kryptolebias_marmoratus
ENSHBUG00000023289	zgc:171482	97	91.473	ENSLBEG00000023823	zgc:171482	92	91.473	Labrus_bergylta
ENSHBUG00000023289	zgc:171482	88	92.308	ENSLOCG00000008863	zgc:171482	77	92.308	Lepisosteus_oculatus
ENSHBUG00000023289	zgc:171482	100	92.481	ENSMAMG00000001031	zgc:171482	84	92.481	Mastacembelus_armatus
ENSHBUG00000023289	zgc:171482	98	87.692	ENSMZEG00005027721	zgc:171482	79	87.692	Maylandia_zebra
ENSHBUG00000023289	zgc:171482	98	93.893	ENSMMOG00000010523	zgc:171482	100	93.893	Mola_mola
ENSHBUG00000023289	zgc:171482	92	95.935	ENSMALG00000017883	zgc:171482	80	95.935	Monopterus_albus
ENSHBUG00000023289	zgc:171482	87	98.276	ENSNBRG00000021035	zgc:171482	87	98.276	Neolamprologus_brichardi
ENSHBUG00000023289	zgc:171482	95	99.206	ENSONIG00000018365	zgc:171482	78	99.206	Oreochromis_niloticus
ENSHBUG00000023289	zgc:171482	99	95.455	ENSORLG00000007607	zgc:171482	93	95.455	Oryzias_latipes
ENSHBUG00000023289	zgc:171482	99	94.697	ENSORLG00020003563	zgc:171482	93	94.697	Oryzias_latipes_hni
ENSHBUG00000023289	zgc:171482	99	95.455	ENSORLG00015008552	zgc:171482	93	95.455	Oryzias_latipes_hsok
ENSHBUG00000023289	zgc:171482	97	95.349	ENSOMEG00000003526	zgc:171482	91	95.349	Oryzias_melastigma
ENSHBUG00000023289	zgc:171482	87	95.690	ENSPKIG00000015911	-	81	95.690	Paramormyrops_kingsleyae
ENSHBUG00000023289	zgc:171482	83	90.909	ENSPKIG00000016244	zgc:171482	84	87.288	Paramormyrops_kingsleyae
ENSHBUG00000023289	zgc:171482	94	94.400	ENSPMGG00000020230	zgc:171482	82	94.400	Periophthalmus_magnuspinnatus
ENSHBUG00000023289	zgc:171482	95	96.063	ENSPFOG00000001974	zgc:171482	79	96.063	Poecilia_formosa
ENSHBUG00000023289	zgc:171482	96	93.750	ENSPLAG00000003327	zgc:171482	79	93.750	Poecilia_latipinna
ENSHBUG00000023289	zgc:171482	97	95.349	ENSPMEG00000004988	zgc:171482	78	95.349	Poecilia_mexicana
ENSHBUG00000023289	zgc:171482	95	96.032	ENSPREG00000019241	zgc:171482	91	96.032	Poecilia_reticulata
ENSHBUG00000023289	zgc:171482	98	98.473	ENSPNYG00000007773	zgc:171482	91	98.473	Pundamilia_nyererei
ENSHBUG00000023289	zgc:171482	86	93.913	ENSPNAG00000007619	zgc:171482	79	89.600	Pygocentrus_nattereri
ENSHBUG00000023289	zgc:171482	98	83.846	ENSSFOG00015021238	zgc:171482	78	91.379	Scleropages_formosus
ENSHBUG00000023289	zgc:171482	97	83.721	ENSSFOG00015016149	zgc:171482	98	83.721	Scleropages_formosus
ENSHBUG00000023289	zgc:171482	100	92.481	ENSSMAG00000002715	zgc:171482	85	92.481	Scophthalmus_maximus
ENSHBUG00000023289	zgc:171482	95	94.488	ENSSDUG00000008773	zgc:171482	89	94.488	Seriola_dumerili
ENSHBUG00000023289	zgc:171482	95	94.488	ENSSLDG00000019510	zgc:171482	89	94.488	Seriola_lalandi_dorsalis
ENSHBUG00000023289	zgc:171482	93	96.774	ENSSPAG00000013724	zgc:171482	98	96.774	Stegastes_partitus
ENSHBUG00000023289	zgc:171482	97	90.698	ENSTRUG00000005705	zgc:171482	76	90.698	Takifugu_rubripes
ENSHBUG00000023289	zgc:171482	93	71.774	ENSTNIG00000008679	zgc:171482	80	71.774	Tetraodon_nigroviridis
ENSHBUG00000023289	zgc:171482	74	88.889	ENSXETG00000013525	zmat4	75	88.889	Xenopus_tropicalis
ENSHBUG00000023289	zgc:171482	89	87.500	ENSXMAG00000002641	zgc:171482	77	87.500	Xiphophorus_maculatus