EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000204 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 8623 bases
Position: chrKV880218.1:3720195-3728817
Accession: 109524282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005279	MIF4G_like	PF09088.11	9.6e-38	1	1
ENSHCOP00000005279	MIF4G_like_2	PF09090.11	3.4e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005641	NCBP1-201	1977	XM_019884041	ENSHCOP00000005279	658 (aa)	XP_019739600	-

Gene Model

Click here to download ENSHCOG00000000204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000204	NCBP1	92	72.222	ENSG00000136937	NCBP1	79	72.222	Homo_sapiens
ENSHCOG00000000204	NCBP1	87	88.702	ENSAPOG00000008002	NCBP1	74	88.702	Acanthochromis_polyacanthus
ENSHCOG00000000204	NCBP1	92	72.540	ENSAMEG00000004763	NCBP1	78	72.540	Ailuropoda_melanoleuca
ENSHCOG00000000204	NCBP1	87	87.690	ENSACIG00000000274	NCBP1	74	87.690	Amphilophus_citrinellus
ENSHCOG00000000204	NCBP1	87	88.870	ENSAOCG00000021148	NCBP1	74	88.870	Amphiprion_ocellaris
ENSHCOG00000000204	NCBP1	87	88.870	ENSAPEG00000001701	NCBP1	74	88.870	Amphiprion_percula
ENSHCOG00000000204	NCBP1	87	88.702	ENSATEG00000006929	NCBP1	74	88.702	Anabas_testudineus
ENSHCOG00000000204	NCBP1	92	72.986	ENSAPLG00000016318	NCBP1	83	73.144	Anas_platyrhynchos
ENSHCOG00000000204	NCBP1	87	75.712	ENSACAG00000004409	NCBP1	69	72.598	Anolis_carolinensis
ENSHCOG00000000204	NCBP1	92	72.222	ENSANAG00000025744	NCBP1	86	72.222	Aotus_nancymaae
ENSHCOG00000000204	NCBP1	87	87.352	ENSACLG00000014812	NCBP1	81	86.341	Astatotilapia_calliptera
ENSHCOG00000000204	NCBP1	87	84.343	ENSAMXG00000016364	NCBP1	75	84.343	Astyanax_mexicanus
ENSHCOG00000000204	NCBP1	92	72.222	ENSBTAG00000009732	NCBP1	79	72.222	Bos_taurus
ENSHCOG00000000204	NCBP1	87	31.588	WBGene00018156	ncbp-1	74	31.097	Caenorhabditis_elegans
ENSHCOG00000000204	NCBP1	92	72.381	ENSCJAG00000010840	NCBP1	86	72.381	Callithrix_jacchus
ENSHCOG00000000204	NCBP1	92	72.540	ENSCAFG00000002445	NCBP1	79	72.540	Canis_familiaris
ENSHCOG00000000204	NCBP1	92	72.540	ENSCAFG00020017997	NCBP1	91	72.540	Canis_lupus_dingo
ENSHCOG00000000204	NCBP1	92	72.381	ENSCHIG00000020139	NCBP1	79	72.381	Capra_hircus
ENSHCOG00000000204	NCBP1	81	61.871	ENSCAPG00000014252	NCBP1	77	61.691	Cavia_aperea
ENSHCOG00000000204	NCBP1	92	72.381	ENSCPOG00000012573	NCBP1	81	72.381	Cavia_porcellus
ENSHCOG00000000204	NCBP1	92	72.222	ENSCCAG00000032297	NCBP1	79	72.222	Cebus_capucinus
ENSHCOG00000000204	NCBP1	92	72.222	ENSCATG00000010052	NCBP1	88	72.222	Cercocebus_atys
ENSHCOG00000000204	NCBP1	92	72.222	ENSCLAG00000014339	NCBP1	79	72.222	Chinchilla_lanigera
ENSHCOG00000000204	NCBP1	92	72.222	ENSCSAG00000010929	NCBP1	79	72.222	Chlorocebus_sabaeus
ENSHCOG00000000204	NCBP1	74	81.132	ENSCHOG00000010332	NCBP1	65	76.522	Choloepus_hoffmanni
ENSHCOG00000000204	NCBP1	91	74.513	ENSCPBG00000024344	NCBP1	84	74.513	Chrysemys_picta_bellii
ENSHCOG00000000204	NCBP1	90	50.564	ENSCING00000008990	-	77	50.564	Ciona_intestinalis
ENSHCOG00000000204	NCBP1	87	50.746	ENSCSAVG00000005300	-	99	54.872	Ciona_savignyi
ENSHCOG00000000204	NCBP1	92	72.222	ENSCANG00000036913	NCBP1	86	72.222	Colobus_angolensis_palliatus
ENSHCOG00000000204	NCBP1	92	72.108	ENSCGRG00001015771	Ncbp1	79	72.108	Cricetulus_griseus_chok1gshd
ENSHCOG00000000204	NCBP1	92	72.108	ENSCGRG00000010311	Ncbp1	80	72.108	Cricetulus_griseus_crigri
ENSHCOG00000000204	NCBP1	87	87.352	ENSCSEG00000012377	NCBP1	82	86.341	Cynoglossus_semilaevis
ENSHCOG00000000204	NCBP1	87	86.700	ENSCVAG00000008795	NCBP1	74	86.700	Cyprinodon_variegatus
ENSHCOG00000000204	NCBP1	92	71.270	ENSDNOG00000006885	NCBP1	91	71.270	Dasypus_novemcinctus
ENSHCOG00000000204	NCBP1	92	71.746	ENSDORG00000013652	Ncbp1	80	71.746	Dipodomys_ordii
ENSHCOG00000000204	NCBP1	67	36.211	FBgn0038887	CG7907	60	36.211	Drosophila_melanogaster
ENSHCOG00000000204	NCBP1	87	53.213	FBgn0022942	Cbp80	74	54.090	Drosophila_melanogaster
ENSHCOG00000000204	NCBP1	77	82.927	ENSETEG00000009705	NCBP1	63	82.927	Echinops_telfairi
ENSHCOG00000000204	NCBP1	91	66.016	ENSEBUG00000008386	NCBP1	77	66.016	Eptatretus_burgeri
ENSHCOG00000000204	NCBP1	92	72.222	ENSEASG00005022795	NCBP1	79	72.222	Equus_asinus_asinus
ENSHCOG00000000204	NCBP1	92	72.381	ENSECAG00000013847	NCBP1	79	72.381	Equus_caballus
ENSHCOG00000000204	NCBP1	86	65.936	ENSEEUG00000015973	NCBP1	77	66.105	Erinaceus_europaeus
ENSHCOG00000000204	NCBP1	87	84.317	ENSELUG00000022519	NCBP1	77	84.317	Esox_lucius
ENSHCOG00000000204	NCBP1	92	72.381	ENSFCAG00000001206	NCBP1	79	72.381	Felis_catus
ENSHCOG00000000204	NCBP1	92	73.144	ENSFALG00000001193	NCBP1	80	73.144	Ficedula_albicollis
ENSHCOG00000000204	NCBP1	92	71.905	ENSFDAG00000010864	NCBP1	80	71.905	Fukomys_damarensis
ENSHCOG00000000204	NCBP1	87	87.037	ENSFHEG00000000655	NCBP1	74	87.037	Fundulus_heteroclitus
ENSHCOG00000000204	NCBP1	87	85.666	ENSGMOG00000008653	NCBP1	74	85.666	Gadus_morhua
ENSHCOG00000000204	NCBP1	91	74.188	ENSGALG00000002087	NCBP1	77	74.351	Gallus_gallus
ENSHCOG00000000204	NCBP1	87	87.542	ENSGAFG00000017787	NCBP1	74	87.542	Gambusia_affinis
ENSHCOG00000000204	NCBP1	91	84.304	ENSGACG00000016772	NCBP1	76	84.304	Gasterosteus_aculeatus
ENSHCOG00000000204	NCBP1	91	74.513	ENSGAGG00000019483	NCBP1	84	74.513	Gopherus_agassizii
ENSHCOG00000000204	NCBP1	92	72.222	ENSGGOG00000001376	NCBP1	86	72.222	Gorilla_gorilla
ENSHCOG00000000204	NCBP1	87	87.352	ENSHBUG00000020843	NCBP1	74	87.352	Haplochromis_burtoni
ENSHCOG00000000204	NCBP1	86	69.349	ENSHGLG00000018112	-	73	69.349	Heterocephalus_glaber_female
ENSHCOG00000000204	NCBP1	92	72.222	ENSHGLG00000001882	NCBP1	79	72.222	Heterocephalus_glaber_female
ENSHCOG00000000204	NCBP1	92	72.222	ENSHGLG00100013014	NCBP1	79	72.222	Heterocephalus_glaber_male
ENSHCOG00000000204	NCBP1	86	69.349	ENSHGLG00100017373	-	73	69.349	Heterocephalus_glaber_male
ENSHCOG00000000204	NCBP1	87	83.980	ENSIPUG00000007275	ncbp1	74	83.980	Ictalurus_punctatus
ENSHCOG00000000204	NCBP1	92	72.381	ENSSTOG00000002695	NCBP1	79	72.381	Ictidomys_tridecemlineatus
ENSHCOG00000000204	NCBP1	87	87.015	ENSKMAG00000003594	NCBP1	74	87.015	Kryptolebias_marmoratus
ENSHCOG00000000204	NCBP1	87	85.596	ENSLBEG00000011661	NCBP1	75	85.596	Labrus_bergylta
ENSHCOG00000000204	NCBP1	87	68.227	ENSLACG00000013955	NCBP1	74	68.227	Latimeria_chalumnae
ENSHCOG00000000204	NCBP1	87	77.052	ENSLOCG00000009579	NCBP1	74	77.052	Lepisosteus_oculatus
ENSHCOG00000000204	NCBP1	92	72.222	ENSLAFG00000005999	NCBP1	79	72.222	Loxodonta_africana
ENSHCOG00000000204	NCBP1	92	72.222	ENSMFAG00000030994	NCBP1	88	72.222	Macaca_fascicularis
ENSHCOG00000000204	NCBP1	92	72.222	ENSMMUG00000012281	NCBP1	88	72.222	Macaca_mulatta
ENSHCOG00000000204	NCBP1	92	72.222	ENSMNEG00000042790	NCBP1	79	72.222	Macaca_nemestrina
ENSHCOG00000000204	NCBP1	92	72.222	ENSMLEG00000030374	NCBP1	86	72.222	Mandrillus_leucophaeus
ENSHCOG00000000204	NCBP1	87	87.015	ENSMAMG00000014806	NCBP1	75	87.015	Mastacembelus_armatus
ENSHCOG00000000204	NCBP1	87	84.992	ENSMZEG00005009290	-	76	84.992	Maylandia_zebra
ENSHCOG00000000204	NCBP1	87	87.352	ENSMZEG00005003469	NCBP1	74	87.352	Maylandia_zebra
ENSHCOG00000000204	NCBP1	92	72.108	ENSMAUG00000020583	Ncbp1	79	72.108	Mesocricetus_auratus
ENSHCOG00000000204	NCBP1	92	71.746	ENSMICG00000012682	NCBP1	79	71.746	Microcebus_murinus
ENSHCOG00000000204	NCBP1	92	72.108	ENSMOCG00000015818	Ncbp1	79	72.108	Microtus_ochrogaster
ENSHCOG00000000204	NCBP1	87	86.847	ENSMMOG00000002610	NCBP1	82	86.847	Mola_mola
ENSHCOG00000000204	NCBP1	91	73.701	ENSMODG00000003202	NCBP1	76	74.188	Monodelphis_domestica
ENSHCOG00000000204	NCBP1	87	87.690	ENSMALG00000003547	NCBP1	74	87.690	Monopterus_albus
ENSHCOG00000000204	NCBP1	92	72.108	MGP_CAROLIEiJ_G0025982	Ncbp1	79	72.108	Mus_caroli
ENSHCOG00000000204	NCBP1	92	72.108	ENSMUSG00000028330	Ncbp1	79	72.108	Mus_musculus
ENSHCOG00000000204	NCBP1	92	72.108	MGP_PahariEiJ_G0028318	Ncbp1	79	72.108	Mus_pahari
ENSHCOG00000000204	NCBP1	92	72.108	MGP_SPRETEiJ_G0026945	Ncbp1	79	72.108	Mus_spretus
ENSHCOG00000000204	NCBP1	92	72.381	ENSMPUG00000006399	NCBP1	79	72.381	Mustela_putorius_furo
ENSHCOG00000000204	NCBP1	92	71.429	ENSMLUG00000015201	NCBP1	80	71.429	Myotis_lucifugus
ENSHCOG00000000204	NCBP1	92	72.583	ENSNGAG00000014101	Ncbp1	79	72.583	Nannospalax_galili
ENSHCOG00000000204	NCBP1	61	87.500	ENSNBRG00000014674	NCBP1	64	87.500	Neolamprologus_brichardi
ENSHCOG00000000204	NCBP1	92	72.222	ENSNLEG00000016909	NCBP1	88	72.222	Nomascus_leucogenys
ENSHCOG00000000204	NCBP1	79	74.449	ENSMEUG00000010672	NCBP1	68	75.330	Notamacropus_eugenii
ENSHCOG00000000204	NCBP1	86	65.599	ENSOPRG00000002144	-	78	65.767	Ochotona_princeps
ENSHCOG00000000204	NCBP1	92	72.266	ENSODEG00000003232	NCBP1	79	72.266	Octodon_degus
ENSHCOG00000000204	NCBP1	87	87.521	ENSONIG00000001502	NCBP1	74	87.521	Oreochromis_niloticus
ENSHCOG00000000204	NCBP1	66	72.967	ENSOANG00000001918	NCBP1	73	72.967	Ornithorhynchus_anatinus
ENSHCOG00000000204	NCBP1	89	71.987	ENSOCUG00000013853	NCBP1	76	71.987	Oryctolagus_cuniculus
ENSHCOG00000000204	NCBP1	87	87.690	ENSORLG00000011008	NCBP1	82	87.690	Oryzias_latipes
ENSHCOG00000000204	NCBP1	87	87.584	ENSORLG00020017455	NCBP1	82	80.929	Oryzias_latipes_hni
ENSHCOG00000000204	NCBP1	87	87.416	ENSORLG00015012127	NCBP1	75	87.416	Oryzias_latipes_hsok
ENSHCOG00000000204	NCBP1	87	87.919	ENSOMEG00000020698	NCBP1	75	87.919	Oryzias_melastigma
ENSHCOG00000000204	NCBP1	92	72.381	ENSOGAG00000013888	NCBP1	78	72.381	Otolemur_garnettii
ENSHCOG00000000204	NCBP1	92	72.381	ENSOARG00000011233	NCBP1	79	72.381	Ovis_aries
ENSHCOG00000000204	NCBP1	92	72.222	ENSPPAG00000026462	NCBP1	86	72.222	Pan_paniscus
ENSHCOG00000000204	NCBP1	92	72.540	ENSPPRG00000022574	NCBP1	79	72.540	Panthera_pardus
ENSHCOG00000000204	NCBP1	92	72.540	ENSPTIG00000018507	NCBP1	79	72.540	Panthera_tigris_altaica
ENSHCOG00000000204	NCBP1	92	72.222	ENSPTRG00000021167	NCBP1	79	72.222	Pan_troglodytes
ENSHCOG00000000204	NCBP1	92	72.222	ENSPANG00000025591	NCBP1	88	72.222	Papio_anubis
ENSHCOG00000000204	NCBP1	87	80.405	ENSPKIG00000015861	NCBP1	78	80.405	Paramormyrops_kingsleyae
ENSHCOG00000000204	NCBP1	75	75.781	ENSPSIG00000009558	NCBP1	99	75.781	Pelodiscus_sinensis
ENSHCOG00000000204	NCBP1	87	85.569	ENSPMGG00000020476	NCBP1	74	85.569	Periophthalmus_magnuspinnatus
ENSHCOG00000000204	NCBP1	92	71.949	ENSPEMG00000020105	Ncbp1	79	71.949	Peromyscus_maniculatus_bairdii
ENSHCOG00000000204	NCBP1	87	60.403	ENSPMAG00000005533	NCBP1	74	60.403	Petromyzon_marinus
ENSHCOG00000000204	NCBP1	91	73.864	ENSPCIG00000015800	NCBP1	76	74.351	Phascolarctos_cinereus
ENSHCOG00000000204	NCBP1	87	87.752	ENSPFOG00000004158	NCBP1	75	87.752	Poecilia_formosa
ENSHCOG00000000204	NCBP1	87	88.047	ENSPLAG00000020002	NCBP1	74	88.047	Poecilia_latipinna
ENSHCOG00000000204	NCBP1	87	87.879	ENSPMEG00000019821	NCBP1	74	87.879	Poecilia_mexicana
ENSHCOG00000000204	NCBP1	87	87.710	ENSPREG00000006035	NCBP1	75	87.710	Poecilia_reticulata
ENSHCOG00000000204	NCBP1	92	72.222	ENSPPYG00000019426	NCBP1	79	72.222	Pongo_abelii
ENSHCOG00000000204	NCBP1	78	69.403	ENSPCAG00000009943	NCBP1	64	69.403	Procavia_capensis
ENSHCOG00000000204	NCBP1	80	76.433	ENSPCOG00000020024	NCBP1	80	76.645	Propithecus_coquereli
ENSHCOG00000000204	NCBP1	92	72.222	ENSPVAG00000005924	NCBP1	79	72.222	Pteropus_vampyrus
ENSHCOG00000000204	NCBP1	87	86.341	ENSPNYG00000002140	NCBP1	81	86.341	Pundamilia_nyererei
ENSHCOG00000000204	NCBP1	87	83.980	ENSPNAG00000027753	NCBP1	81	83.980	Pygocentrus_nattereri
ENSHCOG00000000204	NCBP1	92	72.108	ENSRNOG00000023605	Ncbp1	79	72.108	Rattus_norvegicus
ENSHCOG00000000204	NCBP1	92	72.222	ENSRBIG00000043175	NCBP1	88	72.222	Rhinopithecus_bieti
ENSHCOG00000000204	NCBP1	92	72.222	ENSRROG00000029767	NCBP1	88	71.429	Rhinopithecus_roxellana
ENSHCOG00000000204	NCBP1	92	72.222	ENSSBOG00000019378	NCBP1	86	69.048	Saimiri_boliviensis_boliviensis
ENSHCOG00000000204	NCBP1	91	45.455	ENSSHAG00000015882	NCBP1	75	45.779	Sarcophilus_harrisii
ENSHCOG00000000204	NCBP1	87	80.743	ENSSFOG00015001872	NCBP1	75	80.743	Scleropages_formosus
ENSHCOG00000000204	NCBP1	87	86.172	ENSSMAG00000007463	NCBP1	74	86.172	Scophthalmus_maximus
ENSHCOG00000000204	NCBP1	87	87.690	ENSSDUG00000007019	NCBP1	74	87.690	Seriola_dumerili
ENSHCOG00000000204	NCBP1	87	88.533	ENSSLDG00000021924	NCBP1	74	88.533	Seriola_lalandi_dorsalis
ENSHCOG00000000204	NCBP1	79	69.978	ENSSARG00000007274	NCBP1	66	69.978	Sorex_araneus
ENSHCOG00000000204	NCBP1	91	68.272	ENSSPUG00000008609	NCBP1	76	68.272	Sphenodon_punctatus
ENSHCOG00000000204	NCBP1	87	89.207	ENSSPAG00000012550	NCBP1	74	89.207	Stegastes_partitus
ENSHCOG00000000204	NCBP1	92	72.381	ENSSSCG00000005366	NCBP1	79	72.381	Sus_scrofa
ENSHCOG00000000204	NCBP1	92	66.984	ENSTGUG00000001472	NCBP1	79	67.302	Taeniopygia_guttata
ENSHCOG00000000204	NCBP1	87	85.835	ENSTRUG00000005287	NCBP1	74	85.835	Takifugu_rubripes
ENSHCOG00000000204	NCBP1	92	69.048	ENSTBEG00000004035	NCBP1	79	69.048	Tupaia_belangeri
ENSHCOG00000000204	NCBP1	71	77.070	ENSTTRG00000000507	NCBP1	59	77.070	Tursiops_truncatus
ENSHCOG00000000204	NCBP1	92	72.381	ENSUAMG00000005471	NCBP1	79	72.381	Ursus_americanus
ENSHCOG00000000204	NCBP1	92	72.381	ENSUMAG00000011865	NCBP1	91	72.540	Ursus_maritimus
ENSHCOG00000000204	NCBP1	92	72.381	ENSVPAG00000010537	NCBP1	79	72.540	Vicugna_pacos
ENSHCOG00000000204	NCBP1	92	72.540	ENSVVUG00000019725	NCBP1	79	72.540	Vulpes_vulpes
ENSHCOG00000000204	NCBP1	91	73.008	ENSXETG00000010179	ncbp1	77	73.008	Xenopus_tropicalis
ENSHCOG00000000204	NCBP1	87	87.205	ENSXMAG00000018253	NCBP1	74	87.205	Xiphophorus_maculatus