EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000023625 (Gene tree)
Gene ID: 102309404
Gene Symbol: nop53
Alias: fb60b03|gltscr2|wu:fb60b03|zgc:123178
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 10958 bases
Position: chrJH425401.1:448607-459564
Accession: 102309404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000035427	Nop53	PF07767.11	1.3e-95	1	1
ENSHBUP00000035415	Nop53	PF07767.11	1.4e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031085	-	1326	-	ENSHBUP00000035415	441 (aa)	-	-
ENSHBUT00000031100	-	4167	XM_005926585	ENSHBUP00000035427	464 (aa)	XP_005926647	UPI0003BC98FE

Gene Model

Click here to download ENSHBUG00000023625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023625's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023625	nop53	97	47.084	ENSG00000105373	NOP53	99	67.857	Homo_sapiens
ENSHBUG00000023625	nop53	100	78.879	ENSAPOG00000006446	nop53	100	79.095	Acanthochromis_polyacanthus
ENSHBUG00000023625	nop53	97	44.628	ENSAMEG00000015214	NOP53	88	44.543	Ailuropoda_melanoleuca
ENSHBUG00000023625	nop53	76	82.687	ENSACIG00000002467	nop53	96	82.090	Amphilophus_citrinellus
ENSHBUG00000023625	nop53	100	80.172	ENSAOCG00000007002	nop53	100	80.172	Amphiprion_ocellaris
ENSHBUG00000023625	nop53	100	80.388	ENSAPEG00000024564	nop53	100	80.388	Amphiprion_percula
ENSHBUG00000023625	nop53	96	77.130	ENSATEG00000021860	nop53	100	77.578	Anabas_testudineus
ENSHBUG00000023625	nop53	59	56.089	ENSACAG00000011362	-	92	56.089	Anolis_carolinensis
ENSHBUG00000023625	nop53	92	44.091	ENSANAG00000007933	NOP53	93	43.590	Aotus_nancymaae
ENSHBUG00000023625	nop53	100	99.138	ENSACLG00000011832	nop53	100	99.138	Astatotilapia_calliptera
ENSHBUG00000023625	nop53	97	60.220	ENSAMXG00000014883	nop53	99	60.600	Astyanax_mexicanus
ENSHBUG00000023625	nop53	97	45.992	ENSBTAG00000021192	NOP53	87	43.617	Bos_taurus
ENSHBUG00000023625	nop53	97	46.497	ENSCJAG00000011385	NOP53	88	47.796	Callithrix_jacchus
ENSHBUG00000023625	nop53	97	46.170	ENSCAFG00000004080	NOP53	88	47.442	Canis_familiaris
ENSHBUG00000023625	nop53	97	46.596	ENSCHIG00000009393	NOP53	96	43.991	Capra_hircus
ENSHBUG00000023625	nop53	97	41.667	ENSTSYG00000036631	NOP53	86	41.920	Carlito_syrichta
ENSHBUG00000023625	nop53	83	46.829	ENSCAPG00000013148	NOP53	99	45.742	Cavia_aperea
ENSHBUG00000023625	nop53	97	46.624	ENSCPOG00000015665	NOP53	88	46.667	Cavia_porcellus
ENSHBUG00000023625	nop53	97	46.452	ENSCCAG00000025477	NOP53	87	47.156	Cebus_capucinus
ENSHBUG00000023625	nop53	97	46.652	ENSCATG00000032842	NOP53	87	47.518	Cercocebus_atys
ENSHBUG00000023625	nop53	97	46.368	ENSCLAG00000001860	NOP53	88	47.664	Chinchilla_lanigera
ENSHBUG00000023625	nop53	97	46.436	ENSCSAG00000002928	NOP53	87	47.281	Chlorocebus_sabaeus
ENSHBUG00000023625	nop53	85	52.088	ENSCPBG00000009047	NOP53	94	51.597	Chrysemys_picta_bellii
ENSHBUG00000023625	nop53	89	34.660	ENSCING00000021395	-	96	34.346	Ciona_intestinalis
ENSHBUG00000023625	nop53	89	34.732	ENSCSAVG00000006009	-	95	34.732	Ciona_savignyi
ENSHBUG00000023625	nop53	97	45.119	ENSCANG00000039648	NOP53	86	45.564	Colobus_angolensis_palliatus
ENSHBUG00000023625	nop53	97	45.532	ENSCGRG00001019033	Nop53	88	46.370	Cricetulus_griseus_chok1gshd
ENSHBUG00000023625	nop53	100	66.379	ENSCSEG00000014834	nop53	100	65.733	Cynoglossus_semilaevis
ENSHBUG00000023625	nop53	100	76.496	ENSCVAG00000005940	nop53	100	76.496	Cyprinodon_variegatus
ENSHBUG00000023625	nop53	99	63.871	ENSDARG00000100452	nop53	99	63.034	Danio_rerio
ENSHBUG00000023625	nop53	97	45.860	ENSDNOG00000005165	NOP53	79	47.018	Dasypus_novemcinctus
ENSHBUG00000023625	nop53	57	44.000	ENSDORG00000016339	-	79	45.957	Dipodomys_ordii
ENSHBUG00000023625	nop53	90	31.910	FBgn0030061	CG1785	55	32.443	Drosophila_melanogaster
ENSHBUG00000023625	nop53	93	44.419	ENSEBUG00000012747	nop53	90	43.262	Eptatretus_burgeri
ENSHBUG00000023625	nop53	97	46.452	ENSEASG00005004345	NOP53	91	44.156	Equus_asinus_asinus
ENSHBUG00000023625	nop53	97	45.842	ENSECAG00000026850	NOP53	91	42.766	Equus_caballus
ENSHBUG00000023625	nop53	97	41.075	ENSEEUG00000005287	NOP53	87	41.882	Erinaceus_europaeus
ENSHBUG00000023625	nop53	100	64.655	ENSELUG00000001525	nop53	100	64.009	Esox_lucius
ENSHBUG00000023625	nop53	97	46.203	ENSFCAG00000010861	NOP53	88	47.113	Felis_catus
ENSHBUG00000023625	nop53	97	42.391	ENSFDAG00000010478	NOP53	86	41.568	Fukomys_damarensis
ENSHBUG00000023625	nop53	100	77.849	ENSFHEG00000017763	nop53	97	77.849	Fundulus_heteroclitus
ENSHBUG00000023625	nop53	100	62.284	ENSGMOG00000014299	nop53	100	61.638	Gadus_morhua
ENSHBUG00000023625	nop53	97	46.737	ENSGALG00000039473	NOP53	70	48.848	Gallus_gallus
ENSHBUG00000023625	nop53	99	75.647	ENSGAFG00000013301	nop53	98	75.647	Gambusia_affinis
ENSHBUG00000023625	nop53	100	66.237	ENSGACG00000005766	nop53	100	66.379	Gasterosteus_aculeatus
ENSHBUG00000023625	nop53	97	42.733	ENSGGOG00000024728	-	87	42.824	Gorilla_gorilla
ENSHBUG00000023625	nop53	97	45.140	ENSGGOG00000005462	NOP53	87	45.863	Gorilla_gorilla
ENSHBUG00000023625	nop53	97	45.416	ENSHGLG00000018240	NOP53	88	46.512	Heterocephalus_glaber_female
ENSHBUG00000023625	nop53	80	59.821	ENSHGLG00100015613	NOP53	80	60.377	Heterocephalus_glaber_male
ENSHBUG00000023625	nop53	100	71.281	ENSHCOG00000017133	nop53	100	71.281	Hippocampus_comes
ENSHBUG00000023625	nop53	99	64.301	ENSIPUG00000008154	nop53	88	64.301	Ictalurus_punctatus
ENSHBUG00000023625	nop53	97	46.253	ENSSTOG00000022092	NOP53	87	47.775	Ictidomys_tridecemlineatus
ENSHBUG00000023625	nop53	97	43.404	ENSJJAG00000007854	Nop53	88	46.512	Jaculus_jaculus
ENSHBUG00000023625	nop53	96	77.528	ENSKMAG00000020756	nop53	100	77.528	Kryptolebias_marmoratus
ENSHBUG00000023625	nop53	99	74.242	ENSLBEG00000011432	nop53	99	74.675	Labrus_bergylta
ENSHBUG00000023625	nop53	85	51.429	ENSLACG00000018320	NOP53	99	50.617	Latimeria_chalumnae
ENSHBUG00000023625	nop53	100	57.419	ENSLOCG00000014178	nop53	100	57.419	Lepisosteus_oculatus
ENSHBUG00000023625	nop53	97	46.436	ENSMFAG00000045103	NOP53	87	47.518	Macaca_fascicularis
ENSHBUG00000023625	nop53	97	46.652	ENSMMUG00000013348	NOP53	99	67.857	Macaca_mulatta
ENSHBUG00000023625	nop53	97	46.652	ENSMNEG00000042540	NOP53	84	47.518	Macaca_nemestrina
ENSHBUG00000023625	nop53	97	40.899	ENSMLEG00000032475	NOP53	87	41.121	Mandrillus_leucophaeus
ENSHBUG00000023625	nop53	99	77.088	ENSMAMG00000012652	nop53	99	77.944	Mastacembelus_armatus
ENSHBUG00000023625	nop53	100	95.011	ENSMZEG00005005033	nop53	100	95.011	Maylandia_zebra
ENSHBUG00000023625	nop53	97	46.667	ENSMAUG00000012617	Nop53	87	47.765	Mesocricetus_auratus
ENSHBUG00000023625	nop53	91	46.205	ENSMICG00000005580	NOP53	92	45.872	Microcebus_murinus
ENSHBUG00000023625	nop53	97	47.186	ENSMOCG00000008367	Nop53	88	48.104	Microtus_ochrogaster
ENSHBUG00000023625	nop53	100	72.961	ENSMMOG00000006515	nop53	100	73.820	Mola_mola
ENSHBUG00000023625	nop53	89	48.341	ENSMODG00000008721	NOP53	81	47.991	Monodelphis_domestica
ENSHBUG00000023625	nop53	100	77.586	ENSMALG00000020350	nop53	96	77.802	Monopterus_albus
ENSHBUG00000023625	nop53	97	46.581	MGP_CAROLIEiJ_G0029218	Nop53	88	47.664	Mus_caroli
ENSHBUG00000023625	nop53	97	46.581	ENSMUSG00000041560	Nop53	88	47.454	Mus_musculus
ENSHBUG00000023625	nop53	86	46.265	MGP_PahariEiJ_G0021074	-	95	45.542	Mus_pahari
ENSHBUG00000023625	nop53	97	46.154	MGP_SPRETEiJ_G0030298	Nop53	88	46.759	Mus_spretus
ENSHBUG00000023625	nop53	97	46.596	ENSMPUG00000004456	NOP53	88	48.140	Mustela_putorius_furo
ENSHBUG00000023625	nop53	53	61.607	ENSMLUG00000027066	-	99	50.376	Myotis_lucifugus
ENSHBUG00000023625	nop53	97	46.567	ENSNGAG00000019894	Nop53	88	47.393	Nannospalax_galili
ENSHBUG00000023625	nop53	96	87.191	ENSNBRG00000002057	nop53	93	87.133	Neolamprologus_brichardi
ENSHBUG00000023625	nop53	70	67.797	ENSNLEG00000028326	-	89	37.940	Nomascus_leucogenys
ENSHBUG00000023625	nop53	97	46.652	ENSNLEG00000003143	NOP53	87	47.518	Nomascus_leucogenys
ENSHBUG00000023625	nop53	80	40.556	ENSMEUG00000002525	-	99	40.669	Notamacropus_eugenii
ENSHBUG00000023625	nop53	97	45.319	ENSODEG00000006707	NOP53	88	47.442	Octodon_degus
ENSHBUG00000023625	nop53	100	96.774	ENSONIG00000016624	nop53	100	96.774	Oreochromis_niloticus
ENSHBUG00000023625	nop53	100	70.601	ENSORLG00000008659	nop53	100	70.386	Oryzias_latipes
ENSHBUG00000023625	nop53	100	67.811	ENSORLG00020019916	nop53	97	67.382	Oryzias_latipes_hni
ENSHBUG00000023625	nop53	100	73.548	ENSORLG00015001315	nop53	100	73.548	Oryzias_latipes_hsok
ENSHBUG00000023625	nop53	98	73.904	ENSOMEG00000018244	nop53	100	74.090	Oryzias_melastigma
ENSHBUG00000023625	nop53	97	70.149	ENSOGAG00000024300	NOP53	89	42.008	Otolemur_garnettii
ENSHBUG00000023625	nop53	97	34.728	ENSOARG00000011414	NOP53	96	32.627	Ovis_aries
ENSHBUG00000023625	nop53	97	42.796	ENSPPAG00000029337	-	87	42.118	Pan_paniscus
ENSHBUG00000023625	nop53	97	45.356	ENSPPAG00000002927	-	87	46.099	Pan_paniscus
ENSHBUG00000023625	nop53	97	40.476	ENSPPAG00000032995	-	86	40.995	Pan_paniscus
ENSHBUG00000023625	nop53	97	45.781	ENSPPRG00000008954	NOP53	88	46.651	Panthera_pardus
ENSHBUG00000023625	nop53	97	46.652	ENSPTRG00000011215	NOP53	87	47.518	Pan_troglodytes
ENSHBUG00000023625	nop53	97	43.011	ENSPTRG00000052493	-	87	42.353	Pan_troglodytes
ENSHBUG00000023625	nop53	97	43.290	ENSPTRG00000043520	-	87	43.839	Pan_troglodytes
ENSHBUG00000023625	nop53	97	46.652	ENSPANG00000002964	NOP53	87	47.518	Papio_anubis
ENSHBUG00000023625	nop53	99	61.028	ENSPKIG00000000127	nop53	99	61.638	Paramormyrops_kingsleyae
ENSHBUG00000023625	nop53	100	73.191	ENSPMGG00000021579	nop53	100	72.766	Periophthalmus_magnuspinnatus
ENSHBUG00000023625	nop53	97	47.034	ENSPEMG00000006856	Nop53	88	47.685	Peromyscus_maniculatus_bairdii
ENSHBUG00000023625	nop53	50	43.515	ENSPMAG00000001501	-	88	45.000	Petromyzon_marinus
ENSHBUG00000023625	nop53	91	44.240	ENSPCIG00000016718	NOP53	89	46.118	Phascolarctos_cinereus
ENSHBUG00000023625	nop53	100	76.282	ENSPFOG00000002839	nop53	100	76.923	Poecilia_formosa
ENSHBUG00000023625	nop53	62	75.261	ENSPLAG00000009285	-	89	75.261	Poecilia_latipinna
ENSHBUG00000023625	nop53	100	76.282	ENSPLAG00000006675	nop53	100	76.923	Poecilia_latipinna
ENSHBUG00000023625	nop53	62	75.261	ENSPMEG00000006978	nop53	89	75.261	Poecilia_mexicana
ENSHBUG00000023625	nop53	100	75.107	ENSPMEG00000009589	nop53	100	76.609	Poecilia_mexicana
ENSHBUG00000023625	nop53	100	70.968	ENSPREG00000008711	nop53	100	70.538	Poecilia_reticulata
ENSHBUG00000023625	nop53	97	43.991	ENSPPYG00000010181	NOP53	87	44.235	Pongo_abelii
ENSHBUG00000023625	nop53	99	44.000	ENSPCAG00000007692	NOP53	89	45.390	Procavia_capensis
ENSHBUG00000023625	nop53	80	58.036	ENSPCOG00000016124	NOP53	86	41.805	Propithecus_coquereli
ENSHBUG00000023625	nop53	81	49.810	ENSPVAG00000014671	NOP53	54	49.810	Pteropus_vampyrus
ENSHBUG00000023625	nop53	100	99.569	ENSPNYG00000001341	nop53	100	99.569	Pundamilia_nyererei
ENSHBUG00000023625	nop53	99	62.446	ENSPNAG00000012520	nop53	99	61.864	Pygocentrus_nattereri
ENSHBUG00000023625	nop53	96	47.210	ENSRNOG00000013023	Nop53	88	48.244	Rattus_norvegicus
ENSHBUG00000023625	nop53	97	46.652	ENSRBIG00000036427	NOP53	87	47.991	Rhinopithecus_bieti
ENSHBUG00000023625	nop53	97	46.652	ENSRROG00000042298	NOP53	88	47.991	Rhinopithecus_roxellana
ENSHBUG00000023625	nop53	97	47.300	ENSSBOG00000033115	NOP53	87	48.463	Saimiri_boliviensis_boliviensis
ENSHBUG00000023625	nop53	85	45.926	ENSSHAG00000002239	NOP53	99	45.926	Sarcophilus_harrisii
ENSHBUG00000023625	nop53	100	61.207	ENSSFOG00015007062	gltscr2	100	61.242	Scleropages_formosus
ENSHBUG00000023625	nop53	100	74.090	ENSSMAG00000000212	nop53	100	74.090	Scophthalmus_maximus
ENSHBUG00000023625	nop53	100	78.664	ENSSDUG00000010575	nop53	100	79.095	Seriola_dumerili
ENSHBUG00000023625	nop53	100	75.862	ENSSLDG00000000140	nop53	97	76.293	Seriola_lalandi_dorsalis
ENSHBUG00000023625	nop53	76	47.384	ENSSARG00000014109	NOP53	72	46.802	Sorex_araneus
ENSHBUG00000023625	nop53	88	44.389	ENSSPUG00000004420	NOP53	80	46.260	Sphenodon_punctatus
ENSHBUG00000023625	nop53	100	78.925	ENSSPAG00000000318	nop53	100	78.925	Stegastes_partitus
ENSHBUG00000023625	nop53	97	45.752	ENSSSCG00000022774	NOP53	87	46.778	Sus_scrofa
ENSHBUG00000023625	nop53	100	74.353	ENSTRUG00000004944	nop53	100	74.353	Takifugu_rubripes
ENSHBUG00000023625	nop53	54	76.892	ENSTNIG00000014330	nop53	95	76.892	Tetraodon_nigroviridis
ENSHBUG00000023625	nop53	75	59.292	ENSTBEG00000008708	NOP53	63	59.434	Tupaia_belangeri
ENSHBUG00000023625	nop53	97	46.512	ENSTTRG00000011831	NOP53	88	47.575	Tursiops_truncatus
ENSHBUG00000023625	nop53	97	44.468	ENSUAMG00000028254	NOP53	88	46.047	Ursus_americanus
ENSHBUG00000023625	nop53	75	42.742	ENSVVUG00000023365	NOP53	61	44.337	Vulpes_vulpes
ENSHBUG00000023625	nop53	94	58.036	ENSXETG00000002782	nop53	99	48.596	Xenopus_tropicalis
ENSHBUG00000023625	nop53	100	75.431	ENSXCOG00000004436	nop53	100	75.431	Xiphophorus_couchianus
ENSHBUG00000023625	nop53	100	75.914	ENSXMAG00000002589	nop53	100	75.914	Xiphophorus_maculatus