EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000023860 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 1347 bases
Position: chrJH425351.1:1744340-1745686
Accession: 102300565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000030	Gar1	PF04410.14	2.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000016201	-	588	XM_014332753	ENSHBUP00000000030	195 (aa)	XP_014188239	-

Gene Model

Click here to download ENSHBUG00000023860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000023860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000023860	gar1	79	94.156	ENSATEG00000003733	gar1	71	94.156	Anabas_testudineus
ENSHBUG00000023860	gar1	86	88.235	ENSACLG00000010029	gar1	71	94.643	Astatotilapia_calliptera
ENSHBUG00000023860	gar1	51	93.000	ENSCLAG00000005335	GAR1	69	96.364	Chinchilla_lanigera
ENSHBUG00000023860	gar1	63	93.496	ENSCGRG00000010165	-	92	93.496	Cricetulus_griseus_crigri
ENSHBUG00000023860	gar1	50	94.898	ENSHCOG00000008656	gar1	58	89.844	Hippocampus_comes
ENSHBUG00000023860	gar1	82	91.358	ENSKMAG00000010402	gar1	77	91.358	Kryptolebias_marmoratus
ENSHBUG00000023860	gar1	58	84.956	ENSLACG00000003306	GAR1	58	90.625	Latimeria_chalumnae
ENSHBUG00000023860	gar1	79	93.631	ENSMAMG00000017583	gar1	70	93.631	Mastacembelus_armatus
ENSHBUG00000023860	gar1	59	97.391	ENSMAUG00000016788	Gar1	96	94.805	Mesocricetus_auratus
ENSHBUG00000023860	gar1	59	96.522	ENSMUSG00000028010	Gar1	96	94.805	Mus_musculus
ENSHBUG00000023860	gar1	59	96.522	MGP_PahariEiJ_G0027076	Gar1	96	94.805	Mus_pahari
ENSHBUG00000023860	gar1	59	96.522	MGP_SPRETEiJ_G0026580	Gar1	96	94.805	Mus_spretus
ENSHBUG00000023860	gar1	86	97.619	ENSNBRG00000014828	gar1	74	97.619	Neolamprologus_brichardi
ENSHBUG00000023860	gar1	58	79.825	ENSNLEG00000034282	-	58	79.825	Nomascus_leucogenys
ENSHBUG00000023860	gar1	79	96.774	ENSONIG00000001085	gar1	70	96.774	Oreochromis_niloticus
ENSHBUG00000023860	gar1	72	92.414	ENSOCUG00000003901	GAR1	67	92.414	Oryctolagus_cuniculus
ENSHBUG00000023860	gar1	83	89.349	ENSPMGG00000022004	gar1	74	89.349	Periophthalmus_magnuspinnatus
ENSHBUG00000023860	gar1	79	93.038	ENSPFOG00000024155	gar1	75	93.038	Poecilia_formosa
ENSHBUG00000023860	gar1	79	93.038	ENSPLAG00000015056	gar1	75	93.038	Poecilia_latipinna
ENSHBUG00000023860	gar1	79	93.631	ENSPMEG00000009320	gar1	75	93.631	Poecilia_mexicana
ENSHBUG00000023860	gar1	86	86.127	ENSPREG00000010377	gar1	72	86.127	Poecilia_reticulata
ENSHBUG00000023860	gar1	86	98.214	ENSPNYG00000020926	gar1	70	98.214	Pundamilia_nyererei
ENSHBUG00000023860	gar1	50	98.969	ENSRNOG00000061146	Gar1	57	98.969	Rattus_norvegicus
ENSHBUG00000023860	gar1	79	93.590	ENSSLDG00000023264	gar1	73	93.590	Seriola_lalandi_dorsalis
ENSHBUG00000023860	gar1	68	84.211	ENSSPUG00000008707	GAR1	54	96.875	Sphenodon_punctatus
ENSHBUG00000023860	gar1	70	84.672	ENSSSCG00000009137	GAR1	62	89.683	Sus_scrofa
ENSHBUG00000023860	gar1	57	97.321	ENSTNIG00000013023	gar1	64	97.321	Tetraodon_nigroviridis