EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000129 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6492 bases
Position: chrKV880395.1:583493-589984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000019548	RVT_1	PF00078.27	2.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008461	-	615	-	ENSHCOP00000019548	204 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000000129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000129	-	68	57.554	ENSHCOG00000015689	-	58	57.554
ENSHCOG00000000129	-	83	56.805	ENSHCOG00000011588	-	81	56.805
ENSHCOG00000000129	-	83	56.805	ENSHCOG00000017691	-	81	56.805
ENSHCOG00000000129	-	76	98.710	ENSHCOG00000006864	-	73	98.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000129	-	73	31.081	ENSCPBG00000001920	-	53	31.081	Chrysemys_picta_bellii
ENSHCOG00000000129	-	82	62.874	ENSEBUG00000004867	-	60	62.874	Eptatretus_burgeri
ENSHCOG00000000129	-	73	32.450	ENSEBUG00000006721	-	50	32.450	Eptatretus_burgeri
ENSHCOG00000000129	-	80	31.325	ENSMALG00000021355	-	65	31.325	Monopterus_albus
ENSHCOG00000000129	-	67	32.609	ENSORLG00000022088	-	53	32.609	Oryzias_latipes
ENSHCOG00000000129	-	74	34.194	ENSORLG00015019882	-	62	34.194	Oryzias_latipes_hsok
ENSHCOG00000000129	-	76	62.179	ENSSDUG00000004709	-	88	62.179	Seriola_dumerili
ENSHCOG00000000129	-	81	63.095	ENSSDUG00000021943	-	82	63.095	Seriola_dumerili
ENSHCOG00000000129	-	50	64.356	ENSSLDG00000018145	-	58	64.356	Seriola_lalandi_dorsalis