EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000023728 (Gene tree)
Gene ID: 102289698
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 7221 bases
Position: chrJH426244.1:44105-51325
Accession: 102289698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000035516	PseudoU_synth_2	PF00849.22	7.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031256	-	2279	XM_005950863	ENSHBUP00000035516	311 (aa)	XP_005950925	UPI0003AF963A

Gene Model

Click here to download ENSHBUG00000023728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023728	rpusd1	98	57.282	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSHBUG00000023728	rpusd1	100	82.315	ENSAPOG00000022221	rpusd1	99	83.601	Acanthochromis_polyacanthus
ENSHBUG00000023728	rpusd1	98	58.632	ENSAMEG00000007461	RPUSD1	98	57.097	Ailuropoda_melanoleuca
ENSHBUG00000023728	rpusd1	100	90.675	ENSACIG00000015863	rpusd1	100	90.675	Amphilophus_citrinellus
ENSHBUG00000023728	rpusd1	100	83.601	ENSAOCG00000021975	rpusd1	97	84.244	Amphiprion_ocellaris
ENSHBUG00000023728	rpusd1	100	83.923	ENSAPEG00000001316	rpusd1	97	84.566	Amphiprion_percula
ENSHBUG00000023728	rpusd1	100	83.601	ENSATEG00000002984	rpusd1	99	84.244	Anabas_testudineus
ENSHBUG00000023728	rpusd1	77	59.259	ENSAPLG00000012316	RPUSD1	98	59.259	Anas_platyrhynchos
ENSHBUG00000023728	rpusd1	98	63.399	ENSACAG00000008953	RPUSD1	99	63.399	Anolis_carolinensis
ENSHBUG00000023728	rpusd1	98	57.655	ENSANAG00000024709	RPUSD1	81	65.217	Aotus_nancymaae
ENSHBUG00000023728	rpusd1	100	99.678	ENSACLG00000013692	rpusd1	100	99.678	Astatotilapia_calliptera
ENSHBUG00000023728	rpusd1	99	69.481	ENSAMXG00000019802	rpusd1	99	67.097	Astyanax_mexicanus
ENSHBUG00000023728	rpusd1	98	60.261	ENSBTAG00000000179	RPUSD1	82	67.984	Bos_taurus
ENSHBUG00000023728	rpusd1	98	57.329	ENSCJAG00000012253	RPUSD1	98	57.468	Callithrix_jacchus
ENSHBUG00000023728	rpusd1	98	57.655	ENSCAFG00000019614	RPUSD1	98	57.097	Canis_familiaris
ENSHBUG00000023728	rpusd1	98	57.655	ENSCAFG00020008891	RPUSD1	98	57.097	Canis_lupus_dingo
ENSHBUG00000023728	rpusd1	98	60.586	ENSCHIG00000012872	RPUSD1	98	58.307	Capra_hircus
ENSHBUG00000023728	rpusd1	98	56.352	ENSTSYG00000036934	RPUSD1	98	56.352	Carlito_syrichta
ENSHBUG00000023728	rpusd1	98	57.655	ENSCAPG00000014219	RPUSD1	83	65.217	Cavia_aperea
ENSHBUG00000023728	rpusd1	98	57.655	ENSCPOG00000034604	RPUSD1	83	65.217	Cavia_porcellus
ENSHBUG00000023728	rpusd1	98	57.329	ENSCCAG00000034385	RPUSD1	81	64.822	Cebus_capucinus
ENSHBUG00000023728	rpusd1	98	57.929	ENSCATG00000042983	RPUSD1	98	58.252	Cercocebus_atys
ENSHBUG00000023728	rpusd1	98	57.329	ENSCLAG00000013966	RPUSD1	83	65.613	Chinchilla_lanigera
ENSHBUG00000023728	rpusd1	98	57.605	ENSCSAG00000012121	RPUSD1	98	57.929	Chlorocebus_sabaeus
ENSHBUG00000023728	rpusd1	98	62.092	ENSCPBG00000021101	RPUSD1	99	62.092	Chrysemys_picta_bellii
ENSHBUG00000023728	rpusd1	81	65.217	ENSCANG00000028576	RPUSD1	90	65.217	Colobus_angolensis_palliatus
ENSHBUG00000023728	rpusd1	98	56.818	ENSCGRG00001014253	Rpusd1	98	56.090	Cricetulus_griseus_chok1gshd
ENSHBUG00000023728	rpusd1	98	56.818	ENSCGRG00000017995	Rpusd1	98	56.090	Cricetulus_griseus_crigri
ENSHBUG00000023728	rpusd1	98	81.311	ENSCSEG00000018512	rpusd1	98	81.311	Cynoglossus_semilaevis
ENSHBUG00000023728	rpusd1	100	80.064	ENSCVAG00000022746	rpusd1	100	80.064	Cyprinodon_variegatus
ENSHBUG00000023728	rpusd1	98	70.915	ENSDARG00000060192	rpusd1	99	67.647	Danio_rerio
ENSHBUG00000023728	rpusd1	98	57.003	ENSDNOG00000003721	RPUSD1	98	57.003	Dasypus_novemcinctus
ENSHBUG00000023728	rpusd1	98	57.655	ENSDORG00000026656	Rpusd1	98	59.283	Dipodomys_ordii
ENSHBUG00000023728	rpusd1	96	46.032	ENSEBUG00000008767	rpusd1	79	52.490	Eptatretus_burgeri
ENSHBUG00000023728	rpusd1	99	58.521	ENSEASG00005018421	RPUSD1	61	66.667	Equus_asinus_asinus
ENSHBUG00000023728	rpusd1	100	70.096	ENSELUG00000014307	rpusd1	90	71.383	Esox_lucius
ENSHBUG00000023728	rpusd1	98	58.306	ENSFCAG00000010359	RPUSD1	98	57.655	Felis_catus
ENSHBUG00000023728	rpusd1	98	63.072	ENSFALG00000003211	RPUSD1	99	61.981	Ficedula_albicollis
ENSHBUG00000023728	rpusd1	98	57.655	ENSFDAG00000013398	RPUSD1	98	55.380	Fukomys_damarensis
ENSHBUG00000023728	rpusd1	100	79.421	ENSFHEG00000004736	rpusd1	100	79.743	Fundulus_heteroclitus
ENSHBUG00000023728	rpusd1	99	73.482	ENSGMOG00000010756	rpusd1	99	73.482	Gadus_morhua
ENSHBUG00000023728	rpusd1	98	62.745	ENSGALG00000005315	RPUSD1	99	62.745	Gallus_gallus
ENSHBUG00000023728	rpusd1	100	78.457	ENSGAFG00000009886	rpusd1	100	78.457	Gambusia_affinis
ENSHBUG00000023728	rpusd1	100	81.029	ENSGACG00000014276	rpusd1	100	83.923	Gasterosteus_aculeatus
ENSHBUG00000023728	rpusd1	98	61.438	ENSGAGG00000004181	RPUSD1	99	61.438	Gopherus_agassizii
ENSHBUG00000023728	rpusd1	98	58.065	ENSGGOG00000013997	RPUSD1	98	58.387	Gorilla_gorilla
ENSHBUG00000023728	rpusd1	98	56.678	ENSHGLG00000002595	RPUSD1	83	64.427	Heterocephalus_glaber_female
ENSHBUG00000023728	rpusd1	98	56.678	ENSHGLG00100014303	RPUSD1	83	64.427	Heterocephalus_glaber_male
ENSHBUG00000023728	rpusd1	99	76.623	ENSHCOG00000002390	rpusd1	99	76.623	Hippocampus_comes
ENSHBUG00000023728	rpusd1	98	67.869	ENSIPUG00000001570	rpusd1	99	68.627	Ictalurus_punctatus
ENSHBUG00000023728	rpusd1	98	57.980	ENSSTOG00000004276	RPUSD1	98	56.369	Ictidomys_tridecemlineatus
ENSHBUG00000023728	rpusd1	98	58.632	ENSJJAG00000015696	Rpusd1	98	57.980	Jaculus_jaculus
ENSHBUG00000023728	rpusd1	100	78.526	ENSKMAG00000017287	rpusd1	100	78.526	Kryptolebias_marmoratus
ENSHBUG00000023728	rpusd1	100	78.135	ENSLBEG00000022502	rpusd1	99	80.386	Labrus_bergylta
ENSHBUG00000023728	rpusd1	100	78.135	ENSLBEG00000013354	RPUSD1	99	80.386	Labrus_bergylta
ENSHBUG00000023728	rpusd1	98	62.092	ENSLACG00000008869	RPUSD1	99	59.365	Latimeria_chalumnae
ENSHBUG00000023728	rpusd1	69	80.093	ENSLOCG00000005682	rpusd1	99	80.093	Lepisosteus_oculatus
ENSHBUG00000023728	rpusd1	98	56.352	ENSLAFG00000002115	RPUSD1	84	63.636	Loxodonta_africana
ENSHBUG00000023728	rpusd1	98	57.929	ENSMFAG00000003961	RPUSD1	98	58.252	Macaca_fascicularis
ENSHBUG00000023728	rpusd1	98	57.929	ENSMMUG00000000842	RPUSD1	98	58.252	Macaca_mulatta
ENSHBUG00000023728	rpusd1	98	57.929	ENSMNEG00000042712	RPUSD1	98	58.252	Macaca_nemestrina
ENSHBUG00000023728	rpusd1	98	57.929	ENSMLEG00000030591	RPUSD1	98	58.252	Mandrillus_leucophaeus
ENSHBUG00000023728	rpusd1	100	84.566	ENSMAMG00000004735	rpusd1	99	84.887	Mastacembelus_armatus
ENSHBUG00000023728	rpusd1	100	99.678	ENSMZEG00005003214	rpusd1	100	99.678	Maylandia_zebra
ENSHBUG00000023728	rpusd1	97	62.706	ENSMGAG00000005447	RPUSD1	99	62.706	Meleagris_gallopavo
ENSHBUG00000023728	rpusd1	81	56.522	ENSMAUG00000019998	Rpusd1	96	56.522	Mesocricetus_auratus
ENSHBUG00000023728	rpusd1	98	57.329	ENSMICG00000017561	RPUSD1	78	74.510	Microcebus_murinus
ENSHBUG00000023728	rpusd1	98	57.655	ENSMOCG00000014082	Rpusd1	98	58.306	Microtus_ochrogaster
ENSHBUG00000023728	rpusd1	99	77.922	ENSMMOG00000012569	rpusd1	99	78.247	Mola_mola
ENSHBUG00000023728	rpusd1	99	60.841	ENSMODG00000016882	RPUSD1	99	58.307	Monodelphis_domestica
ENSHBUG00000023728	rpusd1	100	82.958	ENSMALG00000017818	rpusd1	99	84.566	Monopterus_albus
ENSHBUG00000023728	rpusd1	98	57.329	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.306	Mus_caroli
ENSHBUG00000023728	rpusd1	98	57.329	ENSMUSG00000041199	Rpusd1	98	58.306	Mus_musculus
ENSHBUG00000023728	rpusd1	98	56.678	MGP_PahariEiJ_G0023562	Rpusd1	98	55.172	Mus_pahari
ENSHBUG00000023728	rpusd1	98	57.329	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.306	Mus_spretus
ENSHBUG00000023728	rpusd1	96	57.947	ENSMPUG00000015897	RPUSD1	96	57.049	Mustela_putorius_furo
ENSHBUG00000023728	rpusd1	98	58.632	ENSMLUG00000001089	RPUSD1	84	64.122	Myotis_lucifugus
ENSHBUG00000023728	rpusd1	98	57.655	ENSNGAG00000003595	Rpusd1	83	64.822	Nannospalax_galili
ENSHBUG00000023728	rpusd1	100	95.498	ENSNBRG00000006457	rpusd1	100	95.498	Neolamprologus_brichardi
ENSHBUG00000023728	rpusd1	54	49.708	ENSNLEG00000008424	-	97	50.289	Nomascus_leucogenys
ENSHBUG00000023728	rpusd1	98	61.765	ENSMEUG00000016049	RPUSD1	98	60.383	Notamacropus_eugenii
ENSHBUG00000023728	rpusd1	98	51.792	ENSOPRG00000008340	RPUSD1	98	50.489	Ochotona_princeps
ENSHBUG00000023728	rpusd1	98	57.655	ENSODEG00000016945	RPUSD1	83	65.217	Octodon_degus
ENSHBUG00000023728	rpusd1	99	98.052	ENSONIG00000015672	rpusd1	100	98.052	Oreochromis_niloticus
ENSHBUG00000023728	rpusd1	100	78.457	ENSORLG00000013009	rpusd1	99	77.492	Oryzias_latipes
ENSHBUG00000023728	rpusd1	100	77.492	ENSORLG00020010382	rpusd1	99	77.492	Oryzias_latipes_hni
ENSHBUG00000023728	rpusd1	100	77.492	ENSORLG00015021354	rpusd1	99	76.527	Oryzias_latipes_hsok
ENSHBUG00000023728	rpusd1	100	76.206	ENSOMEG00000021426	rpusd1	99	76.206	Oryzias_melastigma
ENSHBUG00000023728	rpusd1	98	57.329	ENSOGAG00000003795	RPUSD1	98	57.329	Otolemur_garnettii
ENSHBUG00000023728	rpusd1	98	60.261	ENSOARG00000014254	RPUSD1	98	57.911	Ovis_aries
ENSHBUG00000023728	rpusd1	98	57.605	ENSPPAG00000034797	RPUSD1	98	57.929	Pan_paniscus
ENSHBUG00000023728	rpusd1	98	58.632	ENSPPRG00000012389	RPUSD1	98	57.980	Panthera_pardus
ENSHBUG00000023728	rpusd1	99	58.576	ENSPTIG00000008545	RPUSD1	77	74.257	Panthera_tigris_altaica
ENSHBUG00000023728	rpusd1	98	57.605	ENSPTRG00000007565	RPUSD1	98	57.929	Pan_troglodytes
ENSHBUG00000023728	rpusd1	98	57.929	ENSPANG00000024401	RPUSD1	98	58.252	Papio_anubis
ENSHBUG00000023728	rpusd1	100	68.167	ENSPKIG00000018890	rpusd1	91	66.250	Paramormyrops_kingsleyae
ENSHBUG00000023728	rpusd1	98	62.745	ENSPSIG00000013945	RPUSD1	99	62.745	Pelodiscus_sinensis
ENSHBUG00000023728	rpusd1	100	71.061	ENSPMGG00000014950	rpusd1	99	70.418	Periophthalmus_magnuspinnatus
ENSHBUG00000023728	rpusd1	98	57.329	ENSPEMG00000000497	Rpusd1	98	57.980	Peromyscus_maniculatus_bairdii
ENSHBUG00000023728	rpusd1	99	53.722	ENSPMAG00000001563	rpusd1	99	54.045	Petromyzon_marinus
ENSHBUG00000023728	rpusd1	99	62.662	ENSPCIG00000021216	-	93	60.635	Phascolarctos_cinereus
ENSHBUG00000023728	rpusd1	100	79.421	ENSPFOG00000007946	rpusd1	100	79.421	Poecilia_formosa
ENSHBUG00000023728	rpusd1	100	79.743	ENSPLAG00000011925	rpusd1	100	79.421	Poecilia_latipinna
ENSHBUG00000023728	rpusd1	100	79.421	ENSPMEG00000002910	rpusd1	100	79.421	Poecilia_mexicana
ENSHBUG00000023728	rpusd1	100	81.029	ENSPREG00000019851	rpusd1	100	81.029	Poecilia_reticulata
ENSHBUG00000023728	rpusd1	98	45.603	ENSPCAG00000002258	RPUSD1	84	49.802	Procavia_capensis
ENSHBUG00000023728	rpusd1	98	57.003	ENSPCOG00000022582	RPUSD1	98	57.003	Propithecus_coquereli
ENSHBUG00000023728	rpusd1	98	53.746	ENSPVAG00000013104	RPUSD1	98	53.746	Pteropus_vampyrus
ENSHBUG00000023728	rpusd1	100	100.000	ENSPNYG00000024076	rpusd1	100	100.000	Pundamilia_nyererei
ENSHBUG00000023728	rpusd1	99	65.909	ENSPNAG00000013806	rpusd1	99	64.839	Pygocentrus_nattereri
ENSHBUG00000023728	rpusd1	98	57.468	ENSRNOG00000023639	Rpusd1	98	58.306	Rattus_norvegicus
ENSHBUG00000023728	rpusd1	98	58.252	ENSRBIG00000030238	RPUSD1	98	58.576	Rhinopithecus_bieti
ENSHBUG00000023728	rpusd1	98	58.252	ENSRROG00000036663	RPUSD1	98	58.576	Rhinopithecus_roxellana
ENSHBUG00000023728	rpusd1	98	58.306	ENSSBOG00000033063	RPUSD1	98	57.419	Saimiri_boliviensis_boliviensis
ENSHBUG00000023728	rpusd1	98	60.841	ENSSHAG00000013500	RPUSD1	98	59.236	Sarcophilus_harrisii
ENSHBUG00000023728	rpusd1	98	71.242	ENSSFOG00015014394	rpusd1	99	68.269	Scleropages_formosus
ENSHBUG00000023728	rpusd1	100	84.566	ENSSMAG00000008045	rpusd1	93	84.566	Scophthalmus_maximus
ENSHBUG00000023728	rpusd1	100	82.958	ENSSDUG00000001829	rpusd1	97	87.781	Seriola_dumerili
ENSHBUG00000023728	rpusd1	100	82.958	ENSSLDG00000020853	rpusd1	97	87.781	Seriola_lalandi_dorsalis
ENSHBUG00000023728	rpusd1	53	72.455	ENSSARG00000011187	-	100	72.455	Sorex_araneus
ENSHBUG00000023728	rpusd1	63	56.410	ENSSPUG00000005119	-	98	54.872	Sphenodon_punctatus
ENSHBUG00000023728	rpusd1	100	87.460	ENSSPAG00000012708	rpusd1	99	87.460	Stegastes_partitus
ENSHBUG00000023728	rpusd1	98	59.283	ENSSSCG00000008000	RPUSD1	98	66.929	Sus_scrofa
ENSHBUG00000023728	rpusd1	81	69.323	ENSTGUG00000015375	RPUSD1	99	69.323	Taeniopygia_guttata
ENSHBUG00000023728	rpusd1	100	80.386	ENSTRUG00000003041	rpusd1	99	80.386	Takifugu_rubripes
ENSHBUG00000023728	rpusd1	99	71.753	ENSTNIG00000002660	rpusd1	99	71.104	Tetraodon_nigroviridis
ENSHBUG00000023728	rpusd1	98	58.958	ENSTTRG00000010167	RPUSD1	81	67.194	Tursiops_truncatus
ENSHBUG00000023728	rpusd1	98	57.980	ENSUAMG00000012736	RPUSD1	98	56.774	Ursus_americanus
ENSHBUG00000023728	rpusd1	98	57.980	ENSUMAG00000021174	RPUSD1	91	64.822	Ursus_maritimus
ENSHBUG00000023728	rpusd1	98	57.980	ENSVVUG00000012357	RPUSD1	98	57.097	Vulpes_vulpes
ENSHBUG00000023728	rpusd1	98	63.072	ENSXETG00000007184	rpusd1	98	61.093	Xenopus_tropicalis
ENSHBUG00000023728	rpusd1	100	78.457	ENSXCOG00000017930	rpusd1	100	78.457	Xiphophorus_couchianus
ENSHBUG00000023728	rpusd1	100	79.100	ENSXMAG00000024084	rpusd1	100	79.100	Xiphophorus_maculatus