EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000023370 (Gene tree)
Gene ID: 102308216
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5826 bases
Position: chrJH425578.1:766191-772016
Accession: 102308216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000021052	Exo_endo_phos	PF03372.23	4.7e-16	1	1
ENSHBUP00000021020	Exo_endo_phos	PF03372.23	6e-16	1	1
ENSHBUP00000035279	Exo_endo_phos	PF03372.23	9.3e-16	1	1
ENSHBUP00000021079	Exo_endo_phos	PF03372.23	6.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000030829	-	2545	-	ENSHBUP00000035279	626 (aa)	-	-
ENSHBUT00000036187	-	1740	-	ENSHBUP00000021020	579 (aa)	-	-
ENSHBUT00000030852	-	3229	-	ENSHBUP00000021079	575 (aa)	-	-
ENSHBUT00000036205	-	2443	XM_005938889	ENSHBUP00000021052	592 (aa)	XP_005938951	UPI0003BCFA41

Gene Model

Click here to download ENSHBUG00000023370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000023370	pde12	53	30.564	ENSHBUG00000001687	noctb	78	31.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023370	pde12	96	57.458	ENSG00000174840	PDE12	96	57.868	Homo_sapiens
ENSHBUG00000023370	pde12	99	80.301	ENSAPOG00000018806	pde12	99	80.301	Acanthochromis_polyacanthus
ENSHBUG00000023370	pde12	98	56.230	ENSAMEG00000011802	PDE12	99	59.091	Ailuropoda_melanoleuca
ENSHBUG00000023370	pde12	100	90.404	ENSACIG00000014918	pde12	100	90.404	Amphilophus_citrinellus
ENSHBUG00000023370	pde12	99	82.403	ENSAOCG00000016376	pde12	99	82.403	Amphiprion_ocellaris
ENSHBUG00000023370	pde12	99	82.234	ENSAPEG00000000756	pde12	99	82.234	Amphiprion_percula
ENSHBUG00000023370	pde12	100	79.054	ENSATEG00000003072	pde12	99	80.351	Anabas_testudineus
ENSHBUG00000023370	pde12	94	53.251	ENSACAG00000003067	PDE12	94	53.954	Anolis_carolinensis
ENSHBUG00000023370	pde12	94	58.304	ENSANAG00000011815	PDE12	94	58.752	Aotus_nancymaae
ENSHBUG00000023370	pde12	100	99.324	ENSACLG00000010127	pde12	100	99.324	Astatotilapia_calliptera
ENSHBUG00000023370	pde12	98	64.587	ENSAMXG00000020765	pde12	99	64.587	Astyanax_mexicanus
ENSHBUG00000023370	pde12	96	58.376	ENSBTAG00000015563	PDE12	96	58.376	Bos_taurus
ENSHBUG00000023370	pde12	54	30.655	WBGene00011268	pde-12	52	30.655	Caenorhabditis_elegans
ENSHBUG00000023370	pde12	94	58.549	ENSCJAG00000019905	PDE12	94	59.067	Callithrix_jacchus
ENSHBUG00000023370	pde12	94	57.509	ENSCAFG00000007792	PDE12	98	56.402	Canis_familiaris
ENSHBUG00000023370	pde12	94	57.732	ENSCAFG00020006692	PDE12	98	56.494	Canis_lupus_dingo
ENSHBUG00000023370	pde12	96	58.685	ENSCHIG00000014202	PDE12	96	58.685	Capra_hircus
ENSHBUG00000023370	pde12	94	57.686	ENSTSYG00000025750	PDE12	99	56.557	Carlito_syrichta
ENSHBUG00000023370	pde12	94	58.895	ENSCPOG00000001620	PDE12	95	59.240	Cavia_porcellus
ENSHBUG00000023370	pde12	94	52.622	ENSCCAG00000031290	PDE12	94	62.281	Cebus_capucinus
ENSHBUG00000023370	pde12	94	58.722	ENSCATG00000044539	PDE12	94	58.722	Cercocebus_atys
ENSHBUG00000023370	pde12	94	56.747	ENSCLAG00000004864	PDE12	94	57.586	Chinchilla_lanigera
ENSHBUG00000023370	pde12	94	58.651	ENSCSAG00000012275	PDE12	94	58.651	Chlorocebus_sabaeus
ENSHBUG00000023370	pde12	84	64.130	ENSCHOG00000002188	-	83	64.130	Choloepus_hoffmanni
ENSHBUG00000023370	pde12	65	63.753	ENSCHOG00000012173	-	99	60.964	Choloepus_hoffmanni
ENSHBUG00000023370	pde12	94	58.144	ENSCPBG00000012353	PDE12	91	58.319	Chrysemys_picta_bellii
ENSHBUG00000023370	pde12	93	36.250	ENSCING00000006903	-	99	37.238	Ciona_intestinalis
ENSHBUG00000023370	pde12	94	59.067	ENSCANG00000038723	PDE12	94	59.067	Colobus_angolensis_palliatus
ENSHBUG00000023370	pde12	94	58.176	ENSCGRG00001021836	Pde12	95	58.895	Cricetulus_griseus_chok1gshd
ENSHBUG00000023370	pde12	94	58.204	ENSCGRG00000012319	Pde12	94	58.681	Cricetulus_griseus_crigri
ENSHBUG00000023370	pde12	94	76.029	ENSCSEG00000018538	pde12	100	76.029	Cynoglossus_semilaevis
ENSHBUG00000023370	pde12	82	84.314	ENSCVAG00000003624	pde12	93	84.516	Cyprinodon_variegatus
ENSHBUG00000023370	pde12	94	62.075	ENSDARG00000030964	pde12	93	62.075	Danio_rerio
ENSHBUG00000023370	pde12	94	57.778	ENSDNOG00000048413	PDE12	94	58.219	Dasypus_novemcinctus
ENSHBUG00000023370	pde12	94	57.858	ENSDORG00000004313	Pde12	98	57.262	Dipodomys_ordii
ENSHBUG00000023370	pde12	89	36.447	FBgn0051759	CG31759	93	36.447	Drosophila_melanogaster
ENSHBUG00000023370	pde12	72	44.578	ENSEBUG00000004803	pde12	79	44.578	Eptatretus_burgeri
ENSHBUG00000023370	pde12	94	58.722	ENSEASG00005000644	PDE12	94	59.067	Equus_asinus_asinus
ENSHBUG00000023370	pde12	94	58.895	ENSECAG00000005326	PDE12	94	59.240	Equus_caballus
ENSHBUG00000023370	pde12	51	63.975	ENSEEUG00000010406	-	52	63.975	Erinaceus_europaeus
ENSHBUG00000023370	pde12	99	64.587	ENSELUG00000014391	pde12	98	64.755	Esox_lucius
ENSHBUG00000023370	pde12	94	57.886	ENSFCAG00000031696	PDE12	94	58.304	Felis_catus
ENSHBUG00000023370	pde12	81	59.959	ENSFALG00000008401	PDE12	99	60.788	Ficedula_albicollis
ENSHBUG00000023370	pde12	95	58.048	ENSFDAG00000021278	PDE12	95	58.562	Fukomys_damarensis
ENSHBUG00000023370	pde12	94	75.632	ENSFHEG00000018967	pde12	91	75.134	Fundulus_heteroclitus
ENSHBUG00000023370	pde12	95	63.009	ENSGMOG00000018041	pde12	99	63.009	Gadus_morhua
ENSHBUG00000023370	pde12	94	59.286	ENSGALG00000052355	PDE12	95	59.286	Gallus_gallus
ENSHBUG00000023370	pde12	99	76.650	ENSGAFG00000002045	pde12	99	76.650	Gambusia_affinis
ENSHBUG00000023370	pde12	100	75.253	ENSGACG00000003914	pde12	100	76.094	Gasterosteus_aculeatus
ENSHBUG00000023370	pde12	94	58.070	ENSGAGG00000010266	PDE12	91	58.772	Gopherus_agassizii
ENSHBUG00000023370	pde12	94	58.895	ENSGGOG00000003312	PDE12	94	58.895	Gorilla_gorilla
ENSHBUG00000023370	pde12	94	57.513	ENSHGLG00000005661	PDE12	94	57.931	Heterocephalus_glaber_female
ENSHBUG00000023370	pde12	94	57.612	ENSHGLG00100001136	PDE12	94	58.031	Heterocephalus_glaber_male
ENSHBUG00000023370	pde12	100	69.154	ENSHCOG00000013749	pde12	100	69.154	Hippocampus_comes
ENSHBUG00000023370	pde12	95	65.018	ENSIPUG00000007123	Pde12	95	65.018	Ictalurus_punctatus
ENSHBUG00000023370	pde12	96	56.441	ENSSTOG00000007861	PDE12	96	56.949	Ictidomys_tridecemlineatus
ENSHBUG00000023370	pde12	94	57.581	ENSJJAG00000006038	Pde12	94	57.850	Jaculus_jaculus
ENSHBUG00000023370	pde12	99	80.034	ENSKMAG00000018523	pde12	99	80.034	Kryptolebias_marmoratus
ENSHBUG00000023370	pde12	95	74.431	ENSLBEG00000026775	pde12	100	73.378	Labrus_bergylta
ENSHBUG00000023370	pde12	96	79.029	ENSLBEG00000009762	PDE12	100	78.464	Labrus_bergylta
ENSHBUG00000023370	pde12	95	62.857	ENSLACG00000015492	PDE12	94	62.857	Latimeria_chalumnae
ENSHBUG00000023370	pde12	95	62.522	ENSLOCG00000013277	pde12	94	63.055	Lepisosteus_oculatus
ENSHBUG00000023370	pde12	92	58.907	ENSLAFG00000002821	PDE12	100	58.481	Loxodonta_africana
ENSHBUG00000023370	pde12	94	58.895	ENSMFAG00000030966	PDE12	94	58.895	Macaca_fascicularis
ENSHBUG00000023370	pde12	94	58.895	ENSMMUG00000004052	PDE12	94	58.895	Macaca_mulatta
ENSHBUG00000023370	pde12	94	58.895	ENSMNEG00000030068	PDE12	94	58.895	Macaca_nemestrina
ENSHBUG00000023370	pde12	94	58.895	ENSMLEG00000036137	PDE12	94	58.895	Mandrillus_leucophaeus
ENSHBUG00000023370	pde12	100	82.770	ENSMAMG00000014415	pde12	100	82.770	Mastacembelus_armatus
ENSHBUG00000023370	pde12	100	99.831	ENSMZEG00005016132	pde12	100	99.831	Maylandia_zebra
ENSHBUG00000023370	pde12	96	94.561	ENSMZEG00005028202	-	99	94.867	Maylandia_zebra
ENSHBUG00000023370	pde12	54	65.312	ENSMGAG00000006449	PDE12	99	65.312	Meleagris_gallopavo
ENSHBUG00000023370	pde12	94	56.591	ENSMAUG00000000442	Pde12	95	56.591	Mesocricetus_auratus
ENSHBUG00000023370	pde12	94	57.858	ENSMICG00000005723	PDE12	94	58.377	Microcebus_murinus
ENSHBUG00000023370	pde12	95	57.217	ENSMOCG00000020734	Pde12	97	57.976	Microtus_ochrogaster
ENSHBUG00000023370	pde12	100	77.365	ENSMMOG00000013636	pde12	100	77.365	Mola_mola
ENSHBUG00000023370	pde12	94	56.545	ENSMODG00000000155	PDE12	95	56.545	Monodelphis_domestica
ENSHBUG00000023370	pde12	100	77.196	ENSMALG00000022647	pde12	100	77.196	Monopterus_albus
ENSHBUG00000023370	pde12	96	57.479	MGP_CAROLIEiJ_G0019032	Pde12	97	58.037	Mus_caroli
ENSHBUG00000023370	pde12	96	57.744	ENSMUSG00000043702	Pde12	97	58.305	Mus_musculus
ENSHBUG00000023370	pde12	94	58.662	MGP_PahariEiJ_G0030049	Pde12	95	58.895	Mus_pahari
ENSHBUG00000023370	pde12	96	57.647	MGP_SPRETEiJ_G0019916	Pde12	97	58.206	Mus_spretus
ENSHBUG00000023370	pde12	94	57.439	ENSMPUG00000016869	PDE12	94	57.958	Mustela_putorius_furo
ENSHBUG00000023370	pde12	94	58.621	ENSMLUG00000026487	PDE12	95	59.310	Myotis_lucifugus
ENSHBUG00000023370	pde12	96	57.895	ENSNGAG00000001228	Pde12	97	57.895	Nannospalax_galili
ENSHBUG00000023370	pde12	99	87.966	ENSNBRG00000015769	pde12	69	87.966	Neolamprologus_brichardi
ENSHBUG00000023370	pde12	96	54.685	ENSNLEG00000034833	-	95	54.685	Nomascus_leucogenys
ENSHBUG00000023370	pde12	94	58.722	ENSNLEG00000007269	-	94	58.722	Nomascus_leucogenys
ENSHBUG00000023370	pde12	94	55.098	ENSMEUG00000006786	PDE12	94	56.128	Notamacropus_eugenii
ENSHBUG00000023370	pde12	94	58.176	ENSOPRG00000015273	PDE12	94	59.450	Ochotona_princeps
ENSHBUG00000023370	pde12	94	58.507	ENSODEG00000006268	PDE12	96	58.037	Octodon_degus
ENSHBUG00000023370	pde12	94	99.104	ENSONIG00000004293	pde12	100	99.104	Oreochromis_niloticus
ENSHBUG00000023370	pde12	90	55.335	ENSOANG00000012885	PDE12	99	56.522	Ornithorhynchus_anatinus
ENSHBUG00000023370	pde12	94	58.925	ENSOCUG00000000823	PDE12	94	59.310	Oryctolagus_cuniculus
ENSHBUG00000023370	pde12	100	73.524	ENSORLG00000017444	pde12	100	74.199	Oryzias_latipes
ENSHBUG00000023370	pde12	100	72.850	ENSORLG00020010469	pde12	100	73.524	Oryzias_latipes_hni
ENSHBUG00000023370	pde12	100	73.356	ENSORLG00015004093	pde12	100	74.199	Oryzias_latipes_hsok
ENSHBUG00000023370	pde12	100	72.973	ENSOMEG00000020900	pde12	100	72.973	Oryzias_melastigma
ENSHBUG00000023370	pde12	94	58.031	ENSOGAG00000024093	PDE12	94	58.549	Otolemur_garnettii
ENSHBUG00000023370	pde12	90	59.066	ENSOARG00000013642	PDE12	100	59.066	Ovis_aries
ENSHBUG00000023370	pde12	94	58.549	ENSPPAG00000034712	PDE12	94	58.549	Pan_paniscus
ENSHBUG00000023370	pde12	94	57.785	ENSPPRG00000011738	PDE12	94	58.304	Panthera_pardus
ENSHBUG00000023370	pde12	83	58.300	ENSPTIG00000019166	PDE12	95	58.498	Panthera_tigris_altaica
ENSHBUG00000023370	pde12	94	58.722	ENSPTRG00000030221	PDE12	94	58.722	Pan_troglodytes
ENSHBUG00000023370	pde12	94	58.722	ENSPANG00000007324	PDE12	94	58.722	Papio_anubis
ENSHBUG00000023370	pde12	95	62.700	ENSPKIG00000025354	pde12	95	62.700	Paramormyrops_kingsleyae
ENSHBUG00000023370	pde12	94	58.407	ENSPSIG00000004926	PDE12	91	59.115	Pelodiscus_sinensis
ENSHBUG00000023370	pde12	100	65.077	ENSPMGG00000006742	pde12	99	66.725	Periophthalmus_magnuspinnatus
ENSHBUG00000023370	pde12	80	59.529	ENSPEMG00000007259	Pde12	92	60.766	Peromyscus_maniculatus_bairdii
ENSHBUG00000023370	pde12	99	79.229	ENSPFOG00000011864	pde12	99	79.229	Poecilia_formosa
ENSHBUG00000023370	pde12	73	80.556	ENSPLAG00000023871	pde12	80	80.556	Poecilia_latipinna
ENSHBUG00000023370	pde12	99	79.188	ENSPMEG00000005674	pde12	99	79.188	Poecilia_mexicana
ENSHBUG00000023370	pde12	99	78.511	ENSPREG00000022831	pde12	99	78.511	Poecilia_reticulata
ENSHBUG00000023370	pde12	94	58.651	ENSPPYG00000013769	PDE12	94	58.651	Pongo_abelii
ENSHBUG00000023370	pde12	94	57.513	ENSPCOG00000026004	PDE12	94	58.031	Propithecus_coquereli
ENSHBUG00000023370	pde12	94	58.261	ENSPVAG00000008885	PDE12	94	58.609	Pteropus_vampyrus
ENSHBUG00000023370	pde12	100	99.493	ENSPNYG00000013258	pde12	100	99.493	Pundamilia_nyererei
ENSHBUG00000023370	pde12	98	68.096	ENSPNAG00000029032	pde12	98	68.096	Pygocentrus_nattereri
ENSHBUG00000023370	pde12	94	58.191	ENSRNOG00000059442	Pde12	95	58.692	Rattus_norvegicus
ENSHBUG00000023370	pde12	94	58.895	ENSRBIG00000040704	PDE12	94	58.895	Rhinopithecus_bieti
ENSHBUG00000023370	pde12	94	58.895	ENSRROG00000031279	PDE12	94	58.895	Rhinopithecus_roxellana
ENSHBUG00000023370	pde12	94	58.261	ENSSBOG00000023974	PDE12	94	58.925	Saimiri_boliviensis_boliviensis
ENSHBUG00000023370	pde12	80	66.369	ENSSFOG00015003468	pde12	87	66.369	Scleropages_formosus
ENSHBUG00000023370	pde12	94	77.660	ENSSMAG00000003258	pde12	96	76.289	Scophthalmus_maximus
ENSHBUG00000023370	pde12	100	82.264	ENSSDUG00000020470	pde12	100	82.264	Seriola_dumerili
ENSHBUG00000023370	pde12	100	79.730	ENSSLDG00000019833	pde12	100	79.730	Seriola_lalandi_dorsalis
ENSHBUG00000023370	pde12	94	58.783	ENSSARG00000007201	PDE12	95	59.233	Sorex_araneus
ENSHBUG00000023370	pde12	99	79.019	ENSSPAG00000014980	pde12	99	79.019	Stegastes_partitus
ENSHBUG00000023370	pde12	94	58.621	ENSSSCG00000011465	-	94	59.310	Sus_scrofa
ENSHBUG00000023370	pde12	54	55.312	ENSSSCG00000034476	-	74	55.625	Sus_scrofa
ENSHBUG00000023370	pde12	63	62.803	ENSTGUG00000007290	PDE12	100	62.803	Taeniopygia_guttata
ENSHBUG00000023370	pde12	100	73.693	ENSTRUG00000005159	pde12	99	73.693	Takifugu_rubripes
ENSHBUG00000023370	pde12	99	73.051	ENSTNIG00000017497	pde12	99	73.051	Tetraodon_nigroviridis
ENSHBUG00000023370	pde12	74	63.399	ENSTBEG00000008202	PDE12	74	63.399	Tupaia_belangeri
ENSHBUG00000023370	pde12	94	58.204	ENSTTRG00000014707	PDE12	94	59.067	Tursiops_truncatus
ENSHBUG00000023370	pde12	73	49.883	ENSUAMG00000008368	-	90	50.718	Ursus_americanus
ENSHBUG00000023370	pde12	94	58.031	ENSUAMG00000020634	-	94	58.377	Ursus_americanus
ENSHBUG00000023370	pde12	73	59.909	ENSUMAG00000021906	PDE12	100	60.137	Ursus_maritimus
ENSHBUG00000023370	pde12	94	57.831	ENSVVUG00000020335	PDE12	92	58.348	Vulpes_vulpes
ENSHBUG00000023370	pde12	94	50.269	ENSXETG00000008653	pde12	97	50.269	Xenopus_tropicalis
ENSHBUG00000023370	pde12	95	78.761	ENSXCOG00000000407	pde12	98	78.761	Xiphophorus_couchianus
ENSHBUG00000023370	pde12	99	77.834	ENSXMAG00000013370	pde12	100	77.834	Xiphophorus_maculatus