EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000023421 (Gene tree)
Gene ID: 102294898
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4868 bases
Position: chrJH425332.1:3616911-3621778
Accession: 102294898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000021139	tRNA_Me_trans	PF03054.16	1.5e-135	1	1
ENSHBUP00000035340	tRNA_Me_trans	PF03054.16	3.7e-127	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000036244	-	2584	-	ENSHBUP00000035340	377 (aa)	-	-
ENSHBUT00000030930	-	2491	XM_005915712	ENSHBUP00000021139	416 (aa)	XP_005915774	UPI0003BCC924

Gene Model

Click here to download ENSHBUG00000023421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023421	trmu	99	69.976	ENSG00000100416	TRMU	96	76.101	Homo_sapiens
ENSHBUG00000023421	trmu	100	88.010	ENSAPOG00000014458	trmu	100	88.010	Acanthochromis_polyacanthus
ENSHBUG00000023421	trmu	97	69.863	ENSAMEG00000003319	TRMU	96	70.175	Ailuropoda_melanoleuca
ENSHBUG00000023421	trmu	100	93.510	ENSACIG00000002101	trmu	100	93.510	Amphilophus_citrinellus
ENSHBUG00000023421	trmu	100	88.729	ENSAOCG00000013155	trmu	100	88.729	Amphiprion_ocellaris
ENSHBUG00000023421	trmu	100	88.489	ENSAPEG00000013350	trmu	100	88.489	Amphiprion_percula
ENSHBUG00000023421	trmu	100	84.375	ENSATEG00000007814	trmu	100	84.375	Anabas_testudineus
ENSHBUG00000023421	trmu	93	71.318	ENSAPLG00000016380	TRMU	98	71.318	Anas_platyrhynchos
ENSHBUG00000023421	trmu	97	70.685	ENSACAG00000007720	TRMU	95	70.886	Anolis_carolinensis
ENSHBUG00000023421	trmu	98	69.919	ENSANAG00000038053	TRMU	95	70.223	Aotus_nancymaae
ENSHBUG00000023421	trmu	100	99.519	ENSACLG00000005395	trmu	100	99.519	Astatotilapia_calliptera
ENSHBUG00000023421	trmu	98	80.217	ENSAMXG00000005282	trmu	99	78.729	Astyanax_mexicanus
ENSHBUG00000023421	trmu	98	69.919	ENSBTAG00000005595	TRMU	95	70.781	Bos_taurus
ENSHBUG00000023421	trmu	96	40.751	WBGene00007114	mttu-1	98	40.921	Caenorhabditis_elegans
ENSHBUG00000023421	trmu	98	69.106	ENSCJAG00000000198	TRMU	99	67.626	Callithrix_jacchus
ENSHBUG00000023421	trmu	98	69.919	ENSCAFG00000000779	TRMU	95	69.727	Canis_familiaris
ENSHBUG00000023421	trmu	98	69.919	ENSCAFG00020009184	TRMU	95	69.727	Canis_lupus_dingo
ENSHBUG00000023421	trmu	98	69.648	ENSCHIG00000017074	TRMU	95	70.529	Capra_hircus
ENSHBUG00000023421	trmu	98	70.732	ENSTSYG00000003853	TRMU	96	70.471	Carlito_syrichta
ENSHBUG00000023421	trmu	94	65.848	ENSCAPG00000013034	TRMU	96	65.848	Cavia_aperea
ENSHBUG00000023421	trmu	98	68.835	ENSCPOG00000020780	TRMU	96	69.727	Cavia_porcellus
ENSHBUG00000023421	trmu	98	68.835	ENSCCAG00000021641	TRMU	99	67.788	Cebus_capucinus
ENSHBUG00000023421	trmu	98	69.648	ENSCATG00000032800	TRMU	95	70.426	Cercocebus_atys
ENSHBUG00000023421	trmu	98	69.377	ENSCLAG00000017269	TRMU	96	69.975	Chinchilla_lanigera
ENSHBUG00000023421	trmu	98	69.648	ENSCSAG00000005279	TRMU	96	69.630	Chlorocebus_sabaeus
ENSHBUG00000023421	trmu	91	71.345	ENSCPBG00000011621	TRMU	93	71.774	Chrysemys_picta_bellii
ENSHBUG00000023421	trmu	97	46.866	ENSCING00000019371	-	97	47.103	Ciona_intestinalis
ENSHBUG00000023421	trmu	98	69.377	ENSCANG00000041645	TRMU	96	69.136	Colobus_angolensis_palliatus
ENSHBUG00000023421	trmu	98	69.106	ENSCGRG00001001739	Trmu	96	69.231	Cricetulus_griseus_chok1gshd
ENSHBUG00000023421	trmu	98	63.415	ENSCGRG00000002781	Trmu	96	64.020	Cricetulus_griseus_crigri
ENSHBUG00000023421	trmu	98	80.759	ENSCSEG00000012382	trmu	99	79.710	Cynoglossus_semilaevis
ENSHBUG00000023421	trmu	100	87.019	ENSCVAG00000001366	trmu	100	87.019	Cyprinodon_variegatus
ENSHBUG00000023421	trmu	98	76.152	ENSDARG00000043734	trmu	100	74.038	Danio_rerio
ENSHBUG00000023421	trmu	64	56.343	ENSDNOG00000047245	-	94	56.343	Dasypus_novemcinctus
ENSHBUG00000023421	trmu	98	70.190	ENSDORG00000007455	Trmu	97	70.927	Dipodomys_ordii
ENSHBUG00000023421	trmu	97	44.414	FBgn0040337	CG3021	95	44.301	Drosophila_melanogaster
ENSHBUG00000023421	trmu	51	72.881	ENSETEG00000009394	-	66	72.881	Echinops_telfairi
ENSHBUG00000023421	trmu	97	55.256	ENSEBUG00000007454	trmu	98	56.012	Eptatretus_burgeri
ENSHBUG00000023421	trmu	98	71.003	ENSEASG00005021725	TRMU	96	70.968	Equus_asinus_asinus
ENSHBUG00000023421	trmu	98	71.003	ENSECAG00000000467	TRMU	95	70.968	Equus_caballus
ENSHBUG00000023421	trmu	68	53.169	ENSEEUG00000000074	-	68	53.169	Erinaceus_europaeus
ENSHBUG00000023421	trmu	98	81.081	ENSELUG00000009464	trmu	99	81.250	Esox_lucius
ENSHBUG00000023421	trmu	98	70.732	ENSFCAG00000006533	TRMU	95	70.927	Felis_catus
ENSHBUG00000023421	trmu	91	71.143	ENSFALG00000010035	TRMU	96	71.316	Ficedula_albicollis
ENSHBUG00000023421	trmu	91	68.158	ENSFDAG00000017472	TRMU	97	68.158	Fukomys_damarensis
ENSHBUG00000023421	trmu	100	86.779	ENSFHEG00000003162	trmu	100	86.779	Fundulus_heteroclitus
ENSHBUG00000023421	trmu	98	72.654	ENSGMOG00000001323	trmu	100	72.973	Gadus_morhua
ENSHBUG00000023421	trmu	98	71.618	ENSGALG00000031922	TRMU	96	72.236	Gallus_gallus
ENSHBUG00000023421	trmu	99	87.805	ENSGAFG00000013331	trmu	98	87.805	Gambusia_affinis
ENSHBUG00000023421	trmu	100	84.870	ENSGACG00000019024	trmu	100	84.870	Gasterosteus_aculeatus
ENSHBUG00000023421	trmu	99	69.734	ENSGGOG00000000203	TRMU	98	69.734	Gorilla_gorilla
ENSHBUG00000023421	trmu	98	68.293	ENSHGLG00000009278	TRMU	95	68.905	Heterocephalus_glaber_female
ENSHBUG00000023421	trmu	98	68.293	ENSHGLG00100018863	TRMU	95	68.905	Heterocephalus_glaber_male
ENSHBUG00000023421	trmu	98	86.179	ENSHCOG00000013459	trmu	99	84.300	Hippocampus_comes
ENSHBUG00000023421	trmu	98	77.778	ENSIPUG00000009785	trmu	99	77.805	Ictalurus_punctatus
ENSHBUG00000023421	trmu	98	69.648	ENSSTOG00000010993	TRMU	96	70.223	Ictidomys_tridecemlineatus
ENSHBUG00000023421	trmu	98	68.564	ENSJJAG00000000667	Trmu	96	69.154	Jaculus_jaculus
ENSHBUG00000023421	trmu	100	85.337	ENSKMAG00000008516	trmu	100	85.337	Kryptolebias_marmoratus
ENSHBUG00000023421	trmu	100	85.577	ENSLBEG00000018831	trmu	100	85.577	Labrus_bergylta
ENSHBUG00000023421	trmu	97	77.929	ENSLACG00000013713	TRMU	96	76.923	Latimeria_chalumnae
ENSHBUG00000023421	trmu	98	79.675	ENSLOCG00000016066	trmu	96	79.500	Lepisosteus_oculatus
ENSHBUG00000023421	trmu	99	61.594	ENSLAFG00000005129	TRMU	99	61.594	Loxodonta_africana
ENSHBUG00000023421	trmu	98	69.919	ENSMFAG00000039767	TRMU	96	69.877	Macaca_fascicularis
ENSHBUG00000023421	trmu	98	69.919	ENSMMUG00000000807	TRMU	96	69.877	Macaca_mulatta
ENSHBUG00000023421	trmu	98	69.919	ENSMNEG00000028164	TRMU	96	69.877	Macaca_nemestrina
ENSHBUG00000023421	trmu	98	69.648	ENSMLEG00000033884	TRMU	95	70.426	Mandrillus_leucophaeus
ENSHBUG00000023421	trmu	100	85.577	ENSMAMG00000004717	trmu	100	85.577	Mastacembelus_armatus
ENSHBUG00000023421	trmu	100	99.279	ENSMZEG00005015797	trmu	100	99.279	Maylandia_zebra
ENSHBUG00000023421	trmu	76	71.779	ENSMGAG00000007550	TRMU	95	71.779	Meleagris_gallopavo
ENSHBUG00000023421	trmu	98	68.835	ENSMAUG00000022282	Trmu	96	69.173	Mesocricetus_auratus
ENSHBUG00000023421	trmu	98	69.377	ENSMICG00000029046	TRMU	97	69.674	Microcebus_murinus
ENSHBUG00000023421	trmu	98	69.377	ENSMOCG00000014641	Trmu	99	68.370	Microtus_ochrogaster
ENSHBUG00000023421	trmu	100	82.692	ENSMMOG00000007229	trmu	100	82.692	Mola_mola
ENSHBUG00000023421	trmu	97	67.030	ENSMODG00000007433	TRMU	93	67.839	Monodelphis_domestica
ENSHBUG00000023421	trmu	98	87.534	ENSMALG00000007721	trmu	100	85.337	Monopterus_albus
ENSHBUG00000023421	trmu	99	67.640	MGP_CAROLIEiJ_G0020134	Trmu	99	67.640	Mus_caroli
ENSHBUG00000023421	trmu	99	67.874	ENSMUSG00000022386	Trmu	99	67.874	Mus_musculus
ENSHBUG00000023421	trmu	99	67.633	MGP_PahariEiJ_G0020139	Trmu	99	67.633	Mus_pahari
ENSHBUG00000023421	trmu	99	67.874	MGP_SPRETEiJ_G0021031	Trmu	99	67.874	Mus_spretus
ENSHBUG00000023421	trmu	98	69.648	ENSMPUG00000002523	TRMU	96	68.889	Mustela_putorius_furo
ENSHBUG00000023421	trmu	99	68.675	ENSNGAG00000005132	Trmu	99	68.675	Nannospalax_galili
ENSHBUG00000023421	trmu	100	99.038	ENSNBRG00000022690	trmu	100	99.038	Neolamprologus_brichardi
ENSHBUG00000023421	trmu	98	70.461	ENSNLEG00000015773	TRMU	96	70.471	Nomascus_leucogenys
ENSHBUG00000023421	trmu	87	58.716	ENSMEUG00000000216	TRMU	99	58.716	Notamacropus_eugenii
ENSHBUG00000023421	trmu	98	68.835	ENSODEG00000014745	TRMU	97	69.383	Octodon_degus
ENSHBUG00000023421	trmu	100	98.558	ENSONIG00000009821	trmu	100	98.558	Oreochromis_niloticus
ENSHBUG00000023421	trmu	93	64.267	ENSOANG00000001891	TRMU	98	64.267	Ornithorhynchus_anatinus
ENSHBUG00000023421	trmu	91	69.298	ENSOCUG00000003664	TRMU	94	68.528	Oryctolagus_cuniculus
ENSHBUG00000023421	trmu	99	83.051	ENSORLG00000019015	trmu	99	83.051	Oryzias_latipes
ENSHBUG00000023421	trmu	99	83.293	ENSORLG00020006830	trmu	99	83.293	Oryzias_latipes_hni
ENSHBUG00000023421	trmu	99	83.293	ENSORLG00015003907	trmu	99	83.293	Oryzias_latipes_hsok
ENSHBUG00000023421	trmu	55	89.520	ENSOMEG00000015541	trmu	83	89.520	Oryzias_melastigma
ENSHBUG00000023421	trmu	98	68.293	ENSOGAG00000008096	TRMU	97	68.238	Otolemur_garnettii
ENSHBUG00000023421	trmu	98	68.564	ENSOARG00000019475	TRMU	93	67.368	Ovis_aries
ENSHBUG00000023421	trmu	99	69.734	ENSPPAG00000033944	TRMU	98	69.734	Pan_paniscus
ENSHBUG00000023421	trmu	98	70.461	ENSPPRG00000004197	TRMU	95	70.677	Panthera_pardus
ENSHBUG00000023421	trmu	73	71.119	ENSPTIG00000014122	TRMU	97	73.004	Panthera_tigris_altaica
ENSHBUG00000023421	trmu	99	69.734	ENSPTRG00000014510	TRMU	98	69.734	Pan_troglodytes
ENSHBUG00000023421	trmu	98	69.648	ENSPANG00000023074	TRMU	97	67.671	Papio_anubis
ENSHBUG00000023421	trmu	100	76.923	ENSPKIG00000002849	trmu	100	76.923	Paramormyrops_kingsleyae
ENSHBUG00000023421	trmu	89	71.557	ENSPSIG00000013020	TRMU	95	71.978	Pelodiscus_sinensis
ENSHBUG00000023421	trmu	100	83.654	ENSPMGG00000004083	trmu	100	83.654	Periophthalmus_magnuspinnatus
ENSHBUG00000023421	trmu	100	67.788	ENSPEMG00000014007	Trmu	98	67.788	Peromyscus_maniculatus_bairdii
ENSHBUG00000023421	trmu	96	66.759	ENSPCIG00000009923	TRMU	93	66.835	Phascolarctos_cinereus
ENSHBUG00000023421	trmu	97	83.911	ENSPFOG00000008197	trmu	90	83.911	Poecilia_formosa
ENSHBUG00000023421	trmu	99	86.957	ENSPLAG00000008414	trmu	99	86.957	Poecilia_latipinna
ENSHBUG00000023421	trmu	100	87.260	ENSPMEG00000004326	trmu	100	87.260	Poecilia_mexicana
ENSHBUG00000023421	trmu	98	88.347	ENSPREG00000007980	trmu	99	87.198	Poecilia_reticulata
ENSHBUG00000023421	trmu	98	70.732	ENSPPYG00000011949	TRMU	98	69.639	Pongo_abelii
ENSHBUG00000023421	trmu	93	62.532	ENSPCAG00000013462	TRMU	99	62.532	Procavia_capensis
ENSHBUG00000023421	trmu	98	68.835	ENSPCOG00000016539	TRMU	96	69.173	Propithecus_coquereli
ENSHBUG00000023421	trmu	98	64.228	ENSPVAG00000013202	TRMU	97	64.516	Pteropus_vampyrus
ENSHBUG00000023421	trmu	100	99.519	ENSPNYG00000005629	trmu	100	99.519	Pundamilia_nyererei
ENSHBUG00000023421	trmu	100	78.365	ENSPNAG00000006339	trmu	97	78.365	Pygocentrus_nattereri
ENSHBUG00000023421	trmu	98	68.293	ENSRNOG00000016465	Trmu	97	68.486	Rattus_norvegicus
ENSHBUG00000023421	trmu	98	69.106	ENSRBIG00000038973	TRMU	96	68.642	Rhinopithecus_bieti
ENSHBUG00000023421	trmu	98	69.377	ENSRROG00000004267	TRMU	96	68.889	Rhinopithecus_roxellana
ENSHBUG00000023421	trmu	97	33.077	YDL033C	SLM3	94	33.172	Saccharomyces_cerevisiae
ENSHBUG00000023421	trmu	99	68.269	ENSSBOG00000030184	TRMU	99	68.269	Saimiri_boliviensis_boliviensis
ENSHBUG00000023421	trmu	89	76.946	ENSSFOG00015020664	trmu	99	74.934	Scleropages_formosus
ENSHBUG00000023421	trmu	100	86.779	ENSSMAG00000019450	trmu	100	86.779	Scophthalmus_maximus
ENSHBUG00000023421	trmu	100	88.221	ENSSDUG00000011913	trmu	100	88.221	Seriola_dumerili
ENSHBUG00000023421	trmu	100	87.981	ENSSLDG00000011684	trmu	100	87.981	Seriola_lalandi_dorsalis
ENSHBUG00000023421	trmu	99	59.709	ENSSPUG00000017123	TRMU	96	59.709	Sphenodon_punctatus
ENSHBUG00000023421	trmu	100	85.577	ENSSPAG00000021875	trmu	100	85.577	Stegastes_partitus
ENSHBUG00000023421	trmu	98	69.106	ENSSSCG00000000007	TRMU	96	69.727	Sus_scrofa
ENSHBUG00000023421	trmu	91	72.674	ENSTGUG00000003663	-	100	72.922	Taeniopygia_guttata
ENSHBUG00000023421	trmu	98	85.908	ENSTRUG00000001231	trmu	100	84.746	Takifugu_rubripes
ENSHBUG00000023421	trmu	99	83.855	ENSTNIG00000010484	trmu	98	83.855	Tetraodon_nigroviridis
ENSHBUG00000023421	trmu	72	54.444	ENSTBEG00000011276	-	77	54.444	Tupaia_belangeri
ENSHBUG00000023421	trmu	98	70.732	ENSTTRG00000004160	TRMU	95	71.429	Tursiops_truncatus
ENSHBUG00000023421	trmu	77	72.509	ENSUAMG00000024825	TRMU	97	72.509	Ursus_americanus
ENSHBUG00000023421	trmu	97	57.816	ENSUMAG00000019079	TRMU	97	72.266	Ursus_maritimus
ENSHBUG00000023421	trmu	58	61.187	ENSVPAG00000000685	-	100	61.187	Vicugna_pacos
ENSHBUG00000023421	trmu	98	69.106	ENSVVUG00000024963	TRMU	96	68.983	Vulpes_vulpes
ENSHBUG00000023421	trmu	98	74.324	ENSXETG00000023304	trmu	94	74.314	Xenopus_tropicalis
ENSHBUG00000023421	trmu	99	85.372	ENSXCOG00000015105	trmu	99	85.372	Xiphophorus_couchianus
ENSHBUG00000023421	trmu	98	89.160	ENSXMAG00000006697	trmu	99	87.923	Xiphophorus_maculatus