EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000087 (Gene tree)
Gene ID: 109529131
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5335 bases
Position: chrKV880349.1:268602-273936
Accession: 109529131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018442	CBFNT	PF08143.11	3.2e-06	1	1
ENSHCOP00000001951	CBFNT	PF08143.11	3.9e-06	1	1
ENSHCOP00000018442	RRM_1	PF00076.22	5.3e-32	1	2
ENSHCOP00000018442	RRM_1	PF00076.22	5.3e-32	2	2
ENSHCOP00000001951	RRM_1	PF00076.22	1e-31	1	2
ENSHCOP00000001951	RRM_1	PF00076.22	1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011235	-	981	XM_019892327	ENSHCOP00000001951	326 (aa)	XP_019747886	-
ENSHCOT00000011254	-	804	-	ENSHCOP00000018442	267 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000000087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000087	hnrnpd	80	61.111	ENSHCOG00000009363	-	99	54.348
ENSHCOG00000000087	hnrnpd	62	36.257	ENSHCOG00000007180	-	87	36.364
ENSHCOG00000000087	hnrnpd	67	37.195	ENSHCOG00000015858	tardbpl	58	37.195
ENSHCOG00000000087	hnrnpd	68	46.809	ENSHCOG00000000266	msi2a	57	44.019
ENSHCOG00000000087	hnrnpd	51	40.506	ENSHCOG00000001170	cirbpa	97	40.506
ENSHCOG00000000087	hnrnpd	57	32.877	ENSHCOG00000006795	slirp	83	32.000
ENSHCOG00000000087	hnrnpd	64	35.260	ENSHCOG00000002224	tardbp	52	39.583
ENSHCOG00000000087	hnrnpd	68	42.424	ENSHCOG00000008541	dazap1	54	42.424
ENSHCOG00000000087	hnrnpd	62	34.503	ENSHCOG00000007174	HNRNPA0	91	34.706
ENSHCOG00000000087	hnrnpd	88	61.538	ENSHCOG00000015341	hnrnpaba	86	63.248
ENSHCOG00000000087	hnrnpd	73	35.242	ENSHCOG00000019526	hnrnpa1b	80	34.468
ENSHCOG00000000087	hnrnpd	67	41.081	ENSHCOG00000000313	HNRNPA3	64	39.906
ENSHCOG00000000087	hnrnpd	83	39.669	ENSHCOG00000012067	-	75	54.762
ENSHCOG00000000087	hnrnpd	74	45.783	ENSHCOG00000012019	MSI1	60	45.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000087	hnrnpd	84	83.254	ENSG00000138668	HNRNPD	100	88.288	Homo_sapiens
ENSHCOG00000000087	hnrnpd	100	86.142	ENSAPOG00000006184	hnrnpd	100	86.142	Acanthochromis_polyacanthus
ENSHCOG00000000087	hnrnpd	88	74.593	ENSAMEG00000005158	HNRNPD	96	75.000	Ailuropoda_melanoleuca
ENSHCOG00000000087	hnrnpd	92	87.755	ENSACIG00000008353	hnrnpd	84	87.023	Amphilophus_citrinellus
ENSHCOG00000000087	hnrnpd	100	86.142	ENSAOCG00000014191	hnrnpd	100	86.142	Amphiprion_ocellaris
ENSHCOG00000000087	hnrnpd	97	82.759	ENSAPEG00000005603	hnrnpd	100	81.875	Amphiprion_percula
ENSHCOG00000000087	hnrnpd	97	81.505	ENSATEG00000007097	hnrnpd	100	80.625	Anabas_testudineus
ENSHCOG00000000087	hnrnpd	83	79.457	ENSACAG00000010342	HNRNPD	100	79.457	Anolis_carolinensis
ENSHCOG00000000087	hnrnpd	84	80.797	ENSANAG00000035221	HNRNPD	85	79.931	Aotus_nancymaae
ENSHCOG00000000087	hnrnpd	96	86.486	ENSACLG00000026497	hnrnpd	100	84.556	Astatotilapia_calliptera
ENSHCOG00000000087	hnrnpd	97	83.648	ENSACLG00000025213	hnrnpd	100	83.648	Astatotilapia_calliptera
ENSHCOG00000000087	hnrnpd	84	82.374	ENSAMXG00000001477	hnrnpd	96	76.721	Astyanax_mexicanus
ENSHCOG00000000087	hnrnpd	86	75.806	ENSBTAG00000013952	HNRNPD	95	69.912	Bos_taurus
ENSHCOG00000000087	hnrnpd	84	80.797	ENSCJAG00000015165	HNRNPD	85	79.585	Callithrix_jacchus
ENSHCOG00000000087	hnrnpd	84	75.593	ENSCAFG00000025045	HNRNPD	86	75.000	Canis_familiaris
ENSHCOG00000000087	hnrnpd	84	75.593	ENSCAFG00020010713	HNRNPD	86	75.000	Canis_lupus_dingo
ENSHCOG00000000087	hnrnpd	85	80.216	ENSCHIG00000022317	HNRNPD	95	74.062	Capra_hircus
ENSHCOG00000000087	hnrnpd	83	75.743	ENSTSYG00000010395	HNRNPD	100	79.310	Carlito_syrichta
ENSHCOG00000000087	hnrnpd	83	73.745	ENSCPOG00000040484	HNRNPD	77	74.231	Cavia_porcellus
ENSHCOG00000000087	hnrnpd	60	56.281	ENSCCAG00000021563	-	73	61.111	Cebus_capucinus
ENSHCOG00000000087	hnrnpd	84	80.797	ENSCCAG00000024528	HNRNPD	95	74.062	Cebus_capucinus
ENSHCOG00000000087	hnrnpd	84	80.797	ENSCATG00000039829	HNRNPD	85	79.585	Cercocebus_atys
ENSHCOG00000000087	hnrnpd	84	81.091	ENSCLAG00000006540	HNRNPD	92	81.522	Chinchilla_lanigera
ENSHCOG00000000087	hnrnpd	84	75.593	ENSCSAG00000004463	HNRNPD	86	74.675	Chlorocebus_sabaeus
ENSHCOG00000000087	hnrnpd	83	78.358	ENSCHOG00000000045	HNRNPD	98	78.810	Choloepus_hoffmanni
ENSHCOG00000000087	hnrnpd	83	80.741	ENSCPBG00000008025	HNRNPD	83	80.797	Chrysemys_picta_bellii
ENSHCOG00000000087	hnrnpd	84	80.435	ENSCANG00000018501	HNRNPD	85	79.239	Colobus_angolensis_palliatus
ENSHCOG00000000087	hnrnpd	84	81.159	ENSCGRG00001014634	Hnrnpd	86	79.585	Cricetulus_griseus_chok1gshd
ENSHCOG00000000087	hnrnpd	90	72.542	ENSCGRG00000007563	Hnrnpd	96	78.598	Cricetulus_griseus_crigri
ENSHCOG00000000087	hnrnpd	98	73.476	ENSCSEG00000010909	hnrnpd	100	74.845	Cynoglossus_semilaevis
ENSHCOG00000000087	hnrnpd	97	78.438	ENSCVAG00000019790	hnrnpd	100	81.562	Cyprinodon_variegatus
ENSHCOG00000000087	hnrnpd	97	76.562	ENSDARG00000059246	hnrnpd	100	75.312	Danio_rerio
ENSHCOG00000000087	hnrnpd	66	71.023	ENSDNOG00000041055	-	69	71.023	Dasypus_novemcinctus
ENSHCOG00000000087	hnrnpd	85	68.421	ENSDNOG00000045079	-	76	68.421	Dasypus_novemcinctus
ENSHCOG00000000087	hnrnpd	83	78.731	ENSDNOG00000013830	-	76	79.182	Dasypus_novemcinctus
ENSHCOG00000000087	hnrnpd	84	81.091	ENSDORG00000012507	Hnrnpd	99	78.694	Dipodomys_ordii
ENSHCOG00000000087	hnrnpd	83	76.471	ENSETEG00000016709	HNRNPD	86	75.325	Echinops_telfairi
ENSHCOG00000000087	hnrnpd	84	80.797	ENSEASG00005016278	HNRNPD	85	79.931	Equus_asinus_asinus
ENSHCOG00000000087	hnrnpd	84	75.593	ENSECAG00000009344	HNRNPD	86	75.000	Equus_caballus
ENSHCOG00000000087	hnrnpd	85	65.993	ENSEEUG00000007552	HNRNPD	86	65.472	Erinaceus_europaeus
ENSHCOG00000000087	hnrnpd	86	75.214	ENSELUG00000003230	hnrnpd	84	77.689	Esox_lucius
ENSHCOG00000000087	hnrnpd	84	78.623	ENSFCAG00000027404	HNRNPD	86	75.000	Felis_catus
ENSHCOG00000000087	hnrnpd	84	81.091	ENSFALG00000005716	HNRNPD	83	81.522	Ficedula_albicollis
ENSHCOG00000000087	hnrnpd	83	79.104	ENSFDAG00000007958	HNRNPD	81	79.554	Fukomys_damarensis
ENSHCOG00000000087	hnrnpd	97	78.683	ENSFHEG00000006838	hnrnpd	100	79.688	Fundulus_heteroclitus
ENSHCOG00000000087	hnrnpd	86	82.609	ENSGMOG00000018481	hnrnpd	100	72.923	Gadus_morhua
ENSHCOG00000000087	hnrnpd	83	81.111	ENSGALG00000011184	HNRNPD	100	81.008	Gallus_gallus
ENSHCOG00000000087	hnrnpd	100	83.521	ENSGAFG00000003714	hnrnpd	100	83.521	Gambusia_affinis
ENSHCOG00000000087	hnrnpd	97	78.769	ENSGACG00000015669	hnrnpd	100	77.607	Gasterosteus_aculeatus
ENSHCOG00000000087	hnrnpd	83	75.433	ENSGAGG00000003656	HNRNPD	94	71.028	Gopherus_agassizii
ENSHCOG00000000087	hnrnpd	83	81.008	ENSGGOG00000026760	HNRNPD	94	81.467	Gorilla_gorilla
ENSHCOG00000000087	hnrnpd	97	83.333	ENSHBUG00000011794	hnrnpd	100	82.075	Haplochromis_burtoni
ENSHCOG00000000087	hnrnpd	84	81.455	ENSHGLG00000004214	HNRNPD	98	72.256	Heterocephalus_glaber_female
ENSHCOG00000000087	hnrnpd	84	83.732	ENSHGLG00100005996	HNRNPD	100	81.783	Heterocephalus_glaber_male
ENSHCOG00000000087	hnrnpd	95	73.397	ENSIPUG00000024954	hnrnpd	99	74.359	Ictalurus_punctatus
ENSHCOG00000000087	hnrnpd	84	80.435	ENSSTOG00000013970	HNRNPD	85	79.239	Ictidomys_tridecemlineatus
ENSHCOG00000000087	hnrnpd	84	80.797	ENSJJAG00000023387	Hnrnpd	97	79.239	Jaculus_jaculus
ENSHCOG00000000087	hnrnpd	97	77.429	ENSKMAG00000004310	hnrnpd	100	79.688	Kryptolebias_marmoratus
ENSHCOG00000000087	hnrnpd	97	82.390	ENSLBEG00000027508	hnrnpd	100	79.245	Labrus_bergylta
ENSHCOG00000000087	hnrnpd	93	76.898	ENSLACG00000005306	HNRNPD	96	77.228	Latimeria_chalumnae
ENSHCOG00000000087	hnrnpd	84	82.246	ENSLOCG00000010743	hnrnpd	100	74.448	Lepisosteus_oculatus
ENSHCOG00000000087	hnrnpd	83	78.731	ENSLAFG00000016483	HNRNPD	98	78.598	Loxodonta_africana
ENSHCOG00000000087	hnrnpd	84	80.797	ENSMFAG00000031674	HNRNPD	85	79.585	Macaca_fascicularis
ENSHCOG00000000087	hnrnpd	84	80.797	ENSMNEG00000028199	HNRNPD	85	79.585	Macaca_nemestrina
ENSHCOG00000000087	hnrnpd	84	80.797	ENSMLEG00000028370	HNRNPD	85	79.585	Mandrillus_leucophaeus
ENSHCOG00000000087	hnrnpd	97	82.704	ENSMAMG00000004971	hnrnpd	100	82.390	Mastacembelus_armatus
ENSHCOG00000000087	hnrnpd	97	83.648	ENSMZEG00005007558	hnrnpd	100	83.648	Maylandia_zebra
ENSHCOG00000000087	hnrnpd	83	80.620	ENSMGAG00000008051	HNRNPD	100	81.081	Meleagris_gallopavo
ENSHCOG00000000087	hnrnpd	84	81.159	ENSMAUG00000008830	Hnrnpd	95	74.684	Mesocricetus_auratus
ENSHCOG00000000087	hnrnpd	83	81.481	ENSMICG00000010984	HNRNPD	91	79.038	Microcebus_murinus
ENSHCOG00000000087	hnrnpd	85	80.576	ENSMOCG00000021398	Hnrnpd	95	74.214	Microtus_ochrogaster
ENSHCOG00000000087	hnrnpd	97	78.056	ENSMMOG00000008627	hnrnpd	100	76.176	Mola_mola
ENSHCOG00000000087	hnrnpd	84	75.338	ENSMODG00000011898	HNRNPD	82	73.955	Monodelphis_domestica
ENSHCOG00000000087	hnrnpd	97	79.624	ENSMALG00000016024	hnrnpd	100	83.438	Monopterus_albus
ENSHCOG00000000087	hnrnpd	85	83.628	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	92.000	Mus_caroli
ENSHCOG00000000087	hnrnpd	85	83.628	ENSMUSG00000000568	Hnrnpd	100	92.000	Mus_musculus
ENSHCOG00000000087	hnrnpd	85	83.628	MGP_PahariEiJ_G0017224	Hnrnpd	100	92.000	Mus_pahari
ENSHCOG00000000087	hnrnpd	85	83.628	MGP_SPRETEiJ_G0028443	Hnrnpd	100	92.000	Mus_spretus
ENSHCOG00000000087	hnrnpd	83	78.731	ENSMPUG00000014782	HNRNPD	98	79.182	Mustela_putorius_furo
ENSHCOG00000000087	hnrnpd	85	68.687	ENSMLUG00000010628	HNRNPD	95	64.201	Myotis_lucifugus
ENSHCOG00000000087	hnrnpd	84	81.159	ENSNGAG00000013451	Hnrnpd	86	79.585	Nannospalax_galili
ENSHCOG00000000087	hnrnpd	97	83.648	ENSNBRG00000019548	hnrnpd	100	82.390	Neolamprologus_brichardi
ENSHCOG00000000087	hnrnpd	83	81.618	ENSNLEG00000008600	HNRNPD	84	82.051	Nomascus_leucogenys
ENSHCOG00000000087	hnrnpd	65	75.926	ENSMEUG00000006804	-	58	76.687	Notamacropus_eugenii
ENSHCOG00000000087	hnrnpd	84	73.379	ENSOPRG00000009336	HNRNPD	95	66.766	Ochotona_princeps
ENSHCOG00000000087	hnrnpd	84	81.091	ENSODEG00000001897	HNRNPD	97	76.052	Octodon_degus
ENSHCOG00000000087	hnrnpd	97	83.648	ENSONIG00000015390	hnrnpd	100	83.648	Oreochromis_niloticus
ENSHCOG00000000087	hnrnpd	87	81.323	ENSOANG00000001932	HNRNPD	100	81.783	Ornithorhynchus_anatinus
ENSHCOG00000000087	hnrnpd	83	78.731	ENSOCUG00000001357	HNRNPD	98	78.598	Oryctolagus_cuniculus
ENSHCOG00000000087	hnrnpd	100	83.521	ENSORLG00000001833	hnrnpd	100	83.521	Oryzias_latipes
ENSHCOG00000000087	hnrnpd	88	78.049	ENSORLG00020014780	hnrnpd	83	81.597	Oryzias_latipes_hni
ENSHCOG00000000087	hnrnpd	100	83.521	ENSORLG00015002382	hnrnpd	100	83.521	Oryzias_latipes_hsok
ENSHCOG00000000087	hnrnpd	97	76.899	ENSOMEG00000018558	hnrnpd	100	74.763	Oryzias_melastigma
ENSHCOG00000000087	hnrnpd	84	75.593	ENSOGAG00000004075	HNRNPD	86	74.675	Otolemur_garnettii
ENSHCOG00000000087	hnrnpd	84	80.365	ENSOARG00000000579	HNRNPD	98	79.182	Ovis_aries
ENSHCOG00000000087	hnrnpd	94	75.649	ENSPPAG00000035750	HNRNPD	100	79.310	Pan_paniscus
ENSHCOG00000000087	hnrnpd	84	80.797	ENSPPRG00000012258	HNRNPD	85	79.931	Panthera_pardus
ENSHCOG00000000087	hnrnpd	88	79.514	ENSPTIG00000019434	HNRNPD	100	79.931	Panthera_tigris_altaica
ENSHCOG00000000087	hnrnpd	84	80.797	ENSPTRG00000016215	HNRNPD	95	73.750	Pan_troglodytes
ENSHCOG00000000087	hnrnpd	84	80.797	ENSPANG00000011785	HNRNPD	85	79.585	Papio_anubis
ENSHCOG00000000087	hnrnpd	100	78.277	ENSPKIG00000025512	hnrnpd	100	78.652	Paramormyrops_kingsleyae
ENSHCOG00000000087	hnrnpd	70	87.209	ENSPSIG00000017029	HNRNPD	81	84.390	Pelodiscus_sinensis
ENSHCOG00000000087	hnrnpd	86	79.565	ENSPMGG00000017169	hnrnpd	87	78.244	Periophthalmus_magnuspinnatus
ENSHCOG00000000087	hnrnpd	83	78.731	ENSPEMG00000014804	Hnrnpd	100	78.598	Peromyscus_maniculatus_bairdii
ENSHCOG00000000087	hnrnpd	84	80.435	ENSPCIG00000003112	HNRNPD	77	81.159	Phascolarctos_cinereus
ENSHCOG00000000087	hnrnpd	97	76.875	ENSPFOG00000002596	hnrnpd	100	81.875	Poecilia_formosa
ENSHCOG00000000087	hnrnpd	97	81.191	ENSPLAG00000004297	hnrnpd	100	81.562	Poecilia_latipinna
ENSHCOG00000000087	hnrnpd	97	76.875	ENSPMEG00000000152	hnrnpd	100	81.875	Poecilia_mexicana
ENSHCOG00000000087	hnrnpd	96	80.153	ENSPREG00000018081	hnrnpd	95	83.969	Poecilia_reticulata
ENSHCOG00000000087	hnrnpd	84	75.593	ENSPPYG00000014885	HNRNPD	86	74.675	Pongo_abelii
ENSHCOG00000000087	hnrnpd	84	65.385	ENSPPYG00000020411	-	99	65.385	Pongo_abelii
ENSHCOG00000000087	hnrnpd	84	74.324	ENSPCAG00000002182	HNRNPD	86	73.463	Procavia_capensis
ENSHCOG00000000087	hnrnpd	84	80.797	ENSPCOG00000021331	HNRNPD	85	79.931	Propithecus_coquereli
ENSHCOG00000000087	hnrnpd	84	73.898	ENSPVAG00000000003	HNRNPD	86	73.701	Pteropus_vampyrus
ENSHCOG00000000087	hnrnpd	97	83.333	ENSPNYG00000004884	hnrnpd	100	82.075	Pundamilia_nyererei
ENSHCOG00000000087	hnrnpd	97	70.476	ENSPNAG00000016368	hnrnpd	100	71.429	Pygocentrus_nattereri
ENSHCOG00000000087	hnrnpd	84	80.364	ENSRNOG00000002292	Hnrnpd	95	73.899	Rattus_norvegicus
ENSHCOG00000000087	hnrnpd	84	80.797	ENSRBIG00000035345	HNRNPD	85	79.585	Rhinopithecus_bieti
ENSHCOG00000000087	hnrnpd	84	80.797	ENSRROG00000011888	HNRNPD	85	79.585	Rhinopithecus_roxellana
ENSHCOG00000000087	hnrnpd	84	80.797	ENSSBOG00000032881	HNRNPD	85	79.585	Saimiri_boliviensis_boliviensis
ENSHCOG00000000087	hnrnpd	83	78.731	ENSSHAG00000013312	HNRNPD	98	79.182	Sarcophilus_harrisii
ENSHCOG00000000087	hnrnpd	97	78.302	ENSSFOG00015005913	hnrnpd	100	76.415	Scleropages_formosus
ENSHCOG00000000087	hnrnpd	97	78.438	ENSSMAG00000009686	hnrnpd	100	79.439	Scophthalmus_maximus
ENSHCOG00000000087	hnrnpd	97	82.188	ENSSDUG00000010792	hnrnpd	100	80.938	Seriola_dumerili
ENSHCOG00000000087	hnrnpd	97	75.157	ENSSLDG00000015962	hnrnpd	100	77.044	Seriola_lalandi_dorsalis
ENSHCOG00000000087	hnrnpd	83	73.408	ENSSARG00000006883	HNRNPD	98	77.695	Sorex_araneus
ENSHCOG00000000087	hnrnpd	84	78.210	ENSSPUG00000013677	HNRNPD	100	78.210	Sphenodon_punctatus
ENSHCOG00000000087	hnrnpd	100	86.142	ENSSPAG00000021014	hnrnpd	100	86.142	Stegastes_partitus
ENSHCOG00000000087	hnrnpd	84	80.435	ENSSSCG00000009249	HNRNPD	85	79.931	Sus_scrofa
ENSHCOG00000000087	hnrnpd	83	75.779	ENSTGUG00000002858	HNRNPD	95	72.903	Taeniopygia_guttata
ENSHCOG00000000087	hnrnpd	97	74.051	ENSTRUG00000018450	hnrnpd	100	75.633	Takifugu_rubripes
ENSHCOG00000000087	hnrnpd	89	79.167	ENSTNIG00000013499	hnrnpd	99	79.167	Tetraodon_nigroviridis
ENSHCOG00000000087	hnrnpd	83	74.627	ENSTBEG00000002327	HNRNPD	98	74.539	Tupaia_belangeri
ENSHCOG00000000087	hnrnpd	84	75.593	ENSTTRG00000007592	HNRNPD	86	75.000	Tursiops_truncatus
ENSHCOG00000000087	hnrnpd	84	80.365	ENSUAMG00000011374	HNRNPD	74	79.182	Ursus_americanus
ENSHCOG00000000087	hnrnpd	84	80.365	ENSUMAG00000008685	HNRNPD	83	79.182	Ursus_maritimus
ENSHCOG00000000087	hnrnpd	84	81.008	ENSVPAG00000004374	HNRNPD	100	81.467	Vicugna_pacos
ENSHCOG00000000087	hnrnpd	84	75.593	ENSVVUG00000024658	HNRNPD	86	75.000	Vulpes_vulpes
ENSHCOG00000000087	hnrnpd	89	71.233	ENSXETG00000012569	hnrnpd	99	70.890	Xenopus_tropicalis
ENSHCOG00000000087	hnrnpd	85	89.535	ENSXCOG00000017639	hnrnpd	100	81.992	Xiphophorus_couchianus
ENSHCOG00000000087	hnrnpd	97	76.324	ENSXMAG00000019151	hnrnpd	100	81.308	Xiphophorus_maculatus