EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000023819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 7514 bases
Position: chrJH425725.1:417554-425067
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000021429	S10_plectin	PF03501.15	4.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000036411	-	501	-	ENSHBUP00000021429	166 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000023819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000023819	-	81	58.394	ENSHBUG00000018067	-	76	58.394
ENSHBUG00000023819	-	86	53.425	ENSHBUG00000011566	rps10	80	53.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023819	-	72	89.916	ENSAPOG00000014059	-	82	89.916	Acanthochromis_polyacanthus
ENSHBUG00000023819	-	63	63.810	ENSAPOG00000016494	-	54	63.810	Acanthochromis_polyacanthus
ENSHBUG00000023819	-	72	63.333	ENSACIG00000019704	-	58	63.333	Amphilophus_citrinellus
ENSHBUG00000023819	-	87	88.194	ENSACIG00000013806	-	78	88.194	Amphilophus_citrinellus
ENSHBUG00000023819	-	67	65.766	ENSAOCG00000007730	-	65	65.766	Amphiprion_ocellaris
ENSHBUG00000023819	-	79	87.786	ENSAOCG00000011000	-	76	87.786	Amphiprion_ocellaris
ENSHBUG00000023819	-	65	88.889	ENSAPEG00000019531	-	61	88.889	Amphiprion_percula
ENSHBUG00000023819	-	53	60.227	ENSAPEG00000017745	-	56	60.227	Amphiprion_percula
ENSHBUG00000023819	-	61	71.569	ENSATEG00000004340	-	72	71.569	Anabas_testudineus
ENSHBUG00000023819	-	81	58.394	ENSACLG00000001013	-	76	58.394	Astatotilapia_calliptera
ENSHBUG00000023819	-	75	82.400	ENSAMXG00000037914	-	75	82.400	Astyanax_mexicanus
ENSHBUG00000023819	-	57	56.383	WBGene00004479	rps-10	62	56.383	Caenorhabditis_elegans
ENSHBUG00000023819	-	61	60.194	ENSCING00000006180	-	64	60.194	Ciona_intestinalis
ENSHBUG00000023819	-	79	85.496	ENSCSEG00000009179	-	77	85.496	Cynoglossus_semilaevis
ENSHBUG00000023819	-	61	58.416	FBgn0027494	RpS10a	61	58.416	Drosophila_melanogaster
ENSHBUG00000023819	-	89	50.000	FBgn0285947	RpS10b	85	50.000	Drosophila_melanogaster
ENSHBUG00000023819	-	61	57.143	ENSEBUG00000015221	-	73	57.143	Eptatretus_burgeri
ENSHBUG00000023819	-	76	63.492	ENSEASG00005009727	-	53	63.492	Equus_asinus_asinus
ENSHBUG00000023819	-	80	58.519	ENSECAG00000039725	-	58	58.519	Equus_caballus
ENSHBUG00000023819	-	85	82.979	ENSFHEG00000008769	-	88	82.979	Fundulus_heteroclitus
ENSHBUG00000023819	-	76	88.095	ENSGAFG00000001335	-	65	88.095	Gambusia_affinis
ENSHBUG00000023819	-	79	68.421	ENSLBEG00000020432	-	82	68.939	Labrus_bergylta
ENSHBUG00000023819	-	75	65.600	ENSLACG00000010998	-	72	65.600	Latimeria_chalumnae
ENSHBUG00000023819	-	100	98.193	ENSMZEG00005007838	-	100	98.193	Maylandia_zebra
ENSHBUG00000023819	-	81	58.394	ENSMZEG00005026198	-	76	58.394	Maylandia_zebra
ENSHBUG00000023819	-	68	76.230	ENSMMOG00000003228	-	69	76.230	Mola_mola
ENSHBUG00000023819	-	76	65.079	ENSMMOG00000014380	-	62	65.079	Mola_mola
ENSHBUG00000023819	-	73	63.115	ENSMALG00000015614	-	76	63.115	Monopterus_albus
ENSHBUG00000023819	-	73	62.295	ENSNBRG00000016554	-	75	56.618	Neolamprologus_brichardi
ENSHBUG00000023819	-	84	91.608	ENSNBRG00000008848	-	99	91.608	Neolamprologus_brichardi
ENSHBUG00000023819	-	80	71.324	ENSPKIG00000013061	-	70	74.016	Paramormyrops_kingsleyae
ENSHBUG00000023819	-	79	84.733	ENSPMGG00000017071	-	70	84.733	Periophthalmus_magnuspinnatus
ENSHBUG00000023819	-	62	62.136	ENSPMAG00000003064	-	64	62.136	Petromyzon_marinus
ENSHBUG00000023819	-	60	72.727	ENSPMAG00000010266	-	53	72.727	Petromyzon_marinus
ENSHBUG00000023819	-	66	85.455	ENSPLAG00000012690	-	65	85.455	Poecilia_latipinna
ENSHBUG00000023819	-	81	57.664	ENSPNYG00000006286	-	76	57.664	Pundamilia_nyererei
ENSHBUG00000023819	-	100	99.398	ENSPNYG00000012665	-	100	99.398	Pundamilia_nyererei
ENSHBUG00000023819	-	79	62.406	ENSPNAG00000021290	-	71	62.406	Pygocentrus_nattereri
ENSHBUG00000023819	-	60	50.000	YOR293W	RPS10A	93	50.000	Saccharomyces_cerevisiae
ENSHBUG00000023819	-	60	49.000	YMR230W	RPS10B	93	49.000	Saccharomyces_cerevisiae
ENSHBUG00000023819	-	75	72.581	ENSSFOG00015009603	-	62	72.581	Scleropages_formosus
ENSHBUG00000023819	-	60	78.218	ENSSFOG00015012004	-	57	78.218	Scleropages_formosus
ENSHBUG00000023819	-	83	89.781	ENSSDUG00000010997	-	82	89.781	Seriola_dumerili
ENSHBUG00000023819	-	84	61.538	ENSSDUG00000011052	-	87	61.538	Seriola_dumerili
ENSHBUG00000023819	-	80	64.394	ENSSLDG00000016257	-	68	65.600	Seriola_lalandi_dorsalis
ENSHBUG00000023819	-	79	91.603	ENSSLDG00000012473	-	84	91.603	Seriola_lalandi_dorsalis
ENSHBUG00000023819	-	69	81.034	ENSSPAG00000015615	-	91	81.034	Stegastes_partitus
ENSHBUG00000023819	-	84	53.191	ENSSPAG00000012512	-	67	52.143	Stegastes_partitus
ENSHBUG00000023819	-	60	74.747	ENSSSCG00000033521	-	61	74.747	Sus_scrofa
ENSHBUG00000023819	-	89	57.047	ENSXETG00000032983	-	77	59.060	Xenopus_tropicalis
ENSHBUG00000023819	-	79	87.786	ENSXCOG00000016917	-	81	87.786	Xiphophorus_couchianus
ENSHBUG00000023819	-	66	71.667	ENSXMAG00000029046	-	70	71.074	Xiphophorus_maculatus