EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000142 (Gene tree)
Gene ID: 109508009
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 11283 bases
Position: chrKV880514.1:900564-911846
Accession: 109508009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003773	RRM_1	PF00076.22	5.6e-09	1	1
ENSHCOP00000019672	RRM_1	PF00076.22	5.7e-09	1	1
ENSHCOP00000003773	PWI	PF01480.17	1e-11	1	1
ENSHCOP00000019672	PWI	PF01480.17	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008165	-	2337	XM_019857792	ENSHCOP00000003773	778 (aa)	XP_019713351	-
ENSHCOT00000008153	-	4903	-	ENSHCOP00000019672	784 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000000142's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000142	rbm25b	52	75.980	ENSG00000119707	RBM25	100	65.354	Homo_sapiens
ENSHCOG00000000142	rbm25b	57	73.548	ENSAPOG00000017757	rbm25a	100	69.910	Acanthochromis_polyacanthus
ENSHCOG00000000142	rbm25b	57	79.688	ENSAPOG00000015321	rbm25b	100	79.172	Acanthochromis_polyacanthus
ENSHCOG00000000142	rbm25b	52	76.413	ENSAMEG00000016270	RBM25	100	63.164	Ailuropoda_melanoleuca
ENSHCOG00000000142	rbm25b	56	73.207	ENSACIG00000019482	rbm25a	100	67.102	Amphilophus_citrinellus
ENSHCOG00000000142	rbm25b	54	78.089	ENSAOCG00000013695	rbm25a	100	68.983	Amphiprion_ocellaris
ENSHCOG00000000142	rbm25b	57	76.923	ENSAOCG00000019308	rbm25b	100	77.104	Amphiprion_ocellaris
ENSHCOG00000000142	rbm25b	54	78.089	ENSAPEG00000007514	rbm25a	100	69.799	Amphiprion_percula
ENSHCOG00000000142	rbm25b	99	77.904	ENSAPEG00000009666	rbm25b	100	78.436	Amphiprion_percula
ENSHCOG00000000142	rbm25b	56	84.199	ENSATEG00000017312	rbm25b	100	80.840	Anabas_testudineus
ENSHCOG00000000142	rbm25b	57	72.687	ENSATEG00000020676	rbm25a	100	68.067	Anabas_testudineus
ENSHCOG00000000142	rbm25b	52	75.430	ENSAPLG00000006643	RBM25	96	63.705	Anas_platyrhynchos
ENSHCOG00000000142	rbm25b	52	75.735	ENSACAG00000016239	RBM25	53	73.438	Anolis_carolinensis
ENSHCOG00000000142	rbm25b	52	75.980	ENSANAG00000028295	RBM25	100	62.692	Aotus_nancymaae
ENSHCOG00000000142	rbm25b	57	81.111	ENSACLG00000024359	rbm25b	100	77.845	Astatotilapia_calliptera
ENSHCOG00000000142	rbm25b	89	76.256	ENSACLG00000027482	rbm25a	97	72.790	Astatotilapia_calliptera
ENSHCOG00000000142	rbm25b	57	70.127	ENSAMXG00000024525	rbm25b	100	69.048	Astyanax_mexicanus
ENSHCOG00000000142	rbm25b	52	76.225	ENSBTAG00000017177	RBM25	100	63.164	Bos_taurus
ENSHCOG00000000142	rbm25b	53	33.643	WBGene00012245	W04D2.6	86	32.812	Caenorhabditis_elegans
ENSHCOG00000000142	rbm25b	52	76.225	ENSCJAG00000014441	-	100	63.164	Callithrix_jacchus
ENSHCOG00000000142	rbm25b	52	76.471	ENSTSYG00000003024	RBM25	100	63.282	Carlito_syrichta
ENSHCOG00000000142	rbm25b	53	78.409	ENSCAPG00000005239	RBM25	90	76.190	Cavia_aperea
ENSHCOG00000000142	rbm25b	52	76.225	ENSCPOG00000002479	RBM25	100	63.164	Cavia_porcellus
ENSHCOG00000000142	rbm25b	52	76.225	ENSCATG00000039651	RBM25	100	63.164	Cercocebus_atys
ENSHCOG00000000142	rbm25b	52	76.225	ENSCLAG00000003977	RBM25	100	63.164	Chinchilla_lanigera
ENSHCOG00000000142	rbm25b	52	76.225	ENSCSAG00000012801	RBM25	100	63.164	Chlorocebus_sabaeus
ENSHCOG00000000142	rbm25b	66	81.081	ENSCHOG00000008903	RBM25	73	80.282	Choloepus_hoffmanni
ENSHCOG00000000142	rbm25b	55	77.404	ENSCPBG00000011025	RBM25	66	60.077	Chrysemys_picta_bellii
ENSHCOG00000000142	rbm25b	52	69.118	ENSCANG00000043874	RBM25	98	63.542	Colobus_angolensis_palliatus
ENSHCOG00000000142	rbm25b	61	62.500	ENSCGRG00001020817	Rbm25	100	62.928	Cricetulus_griseus_chok1gshd
ENSHCOG00000000142	rbm25b	52	75.980	ENSCGRG00000017595	Rbm25	100	66.746	Cricetulus_griseus_crigri
ENSHCOG00000000142	rbm25b	56	68.009	ENSCSEG00000009430	rbm25a	100	65.909	Cynoglossus_semilaevis
ENSHCOG00000000142	rbm25b	58	78.525	ENSCSEG00000020737	rbm25b	100	77.415	Cynoglossus_semilaevis
ENSHCOG00000000142	rbm25b	99	77.193	ENSCVAG00000003478	rbm25b	100	75.787	Cyprinodon_variegatus
ENSHCOG00000000142	rbm25b	69	77.481	ENSCVAG00000005498	rbm25a	99	74.932	Cyprinodon_variegatus
ENSHCOG00000000142	rbm25b	64	73.805	ENSDARG00000006395	rbm25b	97	70.123	Danio_rerio
ENSHCOG00000000142	rbm25b	52	68.227	ENSDARG00000039266	rbm25a	99	87.342	Danio_rerio
ENSHCOG00000000142	rbm25b	52	75.980	ENSDNOG00000004959	RBM25	100	63.046	Dasypus_novemcinctus
ENSHCOG00000000142	rbm25b	52	76.471	ENSDORG00000013247	Rbm25	100	60.685	Dipodomys_ordii
ENSHCOG00000000142	rbm25b	52	74.265	ENSETEG00000015941	RBM25	100	63.934	Echinops_telfairi
ENSHCOG00000000142	rbm25b	75	37.084	ENSEBUG00000002963	rbm25b	72	41.357	Eptatretus_burgeri
ENSHCOG00000000142	rbm25b	85	77.694	ENSEEUG00000007350	RBM25	91	75.696	Erinaceus_europaeus
ENSHCOG00000000142	rbm25b	58	71.183	ENSELUG00000007730	rbm25b	100	69.477	Esox_lucius
ENSHCOG00000000142	rbm25b	59	73.488	ENSELUG00000021847	rbm25a	100	60.291	Esox_lucius
ENSHCOG00000000142	rbm25b	52	76.225	ENSFCAG00000011716	RBM25	100	63.164	Felis_catus
ENSHCOG00000000142	rbm25b	52	74.755	ENSFALG00000005445	RBM25	100	62.515	Ficedula_albicollis
ENSHCOG00000000142	rbm25b	52	76.225	ENSFDAG00000006542	RBM25	100	63.164	Fukomys_damarensis
ENSHCOG00000000142	rbm25b	57	78.587	ENSFHEG00000003513	rbm25b	100	76.329	Fundulus_heteroclitus
ENSHCOG00000000142	rbm25b	99	64.327	ENSFHEG00000005318	rbm25a	97	67.043	Fundulus_heteroclitus
ENSHCOG00000000142	rbm25b	85	77.320	ENSGMOG00000014097	rbm25b	54	78.475	Gadus_morhua
ENSHCOG00000000142	rbm25b	80	72.861	ENSGMOG00000014070	rbm25a	87	72.082	Gadus_morhua
ENSHCOG00000000142	rbm25b	100	70.416	ENSGAFG00000018036	rbm25a	97	70.025	Gambusia_affinis
ENSHCOG00000000142	rbm25b	98	76.679	ENSGAFG00000001092	rbm25b	100	74.479	Gambusia_affinis
ENSHCOG00000000142	rbm25b	52	70.660	ENSGAGG00000024524	RBM25	96	59.951	Gopherus_agassizii
ENSHCOG00000000142	rbm25b	52	75.980	ENSGGOG00000002415	RBM25	100	63.046	Gorilla_gorilla
ENSHCOG00000000142	rbm25b	55	76.256	ENSHBUG00000016908	rbm25a	100	69.498	Haplochromis_burtoni
ENSHCOG00000000142	rbm25b	57	80.266	ENSHBUG00000018499	rbm25b	100	77.630	Haplochromis_burtoni
ENSHCOG00000000142	rbm25b	52	75.735	ENSHGLG00000014745	RBM25	100	62.928	Heterocephalus_glaber_female
ENSHCOG00000000142	rbm25b	52	76.167	ENSHGLG00100018236	-	99	68.041	Heterocephalus_glaber_male
ENSHCOG00000000142	rbm25b	57	74.444	ENSIPUG00000021051	rbm25b	100	68.486	Ictalurus_punctatus
ENSHCOG00000000142	rbm25b	52	76.225	ENSSTOG00000011117	RBM25	100	63.164	Ictidomys_tridecemlineatus
ENSHCOG00000000142	rbm25b	57	71.247	ENSKMAG00000016242	rbm25a	100	67.949	Kryptolebias_marmoratus
ENSHCOG00000000142	rbm25b	56	80.952	ENSKMAG00000018826	rbm25b	100	79.500	Kryptolebias_marmoratus
ENSHCOG00000000142	rbm25b	100	81.305	ENSLBEG00000010667	rbm25b	100	79.674	Labrus_bergylta
ENSHCOG00000000142	rbm25b	60	72.632	ENSLACG00000011845	RBM25	98	70.370	Latimeria_chalumnae
ENSHCOG00000000142	rbm25b	55	76.018	ENSLOCG00000014196	rbm25b	100	70.639	Lepisosteus_oculatus
ENSHCOG00000000142	rbm25b	52	76.225	ENSMFAG00000040040	RBM25	100	63.164	Macaca_fascicularis
ENSHCOG00000000142	rbm25b	52	76.225	ENSMMUG00000002332	RBM25	98	75.910	Macaca_mulatta
ENSHCOG00000000142	rbm25b	52	76.225	ENSMNEG00000032922	RBM25	100	60.921	Macaca_nemestrina
ENSHCOG00000000142	rbm25b	52	76.225	ENSMLEG00000035157	RBM25	100	63.164	Mandrillus_leucophaeus
ENSHCOG00000000142	rbm25b	57	78.681	ENSMAMG00000004524	rbm25b	100	80.075	Mastacembelus_armatus
ENSHCOG00000000142	rbm25b	51	74.877	ENSMAMG00000000165	rbm25a	100	65.637	Mastacembelus_armatus
ENSHCOG00000000142	rbm25b	55	76.256	ENSMZEG00005011183	rbm25a	99	70.988	Maylandia_zebra
ENSHCOG00000000142	rbm25b	57	80.795	ENSMZEG00005001453	rbm25b	100	77.845	Maylandia_zebra
ENSHCOG00000000142	rbm25b	52	75.616	ENSMGAG00000011707	RBM25	100	64.790	Meleagris_gallopavo
ENSHCOG00000000142	rbm25b	52	75.980	ENSMICG00000034082	RBM25	100	62.692	Microcebus_murinus
ENSHCOG00000000142	rbm25b	52	75.980	ENSMOCG00000001935	Rbm25	100	66.189	Microtus_ochrogaster
ENSHCOG00000000142	rbm25b	56	76.072	ENSMMOG00000009065	rbm25a	100	68.812	Mola_mola
ENSHCOG00000000142	rbm25b	99	80.272	ENSMMOG00000015545	rbm25b	65	76.569	Mola_mola
ENSHCOG00000000142	rbm25b	52	75.980	ENSMODG00000006820	RBM25	99	62.796	Monodelphis_domestica
ENSHCOG00000000142	rbm25b	58	79.783	ENSMALG00000020441	rbm25b	92	77.386	Monopterus_albus
ENSHCOG00000000142	rbm25b	52	75.980	MGP_CAROLIEiJ_G0017921	Rbm25	100	66.983	Mus_caroli
ENSHCOG00000000142	rbm25b	52	75.980	ENSMUSG00000010608	Rbm25	100	66.983	Mus_musculus
ENSHCOG00000000142	rbm25b	52	75.980	MGP_PahariEiJ_G0029677	Rbm25	100	66.983	Mus_pahari
ENSHCOG00000000142	rbm25b	52	75.980	MGP_SPRETEiJ_G0018766	-	99	67.526	Mus_spretus
ENSHCOG00000000142	rbm25b	52	76.225	ENSMPUG00000003698	RBM25	99	67.156	Mustela_putorius_furo
ENSHCOG00000000142	rbm25b	55	71.831	ENSMLUG00000015434	-	57	68.017	Myotis_lucifugus
ENSHCOG00000000142	rbm25b	52	71.883	ENSMLUG00000024167	-	55	68.352	Myotis_lucifugus
ENSHCOG00000000142	rbm25b	52	76.225	ENSNGAG00000018465	Rbm25	100	66.825	Nannospalax_galili
ENSHCOG00000000142	rbm25b	56	75.054	ENSNBRG00000022192	rbm25b	100	74.424	Neolamprologus_brichardi
ENSHCOG00000000142	rbm25b	55	72.893	ENSNBRG00000003761	rbm25a	100	69.498	Neolamprologus_brichardi
ENSHCOG00000000142	rbm25b	52	76.225	ENSNLEG00000002701	RBM25	100	63.164	Nomascus_leucogenys
ENSHCOG00000000142	rbm25b	52	76.225	ENSOANG00000001056	RBM25	98	66.194	Ornithorhynchus_anatinus
ENSHCOG00000000142	rbm25b	91	78.365	ENSOCUG00000013737	RBM25	100	62.810	Oryctolagus_cuniculus
ENSHCOG00000000142	rbm25b	57	78.384	ENSORLG00000011874	rbm25b	99	77.710	Oryzias_latipes
ENSHCOG00000000142	rbm25b	56	82.916	ENSORLG00020016422	rbm25b	100	79.018	Oryzias_latipes_hni
ENSHCOG00000000142	rbm25b	57	78.603	ENSORLG00015011269	rbm25b	99	77.832	Oryzias_latipes_hsok
ENSHCOG00000000142	rbm25b	74	64.809	ENSORLG00015022499	rbm25a	96	54.826	Oryzias_latipes_hsok
ENSHCOG00000000142	rbm25b	52	69.740	ENSOMEG00000022138	rbm25a	97	67.897	Oryzias_melastigma
ENSHCOG00000000142	rbm25b	57	79.295	ENSOMEG00000023172	rbm25b	99	79.748	Oryzias_melastigma
ENSHCOG00000000142	rbm25b	52	76.413	ENSOGAG00000014986	RBM25	96	58.363	Otolemur_garnettii
ENSHCOG00000000142	rbm25b	52	76.225	ENSOARG00000000319	RBM25	100	63.164	Ovis_aries
ENSHCOG00000000142	rbm25b	52	75.980	ENSPPAG00000039402	RBM25	100	63.046	Pan_paniscus
ENSHCOG00000000142	rbm25b	52	76.225	ENSPPRG00000017374	RBM25	100	63.164	Panthera_pardus
ENSHCOG00000000142	rbm25b	52	76.225	ENSPTIG00000017309	RBM25	100	63.164	Panthera_tigris_altaica
ENSHCOG00000000142	rbm25b	52	75.980	ENSPTRG00000006509	RBM25	100	63.046	Pan_troglodytes
ENSHCOG00000000142	rbm25b	52	76.225	ENSPANG00000018212	RBM25	100	63.164	Papio_anubis
ENSHCOG00000000142	rbm25b	56	72.824	ENSPKIG00000003203	rbm25b	100	67.857	Paramormyrops_kingsleyae
ENSHCOG00000000142	rbm25b	52	75.245	ENSPSIG00000006058	RBM25	97	61.944	Pelodiscus_sinensis
ENSHCOG00000000142	rbm25b	58	80.043	ENSPMGG00000015740	rbm25b	100	77.927	Periophthalmus_magnuspinnatus
ENSHCOG00000000142	rbm25b	51	65.672	ENSPMGG00000001791	rbm25a	97	64.286	Periophthalmus_magnuspinnatus
ENSHCOG00000000142	rbm25b	52	69.608	ENSPCIG00000011166	RBM25	55	68.889	Phascolarctos_cinereus
ENSHCOG00000000142	rbm25b	66	69.888	ENSPFOG00000017931	rbm25a	85	77.099	Poecilia_formosa
ENSHCOG00000000142	rbm25b	58	78.337	ENSPFOG00000018808	rbm25b	100	75.805	Poecilia_formosa
ENSHCOG00000000142	rbm25b	100	69.571	ENSPLAG00000018338	rbm25a	97	71.013	Poecilia_latipinna
ENSHCOG00000000142	rbm25b	100	70.379	ENSPMEG00000024470	rbm25a	97	71.266	Poecilia_mexicana
ENSHCOG00000000142	rbm25b	58	78.118	ENSPMEG00000019161	rbm25b	100	75.685	Poecilia_mexicana
ENSHCOG00000000142	rbm25b	58	77.899	ENSPREG00000008522	rbm25b	100	75.743	Poecilia_reticulata
ENSHCOG00000000142	rbm25b	100	70.968	ENSPREG00000009228	rbm25a	97	72.272	Poecilia_reticulata
ENSHCOG00000000142	rbm25b	89	69.811	ENSPCAG00000006226	RBM25	80	73.884	Procavia_capensis
ENSHCOG00000000142	rbm25b	52	75.980	ENSPCOG00000023107	RBM25	100	63.046	Propithecus_coquereli
ENSHCOG00000000142	rbm25b	52	76.225	ENSPVAG00000003931	RBM25	100	60.331	Pteropus_vampyrus
ENSHCOG00000000142	rbm25b	56	74.624	ENSPNYG00000023303	rbm25b	100	74.757	Pundamilia_nyererei
ENSHCOG00000000142	rbm25b	55	76.256	ENSPNYG00000022596	rbm25a	100	68.780	Pundamilia_nyererei
ENSHCOG00000000142	rbm25b	57	72.093	ENSPNAG00000012024	rbm25b	100	70.144	Pygocentrus_nattereri
ENSHCOG00000000142	rbm25b	52	75.735	ENSRNOG00000002871	Rbm25l1	100	68.940	Rattus_norvegicus
ENSHCOG00000000142	rbm25b	52	76.225	ENSRBIG00000039904	RBM25	100	63.164	Rhinopithecus_bieti
ENSHCOG00000000142	rbm25b	52	76.225	ENSRROG00000035556	RBM25	97	75.910	Rhinopithecus_roxellana
ENSHCOG00000000142	rbm25b	59	78.155	ENSSBOG00000034153	RBM25	52	57.778	Saimiri_boliviensis_boliviensis
ENSHCOG00000000142	rbm25b	52	75.980	ENSSHAG00000012859	RBM25	100	62.456	Sarcophilus_harrisii
ENSHCOG00000000142	rbm25b	57	71.175	ENSSFOG00015007093	rbm25	100	67.976	Scleropages_formosus
ENSHCOG00000000142	rbm25b	58	74.946	ENSSMAG00000002520	rbm25b	100	76.087	Scophthalmus_maximus
ENSHCOG00000000142	rbm25b	57	72.907	ENSSMAG00000009745	rbm25a	100	67.870	Scophthalmus_maximus
ENSHCOG00000000142	rbm25b	55	74.091	ENSSDUG00000017984	rbm25a	100	68.884	Seriola_dumerili
ENSHCOG00000000142	rbm25b	55	74.091	ENSSLDG00000010342	rbm25a	100	68.765	Seriola_lalandi_dorsalis
ENSHCOG00000000142	rbm25b	56	81.179	ENSSLDG00000024573	rbm25b	99	79.650	Seriola_lalandi_dorsalis
ENSHCOG00000000142	rbm25b	52	76.225	ENSSARG00000002327	RBM25	100	63.164	Sorex_araneus
ENSHCOG00000000142	rbm25b	55	72.955	ENSSPAG00000011114	rbm25a	97	68.927	Stegastes_partitus
ENSHCOG00000000142	rbm25b	58	80.870	ENSSPAG00000016168	rbm25b	100	78.597	Stegastes_partitus
ENSHCOG00000000142	rbm25b	52	74.265	ENSTGUG00000011246	-	53	72.098	Taeniopygia_guttata
ENSHCOG00000000142	rbm25b	99	80.584	ENSTRUG00000017964	rbm25b	100	79.090	Takifugu_rubripes
ENSHCOG00000000142	rbm25b	57	67.689	ENSTRUG00000003076	rbm25a	100	66.387	Takifugu_rubripes
ENSHCOG00000000142	rbm25b	93	71.204	ENSTNIG00000012222	rbm25b	62	77.500	Tetraodon_nigroviridis
ENSHCOG00000000142	rbm25b	57	78.607	ENSTBEG00000010538	-	55	78.607	Tupaia_belangeri
ENSHCOG00000000142	rbm25b	52	69.363	ENSUAMG00000007707	RBM25	99	74.132	Ursus_americanus
ENSHCOG00000000142	rbm25b	80	75.490	ENSVPAG00000009052	RBM25	80	73.438	Vicugna_pacos
ENSHCOG00000000142	rbm25b	52	76.225	ENSVVUG00000004426	RBM25	98	63.164	Vulpes_vulpes
ENSHCOG00000000142	rbm25b	84	77.295	ENSXETG00000021857	rbm25	58	73.942	Xenopus_tropicalis
ENSHCOG00000000142	rbm25b	100	74.439	ENSXCOG00000002222	rbm25b	100	75.875	Xiphophorus_couchianus
ENSHCOG00000000142	rbm25b	100	70.732	ENSXCOG00000004043	RBM25	97	71.122	Xiphophorus_couchianus
ENSHCOG00000000142	rbm25b	100	68.351	ENSXMAG00000009077	RBM25	97	68.618	Xiphophorus_maculatus
ENSHCOG00000000142	rbm25b	99	77.640	ENSXMAG00000017290	rbm25b	100	76.084	Xiphophorus_maculatus