EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000023659 (Gene tree)
Gene ID: 102314178
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5190 bases
Position: chrJH425522.1:151656-156845
Accession: 102314178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000035471	RRM_1	PF00076.22	1.1e-10	1	1
ENSHBUP00000021363	RRM_1	PF00076.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031186	-	1984	XM_005936260	ENSHBUP00000035471	350 (aa)	XP_005936322	UPI0003BC60DB
ENSHBUT00000036352	-	2113	-	ENSHBUP00000021363	393 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000023659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023659	nelfe	99	69.253	ENSG00000204356	NELFE	91	74.483	Homo_sapiens
ENSHBUG00000023659	nelfe	99	91.092	ENSAPEG00000001209	nelfe	100	91.092	Amphiprion_percula
ENSHBUG00000023659	nelfe	100	97.207	ENSACLG00000006848	nelfe	100	97.207	Astatotilapia_calliptera
ENSHBUG00000023659	nelfe	99	78.082	ENSAMXG00000011495	nelfe	99	78.356	Astyanax_mexicanus
ENSHBUG00000023659	nelfe	100	87.714	ENSCVAG00000003087	nelfe	100	87.714	Cyprinodon_variegatus
ENSHBUG00000023659	nelfe	99	83.143	ENSDARG00000004343	nelfe	100	82.184	Danio_rerio
ENSHBUG00000023659	nelfe	99	48.851	ENSEBUG00000017070	nelfe	94	63.816	Eptatretus_burgeri
ENSHBUG00000023659	nelfe	65	78.049	ENSEEUG00000005004	NELFE	59	78.049	Erinaceus_europaeus
ENSHBUG00000023659	nelfe	99	58.046	ENSHGLG00100014073	NELFE	91	57.231	Heterocephalus_glaber_male
ENSHBUG00000023659	nelfe	99	67.391	ENSMNEG00000032542	NELFE	98	67.120	Macaca_nemestrina
ENSHBUG00000023659	nelfe	100	97.207	ENSMZEG00005026412	nelfe	100	97.207	Maylandia_zebra
ENSHBUG00000023659	nelfe	75	68.182	ENSMGAG00000001297	NELFE	70	73.529	Meleagris_gallopavo
ENSHBUG00000023659	nelfe	99	57.184	ENSMODG00000015063	NELFE	85	73.103	Monodelphis_domestica
ENSHBUG00000023659	nelfe	100	95.480	ENSNBRG00000018756	nelfe	100	95.480	Neolamprologus_brichardi
ENSHBUG00000023659	nelfe	99	62.963	ENSOPRG00000003942	NELFE	98	66.931	Ochotona_princeps
ENSHBUG00000023659	nelfe	99	85.387	ENSONIG00000013513	nelfe	100	97.472	Oreochromis_niloticus
ENSHBUG00000023659	nelfe	65	61.355	ENSPCAG00000004108	NELFE	66	57.769	Procavia_capensis
ENSHBUG00000023659	nelfe	100	99.143	ENSPNYG00000017837	nelfe	100	99.143	Pundamilia_nyererei
ENSHBUG00000023659	nelfe	99	59.511	ENSXETG00000010931	nelfe	72	75.862	Xenopus_tropicalis