EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000023466 (Gene tree)
Gene ID: 102304797
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 8510 bases
Position: chrJH425507.1:999076-1007585
Accession: 102304797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000035323	Beta-Casp	PF10996.8	5.9e-21	1	1
ENSHBUP00000035323	Lactamase_B	PF00753.27	2.5e-06	1	1
ENSHBUP00000035323	RMMBL	PF07521.12	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000036236	-	2821	XM_005935411	ENSHBUP00000035323	787 (aa)	XP_005935473	UPI0003BDBDFE

Gene Model

Click here to download ENSHBUG00000023466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023466's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023466	cpsf2	100	85.171	ENSG00000165934	CPSF2	100	85.171	Homo_sapiens
ENSHBUG00000023466	cpsf2	100	95.426	ENSAPOG00000001242	cpsf2	100	95.426	Acanthochromis_polyacanthus
ENSHBUG00000023466	cpsf2	100	96.447	ENSACIG00000009331	cpsf2	100	96.447	Amphilophus_citrinellus
ENSHBUG00000023466	cpsf2	100	95.807	ENSAOCG00000014095	cpsf2	100	95.807	Amphiprion_ocellaris
ENSHBUG00000023466	cpsf2	100	95.807	ENSAPEG00000009158	cpsf2	100	95.807	Amphiprion_percula
ENSHBUG00000023466	cpsf2	96	93.799	ENSATEG00000017644	cpsf2	99	93.456	Anabas_testudineus
ENSHBUG00000023466	cpsf2	100	85.316	ENSAPLG00000006330	CPSF2	100	85.316	Anas_platyrhynchos
ENSHBUG00000023466	cpsf2	100	84.664	ENSACAG00000009245	CPSF2	100	84.664	Anolis_carolinensis
ENSHBUG00000023466	cpsf2	100	85.298	ENSANAG00000022915	CPSF2	100	85.298	Aotus_nancymaae
ENSHBUG00000023466	cpsf2	100	89.100	ENSAMXG00000018696	cpsf2	100	89.100	Astyanax_mexicanus
ENSHBUG00000023466	cpsf2	100	85.298	ENSBTAG00000010227	CPSF2	100	85.298	Bos_taurus
ENSHBUG00000023466	cpsf2	100	41.415	WBGene00017313	cpsf-2	100	41.549	Caenorhabditis_elegans
ENSHBUG00000023466	cpsf2	100	85.298	ENSCJAG00000018069	CPSF2	100	85.298	Callithrix_jacchus
ENSHBUG00000023466	cpsf2	100	85.171	ENSCAFG00000010909	CPSF2	100	85.171	Canis_familiaris
ENSHBUG00000023466	cpsf2	100	85.171	ENSCAFG00020020670	CPSF2	100	85.171	Canis_lupus_dingo
ENSHBUG00000023466	cpsf2	100	85.298	ENSCHIG00000023848	CPSF2	100	85.298	Capra_hircus
ENSHBUG00000023466	cpsf2	100	85.171	ENSTSYG00000009036	CPSF2	100	85.171	Carlito_syrichta
ENSHBUG00000023466	cpsf2	100	85.298	ENSCPOG00000010899	CPSF2	100	85.298	Cavia_porcellus
ENSHBUG00000023466	cpsf2	100	85.298	ENSCCAG00000028088	CPSF2	100	85.298	Cebus_capucinus
ENSHBUG00000023466	cpsf2	100	85.298	ENSCATG00000030132	CPSF2	100	85.298	Cercocebus_atys
ENSHBUG00000023466	cpsf2	100	85.298	ENSCLAG00000012404	CPSF2	100	85.298	Chinchilla_lanigera
ENSHBUG00000023466	cpsf2	100	85.298	ENSCSAG00000011300	CPSF2	100	85.298	Chlorocebus_sabaeus
ENSHBUG00000023466	cpsf2	100	79.594	ENSCHOG00000012904	CPSF2	100	79.594	Choloepus_hoffmanni
ENSHBUG00000023466	cpsf2	100	85.171	ENSCPBG00000008766	CPSF2	97	85.171	Chrysemys_picta_bellii
ENSHBUG00000023466	cpsf2	100	53.071	ENSCING00000007881	-	100	52.580	Ciona_intestinalis
ENSHBUG00000023466	cpsf2	94	85.676	ENSCANG00000041651	CPSF2	100	85.656	Colobus_angolensis_palliatus
ENSHBUG00000023466	cpsf2	100	84.791	ENSCGRG00001006901	Cpsf2	100	84.791	Cricetulus_griseus_chok1gshd
ENSHBUG00000023466	cpsf2	100	84.791	ENSCGRG00000012416	Cpsf2	100	84.791	Cricetulus_griseus_crigri
ENSHBUG00000023466	cpsf2	100	92.513	ENSCSEG00000004116	cpsf2	100	92.513	Cynoglossus_semilaevis
ENSHBUG00000023466	cpsf2	100	93.393	ENSCVAG00000000095	cpsf2	100	93.393	Cyprinodon_variegatus
ENSHBUG00000023466	cpsf2	100	87.975	ENSDARG00000028971	cpsf2	100	87.975	Danio_rerio
ENSHBUG00000023466	cpsf2	100	85.298	ENSDNOG00000042757	CPSF2	100	85.298	Dasypus_novemcinctus
ENSHBUG00000023466	cpsf2	100	85.298	ENSDORG00000013709	Cpsf2	100	85.298	Dipodomys_ordii
ENSHBUG00000023466	cpsf2	100	53.646	FBgn0027873	Cpsf100	100	53.160	Drosophila_melanogaster
ENSHBUG00000023466	cpsf2	100	77.722	ENSETEG00000012123	CPSF2	100	77.722	Echinops_telfairi
ENSHBUG00000023466	cpsf2	52	77.262	ENSEBUG00000012098	cpsf2	93	77.262	Eptatretus_burgeri
ENSHBUG00000023466	cpsf2	89	90.444	ENSEASG00005021193	CPSF2	100	90.444	Equus_asinus_asinus
ENSHBUG00000023466	cpsf2	100	85.171	ENSECAG00000023935	CPSF2	100	85.171	Equus_caballus
ENSHBUG00000023466	cpsf2	100	88.191	ENSELUG00000008442	cpsf2	100	88.191	Esox_lucius
ENSHBUG00000023466	cpsf2	100	85.171	ENSFCAG00000007886	CPSF2	100	85.171	Felis_catus
ENSHBUG00000023466	cpsf2	100	85.279	ENSFALG00000002412	CPSF2	100	85.279	Ficedula_albicollis
ENSHBUG00000023466	cpsf2	100	85.171	ENSFDAG00000006327	CPSF2	100	85.171	Fukomys_damarensis
ENSHBUG00000023466	cpsf2	96	91.492	ENSFHEG00000015465	cpsf2	98	92.136	Fundulus_heteroclitus
ENSHBUG00000023466	cpsf2	100	89.886	ENSGMOG00000008761	cpsf2	100	89.886	Gadus_morhua
ENSHBUG00000023466	cpsf2	100	86.041	ENSGALG00000010783	CPSF2	100	86.041	Gallus_gallus
ENSHBUG00000023466	cpsf2	100	93.520	ENSGAFG00000001407	cpsf2	100	93.520	Gambusia_affinis
ENSHBUG00000023466	cpsf2	100	94.536	ENSGACG00000008418	cpsf2	100	94.536	Gasterosteus_aculeatus
ENSHBUG00000023466	cpsf2	100	85.044	ENSGAGG00000008287	CPSF2	100	85.044	Gopherus_agassizii
ENSHBUG00000023466	cpsf2	100	85.171	ENSGGOG00000011799	CPSF2	100	85.171	Gorilla_gorilla
ENSHBUG00000023466	cpsf2	100	85.298	ENSHGLG00000018311	CPSF2	100	85.298	Heterocephalus_glaber_female
ENSHBUG00000023466	cpsf2	100	85.298	ENSHGLG00100016460	CPSF2	100	85.298	Heterocephalus_glaber_male
ENSHBUG00000023466	cpsf2	100	92.630	ENSHCOG00000019527	cpsf2	98	92.630	Hippocampus_comes
ENSHBUG00000023466	cpsf2	100	89.861	ENSIPUG00000020857	cpsf2	100	89.861	Ictalurus_punctatus
ENSHBUG00000023466	cpsf2	100	85.298	ENSSTOG00000009528	CPSF2	100	85.298	Ictidomys_tridecemlineatus
ENSHBUG00000023466	cpsf2	100	85.044	ENSJJAG00000017925	Cpsf2	100	85.044	Jaculus_jaculus
ENSHBUG00000023466	cpsf2	100	92.757	ENSKMAG00000019429	cpsf2	100	92.757	Kryptolebias_marmoratus
ENSHBUG00000023466	cpsf2	95	93.423	ENSLBEG00000011585	cpsf2	99	93.423	Labrus_bergylta
ENSHBUG00000023466	cpsf2	100	84.137	ENSLACG00000019024	CPSF2	100	84.137	Latimeria_chalumnae
ENSHBUG00000023466	cpsf2	100	88.875	ENSLOCG00000014102	cpsf2	100	88.875	Lepisosteus_oculatus
ENSHBUG00000023466	cpsf2	100	84.956	ENSLAFG00000004891	CPSF2	100	84.956	Loxodonta_africana
ENSHBUG00000023466	cpsf2	100	85.298	ENSMFAG00000041212	CPSF2	100	85.298	Macaca_fascicularis
ENSHBUG00000023466	cpsf2	100	85.298	ENSMMUG00000000699	CPSF2	100	85.298	Macaca_mulatta
ENSHBUG00000023466	cpsf2	100	85.298	ENSMNEG00000031584	CPSF2	100	85.298	Macaca_nemestrina
ENSHBUG00000023466	cpsf2	100	85.298	ENSMLEG00000029394	CPSF2	100	85.298	Mandrillus_leucophaeus
ENSHBUG00000023466	cpsf2	100	94.917	ENSMAMG00000004235	cpsf2	100	94.917	Mastacembelus_armatus
ENSHBUG00000023466	cpsf2	100	99.873	ENSMZEG00005001769	cpsf2	100	99.873	Maylandia_zebra
ENSHBUG00000023466	cpsf2	100	85.805	ENSMGAG00000013122	CPSF2	100	85.805	Meleagris_gallopavo
ENSHBUG00000023466	cpsf2	100	84.791	ENSMAUG00000015160	Cpsf2	100	84.791	Mesocricetus_auratus
ENSHBUG00000023466	cpsf2	100	85.298	ENSMICG00000016441	CPSF2	100	85.298	Microcebus_murinus
ENSHBUG00000023466	cpsf2	100	84.791	ENSMOCG00000015372	Cpsf2	100	84.791	Microtus_ochrogaster
ENSHBUG00000023466	cpsf2	100	87.675	ENSMMOG00000015590	cpsf2	100	87.802	Mola_mola
ENSHBUG00000023466	cpsf2	100	85.298	ENSMODG00000002042	CPSF2	100	85.298	Monodelphis_domestica
ENSHBUG00000023466	cpsf2	100	91.105	ENSMALG00000022275	cpsf2	100	91.105	Monopterus_albus
ENSHBUG00000023466	cpsf2	100	84.918	ENSMUSG00000041781	Cpsf2	100	84.918	Mus_musculus
ENSHBUG00000023466	cpsf2	100	84.791	MGP_PahariEiJ_G0029791	Cpsf2	100	84.791	Mus_pahari
ENSHBUG00000023466	cpsf2	100	84.918	MGP_SPRETEiJ_G0018877	Cpsf2	100	84.918	Mus_spretus
ENSHBUG00000023466	cpsf2	100	85.425	ENSMPUG00000007617	CPSF2	98	85.425	Mustela_putorius_furo
ENSHBUG00000023466	cpsf2	100	85.171	ENSMLUG00000005570	CPSF2	100	85.171	Myotis_lucifugus
ENSHBUG00000023466	cpsf2	100	85.044	ENSNGAG00000020312	Cpsf2	100	85.044	Nannospalax_galili
ENSHBUG00000023466	cpsf2	100	99.365	ENSNBRG00000022402	cpsf2	100	99.365	Neolamprologus_brichardi
ENSHBUG00000023466	cpsf2	100	84.411	ENSNLEG00000017132	CPSF2	100	84.411	Nomascus_leucogenys
ENSHBUG00000023466	cpsf2	91	93.204	ENSMEUG00000008138	CPSF2	91	93.204	Notamacropus_eugenii
ENSHBUG00000023466	cpsf2	86	89.037	ENSOPRG00000008484	-	92	89.037	Ochotona_princeps
ENSHBUG00000023466	cpsf2	100	85.171	ENSODEG00000008682	CPSF2	100	85.171	Octodon_degus
ENSHBUG00000023466	cpsf2	100	98.221	ENSONIG00000005901	cpsf2	100	98.221	Oreochromis_niloticus
ENSHBUG00000023466	cpsf2	100	85.551	ENSOANG00000003822	CPSF2	100	85.551	Ornithorhynchus_anatinus
ENSHBUG00000023466	cpsf2	100	85.044	ENSOCUG00000005713	CPSF2	100	85.044	Oryctolagus_cuniculus
ENSHBUG00000023466	cpsf2	100	86.277	ENSORLG00000011628	cpsf2	100	86.277	Oryzias_latipes
ENSHBUG00000023466	cpsf2	100	91.995	ENSORLG00020016980	cpsf2	100	91.995	Oryzias_latipes_hni
ENSHBUG00000023466	cpsf2	100	91.995	ENSORLG00015011910	cpsf2	100	91.995	Oryzias_latipes_hsok
ENSHBUG00000023466	cpsf2	100	92.259	ENSOMEG00000022876	cpsf2	100	92.386	Oryzias_melastigma
ENSHBUG00000023466	cpsf2	100	82.301	ENSOARG00000012889	CPSF2	100	82.301	Ovis_aries
ENSHBUG00000023466	cpsf2	100	85.171	ENSPPAG00000039666	CPSF2	100	85.171	Pan_paniscus
ENSHBUG00000023466	cpsf2	99	85.152	ENSPPRG00000010869	CPSF2	100	85.152	Panthera_pardus
ENSHBUG00000023466	cpsf2	100	85.171	ENSPTIG00000021202	CPSF2	100	85.171	Panthera_tigris_altaica
ENSHBUG00000023466	cpsf2	100	85.171	ENSPTRG00000006651	CPSF2	100	85.171	Pan_troglodytes
ENSHBUG00000023466	cpsf2	100	85.298	ENSPANG00000017417	CPSF2	100	85.298	Papio_anubis
ENSHBUG00000023466	cpsf2	100	84.537	ENSPKIG00000021453	cpsf2	100	84.537	Paramormyrops_kingsleyae
ENSHBUG00000023466	cpsf2	100	84.664	ENSPSIG00000006289	CPSF2	100	84.664	Pelodiscus_sinensis
ENSHBUG00000023466	cpsf2	76	87.188	ENSPMGG00000002511	cpsf2	99	88.167	Periophthalmus_magnuspinnatus
ENSHBUG00000023466	cpsf2	100	84.918	ENSPEMG00000007917	Cpsf2	100	84.918	Peromyscus_maniculatus_bairdii
ENSHBUG00000023466	cpsf2	100	72.898	ENSPMAG00000006205	cpsf2	100	72.682	Petromyzon_marinus
ENSHBUG00000023466	cpsf2	100	85.298	ENSPCIG00000011393	CPSF2	100	85.298	Phascolarctos_cinereus
ENSHBUG00000023466	cpsf2	100	93.520	ENSPFOG00000018648	cpsf2	100	93.520	Poecilia_formosa
ENSHBUG00000023466	cpsf2	100	93.520	ENSPLAG00000019199	cpsf2	99	93.520	Poecilia_latipinna
ENSHBUG00000023466	cpsf2	96	93.527	ENSPMEG00000012100	cpsf2	99	93.423	Poecilia_mexicana
ENSHBUG00000023466	cpsf2	100	93.139	ENSPREG00000008960	cpsf2	100	93.139	Poecilia_reticulata
ENSHBUG00000023466	cpsf2	64	80.915	ENSPPYG00000029685	-	100	80.915	Pongo_abelii
ENSHBUG00000023466	cpsf2	100	85.171	ENSPCAG00000012477	CPSF2	100	85.171	Procavia_capensis
ENSHBUG00000023466	cpsf2	100	85.425	ENSPCOG00000026387	CPSF2	100	85.425	Propithecus_coquereli
ENSHBUG00000023466	cpsf2	64	91.327	ENSPVAG00000004223	CPSF2	65	91.327	Pteropus_vampyrus
ENSHBUG00000023466	cpsf2	100	99.239	ENSPNYG00000023356	cpsf2	100	99.239	Pundamilia_nyererei
ENSHBUG00000023466	cpsf2	100	90.368	ENSPNAG00000001849	cpsf2	100	90.368	Pygocentrus_nattereri
ENSHBUG00000023466	cpsf2	100	84.918	ENSRNOG00000005733	Cpsf2	100	84.918	Rattus_norvegicus
ENSHBUG00000023466	cpsf2	100	85.298	ENSRBIG00000044792	CPSF2	100	85.298	Rhinopithecus_bieti
ENSHBUG00000023466	cpsf2	100	85.298	ENSRROG00000034875	CPSF2	100	85.298	Rhinopithecus_roxellana
ENSHBUG00000023466	cpsf2	100	85.298	ENSSBOG00000024571	CPSF2	100	85.298	Saimiri_boliviensis_boliviensis
ENSHBUG00000023466	cpsf2	100	85.298	ENSSHAG00000010458	CPSF2	100	85.298	Sarcophilus_harrisii
ENSHBUG00000023466	cpsf2	100	90.621	ENSSFOG00015002117	cpsf2	100	90.875	Scleropages_formosus
ENSHBUG00000023466	cpsf2	100	93.274	ENSSMAG00000002001	cpsf2	100	93.909	Scophthalmus_maximus
ENSHBUG00000023466	cpsf2	100	95.299	ENSSDUG00000004084	cpsf2	100	95.299	Seriola_dumerili
ENSHBUG00000023466	cpsf2	100	94.917	ENSSLDG00000024330	cpsf2	100	94.917	Seriola_lalandi_dorsalis
ENSHBUG00000023466	cpsf2	58	95.050	ENSSARG00000009784	-	63	95.050	Sorex_araneus
ENSHBUG00000023466	cpsf2	100	84.918	ENSSPUG00000013485	CPSF2	100	84.918	Sphenodon_punctatus
ENSHBUG00000023466	cpsf2	100	95.044	ENSSPAG00000013284	cpsf2	100	95.044	Stegastes_partitus
ENSHBUG00000023466	cpsf2	100	85.044	ENSSSCG00000002447	CPSF2	100	85.044	Sus_scrofa
ENSHBUG00000023466	cpsf2	100	85.406	ENSTGUG00000012571	-	100	85.406	Taeniopygia_guttata
ENSHBUG00000023466	cpsf2	100	92.249	ENSTRUG00000003742	cpsf2	100	92.249	Takifugu_rubripes
ENSHBUG00000023466	cpsf2	100	91.001	ENSTNIG00000012228	cpsf2	100	92.015	Tetraodon_nigroviridis
ENSHBUG00000023466	cpsf2	91	83.478	ENSTBEG00000004530	CPSF2	94	83.478	Tupaia_belangeri
ENSHBUG00000023466	cpsf2	88	83.846	ENSTTRG00000008697	CPSF2	88	83.846	Tursiops_truncatus
ENSHBUG00000023466	cpsf2	100	85.298	ENSUAMG00000028071	CPSF2	100	85.298	Ursus_americanus
ENSHBUG00000023466	cpsf2	100	85.298	ENSUMAG00000005029	CPSF2	99	90.338	Ursus_maritimus
ENSHBUG00000023466	cpsf2	99	85.152	ENSVPAG00000003503	CPSF2	100	85.152	Vicugna_pacos
ENSHBUG00000023466	cpsf2	100	85.171	ENSVVUG00000024642	CPSF2	100	85.171	Vulpes_vulpes
ENSHBUG00000023466	cpsf2	100	84.157	ENSXETG00000010289	cpsf2	100	84.157	Xenopus_tropicalis
ENSHBUG00000023466	cpsf2	100	93.139	ENSXCOG00000001764	cpsf2	100	93.139	Xiphophorus_couchianus
ENSHBUG00000023466	cpsf2	100	93.774	ENSXMAG00000017048	cpsf2	100	93.774	Xiphophorus_maculatus