EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000023322 (Gene tree)
Gene ID: 102291576
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 66445 bases
Position: chrJH425324.1:2409660-2476104
Accession: 102291576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000019991	ResIII	PF04851.15	1.8e-06	1	1
ENSHBUP00000019940	ResIII	PF04851.15	1.8e-06	1	1
ENSHBUP00000019853	BRK	PF07533.16	1e-32	1	2
ENSHBUP00000019853	BRK	PF07533.16	1e-32	2	2
ENSHBUP00000019940	BRK	PF07533.16	6e-32	1	2
ENSHBUP00000019940	BRK	PF07533.16	6e-32	2	2
ENSHBUP00000019991	BRK	PF07533.16	9.3e-32	1	2
ENSHBUP00000019991	BRK	PF07533.16	9.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000029438	-	7449	XM_005912965	ENSHBUP00000019940	2482 (aa)	XP_005913027	-
ENSHBUT00000029322	-	2916	-	ENSHBUP00000019853	971 (aa)	-	-
ENSHBUT00000029495	-	8697	XM_005912962	ENSHBUP00000019991	2898 (aa)	XP_005913024	-
ENSHBUT00000029371	-	1401	-	ENSHBUP00000019894	466 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000023322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000023322	chd9	77	76.471	ENSHBUG00000019225	chd7	59	69.597
ENSHBUG00000023322	chd9	72	63.574	ENSHBUG00000014701	chd6	56	63.322
ENSHBUG00000023322	chd9	73	58.368	ENSHBUG00000002850	chd8	75	57.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023322	chd9	98	68.697	ENSG00000177200	CHD9	91	77.778	Homo_sapiens
ENSHBUG00000023322	chd9	99	91.264	ENSAPOG00000023034	chd9	99	90.137	Acanthochromis_polyacanthus
ENSHBUG00000023322	chd9	96	70.280	ENSAMEG00000016232	CHD9	79	71.326	Ailuropoda_melanoleuca
ENSHBUG00000023322	chd9	97	92.657	ENSACIG00000004097	chd9	98	89.199	Amphilophus_citrinellus
ENSHBUG00000023322	chd9	99	91.868	ENSAOCG00000005487	chd9	99	90.258	Amphiprion_ocellaris
ENSHBUG00000023322	chd9	99	91.707	ENSAPEG00000009859	chd9	99	90.217	Amphiprion_percula
ENSHBUG00000023322	chd9	99	89.657	ENSATEG00000002748	chd9	99	83.345	Anabas_testudineus
ENSHBUG00000023322	chd9	98	70.526	ENSAPLG00000002826	CHD9	84	71.734	Anas_platyrhynchos
ENSHBUG00000023322	chd9	98	69.825	ENSACAG00000016150	CHD9	78	70.220	Anolis_carolinensis
ENSHBUG00000023322	chd9	96	69.231	ENSANAG00000015630	CHD9	92	69.474	Aotus_nancymaae
ENSHBUG00000023322	chd9	99	100.000	ENSACLG00000016899	chd9	100	96.076	Astatotilapia_calliptera
ENSHBUG00000023322	chd9	99	75.807	ENSAMXG00000005652	chd9	99	75.239	Astyanax_mexicanus
ENSHBUG00000023322	chd9	96	69.930	ENSBTAG00000002287	CHD9	79	70.725	Bos_taurus
ENSHBUG00000023322	chd9	97	69.580	ENSCJAG00000001573	CHD9	92	69.825	Callithrix_jacchus
ENSHBUG00000023322	chd9	96	70.280	ENSCAFG00000009699	CHD9	79	71.386	Canis_familiaris
ENSHBUG00000023322	chd9	96	70.280	ENSCAFG00020002879	CHD9	91	70.526	Canis_lupus_dingo
ENSHBUG00000023322	chd9	96	66.551	ENSCHIG00000021000	CHD9	56	75.106	Capra_hircus
ENSHBUG00000023322	chd9	96	69.930	ENSTSYG00000007693	CHD9	91	70.526	Carlito_syrichta
ENSHBUG00000023322	chd9	74	81.967	ENSCAPG00000011604	CHD9	69	62.457	Cavia_aperea
ENSHBUG00000023322	chd9	96	69.231	ENSCPOG00000036544	CHD9	84	67.776	Cavia_porcellus
ENSHBUG00000023322	chd9	96	70.526	ENSCCAG00000036178	CHD9	92	70.423	Cebus_capucinus
ENSHBUG00000023322	chd9	96	70.280	ENSCATG00000036753	CHD9	92	69.896	Cercocebus_atys
ENSHBUG00000023322	chd9	96	69.930	ENSCLAG00000007137	CHD9	99	75.862	Chinchilla_lanigera
ENSHBUG00000023322	chd9	96	70.280	ENSCSAG00000005311	CHD9	79	70.860	Chlorocebus_sabaeus
ENSHBUG00000023322	chd9	72	82.692	ENSCHOG00000003935	CHD9	55	91.361	Choloepus_hoffmanni
ENSHBUG00000023322	chd9	90	83.483	ENSCPBG00000012459	CHD9	85	78.951	Chrysemys_picta_bellii
ENSHBUG00000023322	chd9	96	70.280	ENSCANG00000030349	CHD9	92	70.526	Colobus_angolensis_palliatus
ENSHBUG00000023322	chd9	96	69.580	ENSCGRG00001016150	Chd9	79	69.924	Cricetulus_griseus_chok1gshd
ENSHBUG00000023322	chd9	96	69.580	ENSCGRG00000012850	Chd9	99	75.885	Cricetulus_griseus_crigri
ENSHBUG00000023322	chd9	99	84.307	ENSCSEG00000009209	chd9	99	84.006	Cynoglossus_semilaevis
ENSHBUG00000023322	chd9	94	87.601	ENSCVAG00000016195	chd9	99	79.472	Cyprinodon_variegatus
ENSHBUG00000023322	chd9	99	75.883	ENSDARG00000074498	chd9	99	75.683	Danio_rerio
ENSHBUG00000023322	chd9	96	69.580	ENSDNOG00000006045	CHD9	94	71.347	Dasypus_novemcinctus
ENSHBUG00000023322	chd9	96	70.526	ENSDORG00000008523	-	96	71.479	Dipodomys_ordii
ENSHBUG00000023322	chd9	86	85.714	ENSETEG00000009565	CHD9	76	91.270	Echinops_telfairi
ENSHBUG00000023322	chd9	89	77.534	ENSEASG00005014832	CHD9	95	78.890	Equus_asinus_asinus
ENSHBUG00000023322	chd9	96	69.930	ENSECAG00000011505	CHD9	79	70.791	Equus_caballus
ENSHBUG00000023322	chd9	74	86.784	ENSEEUG00000014515	CHD9	68	83.978	Erinaceus_europaeus
ENSHBUG00000023322	chd9	97	78.126	ENSELUG00000006031	chd9	99	77.690	Esox_lucius
ENSHBUG00000023322	chd9	96	70.629	ENSFCAG00000022534	CHD9	91	70.877	Felis_catus
ENSHBUG00000023322	chd9	98	71.228	ENSFALG00000013276	CHD9	97	70.605	Ficedula_albicollis
ENSHBUG00000023322	chd9	96	69.930	ENSFDAG00000021037	CHD9	84	70.851	Fukomys_damarensis
ENSHBUG00000023322	chd9	99	85.835	ENSFHEG00000006068	chd9	98	86.711	Fundulus_heteroclitus
ENSHBUG00000023322	chd9	80	85.802	ENSGMOG00000006040	chd9	83	85.734	Gadus_morhua
ENSHBUG00000023322	chd9	93	71.199	ENSGALG00000039178	CHD9	80	71.907	Gallus_gallus
ENSHBUG00000023322	chd9	99	86.632	ENSGAFG00000010014	chd9	99	86.230	Gambusia_affinis
ENSHBUG00000023322	chd9	97	85.324	ENSGACG00000016694	chd9	69	89.146	Gasterosteus_aculeatus
ENSHBUG00000023322	chd9	98	60.664	ENSGAGG00000001048	-	91	66.897	Gopherus_agassizii
ENSHBUG00000023322	chd9	96	69.930	ENSGGOG00000014816	CHD9	92	70.175	Gorilla_gorilla
ENSHBUG00000023322	chd9	96	69.930	ENSHGLG00000014938	CHD9	96	79.241	Heterocephalus_glaber_female
ENSHBUG00000023322	chd9	90	63.072	ENSHGLG00100007620	-	91	65.965	Heterocephalus_glaber_male
ENSHBUG00000023322	chd9	96	83.265	ENSHCOG00000000937	chd9	97	83.285	Hippocampus_comes
ENSHBUG00000023322	chd9	99	77.374	ENSIPUG00000016448	chd9	97	81.818	Ictalurus_punctatus
ENSHBUG00000023322	chd9	95	70.629	ENSSTOG00000022273	CHD9	99	75.781	Ictidomys_tridecemlineatus
ENSHBUG00000023322	chd9	96	69.580	ENSJJAG00000015741	-	96	70.594	Jaculus_jaculus
ENSHBUG00000023322	chd9	96	88.260	ENSKMAG00000016784	chd9	99	86.271	Kryptolebias_marmoratus
ENSHBUG00000023322	chd9	99	87.555	ENSLBEG00000012077	chd9	99	86.787	Labrus_bergylta
ENSHBUG00000023322	chd9	97	64.867	ENSLACG00000005557	CHD9	79	66.639	Latimeria_chalumnae
ENSHBUG00000023322	chd9	98	74.790	ENSLOCG00000007225	chd9	97	75.985	Lepisosteus_oculatus
ENSHBUG00000023322	chd9	96	68.041	ENSLAFG00000015374	CHD9	79	70.333	Loxodonta_africana
ENSHBUG00000023322	chd9	96	70.280	ENSMFAG00000041354	CHD9	93	70.788	Macaca_fascicularis
ENSHBUG00000023322	chd9	96	70.280	ENSMMUG00000016310	CHD9	92	70.526	Macaca_mulatta
ENSHBUG00000023322	chd9	95	70.280	ENSMNEG00000031494	CHD9	80	72.406	Macaca_nemestrina
ENSHBUG00000023322	chd9	96	70.280	ENSMLEG00000043219	CHD9	92	70.526	Mandrillus_leucophaeus
ENSHBUG00000023322	chd9	99	89.657	ENSMAMG00000003909	chd9	99	82.966	Mastacembelus_armatus
ENSHBUG00000023322	chd9	100	98.671	ENSMZEG00005006581	chd9	100	98.671	Maylandia_zebra
ENSHBUG00000023322	chd9	98	70.877	ENSMGAG00000004642	CHD9	59	72.051	Meleagris_gallopavo
ENSHBUG00000023322	chd9	93	60.126	ENSMAUG00000000526	-	92	68.702	Mesocricetus_auratus
ENSHBUG00000023322	chd9	96	70.629	ENSMICG00000016679	CHD9	91	70.877	Microcebus_murinus
ENSHBUG00000023322	chd9	96	61.436	ENSMOCG00000010691	-	91	70.175	Microtus_ochrogaster
ENSHBUG00000023322	chd9	98	85.223	ENSMMOG00000016406	chd9	99	82.022	Mola_mola
ENSHBUG00000023322	chd9	85	76.121	ENSMODG00000013142	-	95	78.094	Monodelphis_domestica
ENSHBUG00000023322	chd9	98	87.190	ENSMALG00000013306	chd9	99	81.985	Monopterus_albus
ENSHBUG00000023322	chd9	90	69.930	MGP_CAROLIEiJ_G0031364	Chd9	79	70.252	Mus_caroli
ENSHBUG00000023322	chd9	95	70.280	ENSMUSG00000056608	Chd9	99	74.972	Mus_musculus
ENSHBUG00000023322	chd9	90	69.231	MGP_PahariEiJ_G0022964	Chd9	79	69.313	Mus_pahari
ENSHBUG00000023322	chd9	95	69.930	MGP_SPRETEiJ_G0032483	Chd9	79	69.898	Mus_spretus
ENSHBUG00000023322	chd9	96	70.629	ENSMPUG00000003285	CHD9	80	69.872	Mustela_putorius_furo
ENSHBUG00000023322	chd9	96	70.280	ENSMLUG00000004456	CHD9	79	70.506	Myotis_lucifugus
ENSHBUG00000023322	chd9	96	59.837	ENSNGAG00000015820	-	91	69.474	Nannospalax_galili
ENSHBUG00000023322	chd9	100	97.284	ENSNBRG00000009423	chd9	100	97.284	Neolamprologus_brichardi
ENSHBUG00000023322	chd9	67	74.895	ENSNLEG00000001026	CHD9	80	72.540	Nomascus_leucogenys
ENSHBUG00000023322	chd9	72	94.737	ENSMEUG00000008222	-	74	90.446	Notamacropus_eugenii
ENSHBUG00000023322	chd9	84	86.567	ENSOPRG00000011168	CHD9	67	86.479	Ochotona_princeps
ENSHBUG00000023322	chd9	96	69.474	ENSODEG00000004466	CHD9	84	70.643	Octodon_degus
ENSHBUG00000023322	chd9	99	94.897	ENSONIG00000002816	chd9	100	94.897	Oreochromis_niloticus
ENSHBUG00000023322	chd9	96	70.175	ENSOANG00000013401	CHD9	79	71.719	Ornithorhynchus_anatinus
ENSHBUG00000023322	chd9	98	69.580	ENSOCUG00000001016	CHD9	96	69.438	Oryctolagus_cuniculus
ENSHBUG00000023322	chd9	96	86.881	ENSORLG00000013810	chd9	97	85.545	Oryzias_latipes
ENSHBUG00000023322	chd9	97	84.552	ENSORLG00020020665	chd9	98	78.853	Oryzias_latipes_hni
ENSHBUG00000023322	chd9	98	86.321	ENSORLG00015019126	chd9	97	85.922	Oryzias_latipes_hsok
ENSHBUG00000023322	chd9	55	90.789	ENSOMEG00000015978	chd9	99	80.498	Oryzias_melastigma
ENSHBUG00000023322	chd9	97	68.959	ENSOGAG00000002110	CHD9	79	70.830	Otolemur_garnettii
ENSHBUG00000023322	chd9	96	68.858	ENSOARG00000017664	CHD9	79	70.593	Ovis_aries
ENSHBUG00000023322	chd9	96	69.930	ENSPPAG00000039388	-	96	70.283	Pan_paniscus
ENSHBUG00000023322	chd9	96	70.979	ENSPPRG00000004801	CHD9	91	70.526	Panthera_pardus
ENSHBUG00000023322	chd9	97	67.925	ENSPTIG00000021854	CHD9	91	62.105	Panthera_tigris_altaica
ENSHBUG00000023322	chd9	96	69.930	ENSPTRG00000008113	CHD9	92	70.175	Pan_troglodytes
ENSHBUG00000023322	chd9	98	68.417	ENSPANG00000019307	CHD9	96	70.425	Papio_anubis
ENSHBUG00000023322	chd9	97	70.991	ENSPKIG00000025401	-	97	64.239	Paramormyrops_kingsleyae
ENSHBUG00000023322	chd9	95	77.295	ENSPKIG00000021876	chd9	96	77.805	Paramormyrops_kingsleyae
ENSHBUG00000023322	chd9	56	76.564	ENSPSIG00000008099	CHD9	71	78.024	Pelodiscus_sinensis
ENSHBUG00000023322	chd9	97	75.393	ENSPMGG00000021802	chd9	98	84.083	Periophthalmus_magnuspinnatus
ENSHBUG00000023322	chd9	96	59.877	ENSPEMG00000021464	-	91	70.175	Peromyscus_maniculatus_bairdii
ENSHBUG00000023322	chd9	60	69.671	ENSPMAG00000006035	-	86	69.671	Petromyzon_marinus
ENSHBUG00000023322	chd9	86	70.692	ENSPCIG00000017215	CHD9	97	73.353	Phascolarctos_cinereus
ENSHBUG00000023322	chd9	99	86.669	ENSPFOG00000015839	chd9	99	78.557	Poecilia_formosa
ENSHBUG00000023322	chd9	99	87.565	ENSPLAG00000011118	chd9	99	87.163	Poecilia_latipinna
ENSHBUG00000023322	chd9	99	85.888	ENSPMEG00000015106	chd9	99	80.767	Poecilia_mexicana
ENSHBUG00000023322	chd9	96	88.388	ENSPREG00000006473	chd9	99	86.104	Poecilia_reticulata
ENSHBUG00000023322	chd9	96	69.580	ENSPPYG00000007348	CHD9	80	70.484	Pongo_abelii
ENSHBUG00000023322	chd9	73	79.144	ENSPCAG00000007564	CHD9	68	80.809	Procavia_capensis
ENSHBUG00000023322	chd9	96	69.580	ENSPCOG00000028433	CHD9	91	69.825	Propithecus_coquereli
ENSHBUG00000023322	chd9	87	86.567	ENSPVAG00000015617	CHD9	76	73.588	Pteropus_vampyrus
ENSHBUG00000023322	chd9	99	100.000	ENSPNYG00000010947	chd9	100	98.203	Pundamilia_nyererei
ENSHBUG00000023322	chd9	98	81.404	ENSPNAG00000024141	chd9	99	76.562	Pygocentrus_nattereri
ENSHBUG00000023322	chd9	86	66.842	ENSRNOG00000049302	Chd9	93	59.050	Rattus_norvegicus
ENSHBUG00000023322	chd9	96	70.280	ENSRBIG00000035553	CHD9	96	70.467	Rhinopithecus_bieti
ENSHBUG00000023322	chd9	96	69.782	ENSRROG00000033278	CHD9	97	70.188	Rhinopithecus_roxellana
ENSHBUG00000023322	chd9	97	69.027	ENSSBOG00000030240	CHD9	92	69.825	Saimiri_boliviensis_boliviensis
ENSHBUG00000023322	chd9	97	69.134	ENSSHAG00000002719	CHD9	79	71.112	Sarcophilus_harrisii
ENSHBUG00000023322	chd9	97	78.322	ENSSFOG00015001327	chd9	96	74.296	Scleropages_formosus
ENSHBUG00000023322	chd9	96	77.433	ENSSFOG00015020209	chd9	99	75.575	Scleropages_formosus
ENSHBUG00000023322	chd9	97	89.851	ENSSMAG00000008953	chd9	99	88.335	Scophthalmus_maximus
ENSHBUG00000023322	chd9	99	90.858	ENSSDUG00000006139	chd9	99	90.146	Seriola_dumerili
ENSHBUG00000023322	chd9	99	91.425	ENSSLDG00000017818	chd9	99	90.539	Seriola_lalandi_dorsalis
ENSHBUG00000023322	chd9	96	62.771	ENSSPUG00000017465	-	91	72.887	Sphenodon_punctatus
ENSHBUG00000023322	chd9	99	91.710	ENSSPAG00000021649	chd9	99	90.584	Stegastes_partitus
ENSHBUG00000023322	chd9	96	70.280	ENSSSCG00000033591	CHD9	61	75.713	Sus_scrofa
ENSHBUG00000023322	chd9	87	72.376	ENSTGUG00000007476	CHD9	80	73.451	Taeniopygia_guttata
ENSHBUG00000023322	chd9	98	85.517	ENSTRUG00000009125	chd9	99	79.652	Takifugu_rubripes
ENSHBUG00000023322	chd9	74	80.822	ENSTNIG00000003825	chd9	87	87.081	Tetraodon_nigroviridis
ENSHBUG00000023322	chd9	59	93.220	ENSTBEG00000016052	-	66	93.220	Tupaia_belangeri
ENSHBUG00000023322	chd9	82	74.224	ENSTTRG00000012674	CHD9	72	71.195	Tursiops_truncatus
ENSHBUG00000023322	chd9	96	70.280	ENSUAMG00000022706	CHD9	96	68.672	Ursus_americanus
ENSHBUG00000023322	chd9	78	85.729	ENSUMAG00000004043	CHD9	93	86.892	Ursus_maritimus
ENSHBUG00000023322	chd9	96	70.629	ENSVPAG00000001374	CHD9	76	69.941	Vicugna_pacos
ENSHBUG00000023322	chd9	96	70.280	ENSVVUG00000019435	CHD9	79	71.386	Vulpes_vulpes
ENSHBUG00000023322	chd9	96	66.953	ENSXETG00000000349	chd9	78	75.137	Xenopus_tropicalis
ENSHBUG00000023322	chd9	99	86.869	ENSXCOG00000012997	chd9	99	86.923	Xiphophorus_couchianus
ENSHBUG00000023322	chd9	99	87.360	ENSXMAG00000016192	chd9	99	86.918	Xiphophorus_maculatus