EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000218 (Gene tree)
Gene ID: 109515894
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4589 bases
Position: chrKV879952.1:2099394-2103982
Accession: 109515894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020787	PTS_2-RNA	PF01885.16	5.1e-65	1	1
ENSHCOP00000005489	PTS_2-RNA	PF01885.16	8.9e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005302	-	702	XM_019870004	ENSHCOP00000020787	231 (aa)	XP_019725563	UPI00094F2C01
ENSHCOT00000005297	-	2179	XM_019870005	ENSHCOP00000005489	281 (aa)	XP_019725564	-

Gene Model

Click here to download ENSHCOG00000000218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000218	trpt1	100	53.247	ENSG00000149743	TRPT1	88	55.030	Homo_sapiens
ENSHCOG00000000218	trpt1	89	78.155	ENSAPOG00000012925	trpt1	90	78.155	Acanthochromis_polyacanthus
ENSHCOG00000000218	trpt1	90	57.212	ENSAMEG00000018040	TRPT1	83	55.924	Ailuropoda_melanoleuca
ENSHCOG00000000218	trpt1	85	79.695	ENSACIG00000022413	trpt1	89	79.602	Amphilophus_citrinellus
ENSHCOG00000000218	trpt1	89	79.126	ENSAOCG00000001163	trpt1	78	79.126	Amphiprion_ocellaris
ENSHCOG00000000218	trpt1	89	79.612	ENSAPEG00000009873	trpt1	90	79.612	Amphiprion_percula
ENSHCOG00000000218	trpt1	90	81.159	ENSATEG00000014371	trpt1	91	81.159	Anabas_testudineus
ENSHCOG00000000218	trpt1	89	57.073	ENSACAG00000000696	TRPT1	91	57.073	Anolis_carolinensis
ENSHCOG00000000218	trpt1	97	54.978	ENSANAG00000019580	TRPT1	81	57.212	Aotus_nancymaae
ENSHCOG00000000218	trpt1	89	80.583	ENSACLG00000016893	trpt1	90	80.583	Astatotilapia_calliptera
ENSHCOG00000000218	trpt1	89	70.874	ENSAMXG00000010533	trpt1	88	72.000	Astyanax_mexicanus
ENSHCOG00000000218	trpt1	99	55.085	ENSBTAG00000016555	TRPT1	90	54.595	Bos_taurus
ENSHCOG00000000218	trpt1	94	54.795	ENSCJAG00000018169	TRPT1	82	55.714	Callithrix_jacchus
ENSHCOG00000000218	trpt1	90	56.731	ENSCAFG00000014591	TRPT1	84	54.762	Canis_familiaris
ENSHCOG00000000218	trpt1	90	56.731	ENSCAFG00020014101	TRPT1	84	56.731	Canis_lupus_dingo
ENSHCOG00000000218	trpt1	97	55.172	ENSCHIG00000021308	TRPT1	83	57.212	Capra_hircus
ENSHCOG00000000218	trpt1	77	52.247	ENSTSYG00000026766	TRPT1	88	52.514	Carlito_syrichta
ENSHCOG00000000218	trpt1	91	54.502	ENSCAPG00000016934	TRPT1	86	55.072	Cavia_aperea
ENSHCOG00000000218	trpt1	94	54.167	ENSCPOG00000002923	TRPT1	82	55.556	Cavia_porcellus
ENSHCOG00000000218	trpt1	77	56.180	ENSCCAG00000025683	TRPT1	88	56.180	Cebus_capucinus
ENSHCOG00000000218	trpt1	97	53.017	ENSCATG00000031563	TRPT1	82	54.545	Cercocebus_atys
ENSHCOG00000000218	trpt1	94	53.704	ENSCLAG00000016380	TRPT1	82	54.589	Chinchilla_lanigera
ENSHCOG00000000218	trpt1	97	53.680	ENSCSAG00000006952	TRPT1	81	55.288	Chlorocebus_sabaeus
ENSHCOG00000000218	trpt1	62	41.096	ENSCING00000002405	-	83	40.506	Ciona_intestinalis
ENSHCOG00000000218	trpt1	85	40.796	ENSCING00000024241	-	81	40.796	Ciona_intestinalis
ENSHCOG00000000218	trpt1	91	41.704	ENSCSAVG00000003949	-	89	43.781	Ciona_savignyi
ENSHCOG00000000218	trpt1	87	39.512	ENSCSAVG00000011071	-	66	38.967	Ciona_savignyi
ENSHCOG00000000218	trpt1	100	53.219	ENSCANG00000042980	TRPT1	82	55.502	Colobus_angolensis_palliatus
ENSHCOG00000000218	trpt1	95	54.955	ENSCGRG00001008474	Trpt1	83	55.769	Cricetulus_griseus_chok1gshd
ENSHCOG00000000218	trpt1	95	54.955	ENSCGRG00000009793	Trpt1	83	55.769	Cricetulus_griseus_crigri
ENSHCOG00000000218	trpt1	87	76.238	ENSCSEG00000005840	trpt1	89	75.362	Cynoglossus_semilaevis
ENSHCOG00000000218	trpt1	96	75.225	ENSCVAG00000006318	trpt1	95	76.471	Cyprinodon_variegatus
ENSHCOG00000000218	trpt1	87	68.500	ENSDARG00000037628	trpt1	89	68.500	Danio_rerio
ENSHCOG00000000218	trpt1	95	45.455	ENSDNOG00000044923	TRPT1	70	46.939	Dasypus_novemcinctus
ENSHCOG00000000218	trpt1	99	51.304	ENSDORG00000001624	Trpt1	84	53.140	Dipodomys_ordii
ENSHCOG00000000218	trpt1	83	41.753	FBgn0053057	CG33057	90	41.753	Drosophila_melanogaster
ENSHCOG00000000218	trpt1	94	50.459	ENSEBUG00000012569	-	90	52.941	Eptatretus_burgeri
ENSHCOG00000000218	trpt1	96	54.505	ENSEASG00005019983	TRPT1	81	56.250	Equus_asinus_asinus
ENSHCOG00000000218	trpt1	96	54.054	ENSECAG00000009917	TRPT1	89	54.680	Equus_caballus
ENSHCOG00000000218	trpt1	94	55.760	ENSEEUG00000012739	TRPT1	82	56.731	Erinaceus_europaeus
ENSHCOG00000000218	trpt1	89	72.330	ENSELUG00000007385	trpt1	90	72.330	Esox_lucius
ENSHCOG00000000218	trpt1	94	55.300	ENSFCAG00000024621	TRPT1	88	53.846	Felis_catus
ENSHCOG00000000218	trpt1	95	52.915	ENSFDAG00000002738	TRPT1	82	53.140	Fukomys_damarensis
ENSHCOG00000000218	trpt1	90	78.744	ENSFHEG00000002434	trpt1	90	78.744	Fundulus_heteroclitus
ENSHCOG00000000218	trpt1	87	70.792	ENSGMOG00000008716	trpt1	98	70.792	Gadus_morhua
ENSHCOG00000000218	trpt1	87	52.475	ENSGALG00000050256	TRPT1	72	50.926	Gallus_gallus
ENSHCOG00000000218	trpt1	90	76.812	ENSGAFG00000016762	trpt1	92	76.812	Gambusia_affinis
ENSHCOG00000000218	trpt1	87	75.500	ENSGACG00000016927	trpt1	95	75.581	Gasterosteus_aculeatus
ENSHCOG00000000218	trpt1	100	53.680	ENSGGOG00000012163	TRPT1	81	56.039	Gorilla_gorilla
ENSHCOG00000000218	trpt1	89	81.068	ENSHBUG00000012772	trpt1	90	81.068	Haplochromis_burtoni
ENSHCOG00000000218	trpt1	94	52.995	ENSHGLG00000013748	TRPT1	82	53.846	Heterocephalus_glaber_female
ENSHCOG00000000218	trpt1	94	52.995	ENSHGLG00100013048	TRPT1	82	53.846	Heterocephalus_glaber_male
ENSHCOG00000000218	trpt1	90	64.734	ENSIPUG00000002573	trpt1	90	64.734	Ictalurus_punctatus
ENSHCOG00000000218	trpt1	97	53.247	ENSSTOG00000014285	TRPT1	82	56.250	Ictidomys_tridecemlineatus
ENSHCOG00000000218	trpt1	97	54.667	ENSJJAG00000010855	Trpt1	83	56.522	Jaculus_jaculus
ENSHCOG00000000218	trpt1	90	75.845	ENSKMAG00000004214	trpt1	90	75.845	Kryptolebias_marmoratus
ENSHCOG00000000218	trpt1	89	79.512	ENSLBEG00000005640	trpt1	89	80.788	Labrus_bergylta
ENSHCOG00000000218	trpt1	89	58.049	ENSLACG00000016922	TRPT1	85	57.767	Latimeria_chalumnae
ENSHCOG00000000218	trpt1	90	64.734	ENSLOCG00000001345	trpt1	84	64.734	Lepisosteus_oculatus
ENSHCOG00000000218	trpt1	100	53.448	ENSLAFG00000009075	TRPT1	81	56.250	Loxodonta_africana
ENSHCOG00000000218	trpt1	97	53.017	ENSMFAG00000036828	TRPT1	82	54.545	Macaca_fascicularis
ENSHCOG00000000218	trpt1	97	53.043	ENSMMUG00000012940	TRPT1	81	55.072	Macaca_mulatta
ENSHCOG00000000218	trpt1	97	53.017	ENSMNEG00000033348	TRPT1	82	54.545	Macaca_nemestrina
ENSHCOG00000000218	trpt1	97	53.017	ENSMLEG00000031438	TRPT1	82	54.545	Mandrillus_leucophaeus
ENSHCOG00000000218	trpt1	89	82.039	ENSMAMG00000021617	trpt1	90	82.039	Mastacembelus_armatus
ENSHCOG00000000218	trpt1	89	81.068	ENSMZEG00005004773	trpt1	90	81.068	Maylandia_zebra
ENSHCOG00000000218	trpt1	74	55.233	ENSMAUG00000014107	Trpt1	82	55.233	Mesocricetus_auratus
ENSHCOG00000000218	trpt1	94	55.760	ENSMICG00000016950	TRPT1	81	56.250	Microcebus_murinus
ENSHCOG00000000218	trpt1	95	55.856	ENSMOCG00000021342	Trpt1	83	56.731	Microtus_ochrogaster
ENSHCOG00000000218	trpt1	87	81.500	ENSMMOG00000002896	trpt1	87	81.281	Mola_mola
ENSHCOG00000000218	trpt1	90	56.522	ENSMODG00000010226	TRPT1	89	57.360	Monodelphis_domestica
ENSHCOG00000000218	trpt1	89	81.068	ENSMALG00000012208	trpt1	83	81.068	Monopterus_albus
ENSHCOG00000000218	trpt1	97	53.333	MGP_CAROLIEiJ_G0022627	Trpt1	83	55.072	Mus_caroli
ENSHCOG00000000218	trpt1	97	53.333	ENSMUSG00000047656	Trpt1	83	55.072	Mus_musculus
ENSHCOG00000000218	trpt1	97	53.982	MGP_PahariEiJ_G0014121	Trpt1	83	55.288	Mus_pahari
ENSHCOG00000000218	trpt1	97	53.778	MGP_SPRETEiJ_G0023537	Trpt1	83	55.556	Mus_spretus
ENSHCOG00000000218	trpt1	96	53.478	ENSMPUG00000013272	TRPT1	75	55.072	Mustela_putorius_furo
ENSHCOG00000000218	trpt1	90	56.731	ENSMLUG00000024858	TRPT1	82	56.731	Myotis_lucifugus
ENSHCOG00000000218	trpt1	78	53.846	ENSNGAG00000007665	Trpt1	88	53.846	Nannospalax_galili
ENSHCOG00000000218	trpt1	89	75.566	ENSNBRG00000001528	trpt1	90	75.566	Neolamprologus_brichardi
ENSHCOG00000000218	trpt1	88	44.878	ENSNLEG00000033525	-	88	43.094	Nomascus_leucogenys
ENSHCOG00000000218	trpt1	90	56.522	ENSMEUG00000000943	TRPT1	82	56.522	Notamacropus_eugenii
ENSHCOG00000000218	trpt1	91	57.075	ENSOPRG00000015917	TRPT1	83	55.981	Ochotona_princeps
ENSHCOG00000000218	trpt1	97	54.545	ENSODEG00000015724	TRPT1	83	56.731	Octodon_degus
ENSHCOG00000000218	trpt1	89	80.583	ENSONIG00000005333	trpt1	90	80.583	Oreochromis_niloticus
ENSHCOG00000000218	trpt1	87	49.510	ENSOANG00000010375	TRPT1	90	49.268	Ornithorhynchus_anatinus
ENSHCOG00000000218	trpt1	94	56.221	ENSOCUG00000022244	TRPT1	82	57.212	Oryctolagus_cuniculus
ENSHCOG00000000218	trpt1	94	76.147	ENSORLG00000025159	trpt1	93	77.670	Oryzias_latipes
ENSHCOG00000000218	trpt1	95	75.113	ENSORLG00020018944	trpt1	92	76.812	Oryzias_latipes_hni
ENSHCOG00000000218	trpt1	83	73.822	ENSORLG00015017108	trpt1	85	73.822	Oryzias_latipes_hsok
ENSHCOG00000000218	trpt1	97	74.554	ENSOMEG00000018645	trpt1	92	76.329	Oryzias_melastigma
ENSHCOG00000000218	trpt1	100	53.017	ENSOGAG00000007134	TRPT1	82	55.769	Otolemur_garnettii
ENSHCOG00000000218	trpt1	97	55.172	ENSOARG00000004961	TRPT1	81	57.212	Ovis_aries
ENSHCOG00000000218	trpt1	81	52.128	ENSPPAG00000027600	TRPT1	88	53.591	Pan_paniscus
ENSHCOG00000000218	trpt1	78	54.396	ENSPPRG00000022870	TRPT1	88	54.396	Panthera_pardus
ENSHCOG00000000218	trpt1	77	55.056	ENSPTIG00000018872	TRPT1	86	55.056	Panthera_tigris_altaica
ENSHCOG00000000218	trpt1	81	52.128	ENSPTRG00000003822	TRPT1	88	53.591	Pan_troglodytes
ENSHCOG00000000218	trpt1	97	53.448	ENSPANG00000011001	TRPT1	82	55.024	Papio_anubis
ENSHCOG00000000218	trpt1	89	67.961	ENSPKIG00000008323	trpt1	89	67.961	Paramormyrops_kingsleyae
ENSHCOG00000000218	trpt1	95	55.909	ENSPSIG00000009910	TRPT1	87	57.488	Pelodiscus_sinensis
ENSHCOG00000000218	trpt1	87	74.257	ENSPMGG00000005037	trpt1	90	74.129	Periophthalmus_magnuspinnatus
ENSHCOG00000000218	trpt1	95	54.955	ENSPEMG00000013720	Trpt1	83	55.769	Peromyscus_maniculatus_bairdii
ENSHCOG00000000218	trpt1	88	56.158	ENSPMAG00000001449	trpt1	97	56.158	Petromyzon_marinus
ENSHCOG00000000218	trpt1	90	57.488	ENSPCIG00000008060	TRPT1	83	57.488	Phascolarctos_cinereus
ENSHCOG00000000218	trpt1	90	77.295	ENSPFOG00000009475	trpt1	92	77.295	Poecilia_formosa
ENSHCOG00000000218	trpt1	90	77.295	ENSPMEG00000003682	trpt1	92	77.295	Poecilia_mexicana
ENSHCOG00000000218	trpt1	90	78.261	ENSPREG00000015408	trpt1	92	78.261	Poecilia_reticulata
ENSHCOG00000000218	trpt1	90	56.522	ENSPPYG00000003116	TRPT1	81	56.522	Pongo_abelii
ENSHCOG00000000218	trpt1	94	54.630	ENSPCAG00000000762	TRPT1	82	56.039	Procavia_capensis
ENSHCOG00000000218	trpt1	94	55.300	ENSPCOG00000010370	TRPT1	81	55.769	Propithecus_coquereli
ENSHCOG00000000218	trpt1	89	75.113	ENSPNYG00000014805	trpt1	90	75.113	Pundamilia_nyererei
ENSHCOG00000000218	trpt1	89	69.417	ENSPNAG00000008548	trpt1	91	69.417	Pygocentrus_nattereri
ENSHCOG00000000218	trpt1	95	53.604	ENSRNOG00000023023	Trpt1	83	54.327	Rattus_norvegicus
ENSHCOG00000000218	trpt1	100	52.814	ENSRBIG00000040432	TRPT1	81	55.072	Rhinopithecus_bieti
ENSHCOG00000000218	trpt1	100	53.680	ENSRROG00000044905	TRPT1	81	56.039	Rhinopithecus_roxellana
ENSHCOG00000000218	trpt1	78	37.234	YOL102C	TPT1	81	37.234	Saccharomyces_cerevisiae
ENSHCOG00000000218	trpt1	94	55.760	ENSSBOG00000021466	TRPT1	81	56.250	Saimiri_boliviensis_boliviensis
ENSHCOG00000000218	trpt1	90	67.633	ENSSFOG00015005844	trpt1	92	67.633	Scleropages_formosus
ENSHCOG00000000218	trpt1	89	78.641	ENSSMAG00000017744	trpt1	91	78.641	Scophthalmus_maximus
ENSHCOG00000000218	trpt1	89	81.553	ENSSDUG00000017106	trpt1	91	81.553	Seriola_dumerili
ENSHCOG00000000218	trpt1	87	81.000	ENSSLDG00000015957	trpt1	82	82.632	Seriola_lalandi_dorsalis
ENSHCOG00000000218	trpt1	82	74.211	ENSSPAG00000007557	trpt1	76	74.479	Stegastes_partitus
ENSHCOG00000000218	trpt1	97	55.752	ENSSSCG00000013040	TRPT1	79	58.173	Sus_scrofa
ENSHCOG00000000218	trpt1	89	79.126	ENSTRUG00000023723	trpt1	89	79.126	Takifugu_rubripes
ENSHCOG00000000218	trpt1	90	79.227	ENSTNIG00000003381	trpt1	90	79.227	Tetraodon_nigroviridis
ENSHCOG00000000218	trpt1	100	50.649	ENSTBEG00000006023	TRPT1	81	53.140	Tupaia_belangeri
ENSHCOG00000000218	trpt1	97	52.174	ENSTTRG00000010252	TRPT1	83	53.333	Tursiops_truncatus
ENSHCOG00000000218	trpt1	94	57.604	ENSUAMG00000015208	TRPT1	83	56.872	Ursus_americanus
ENSHCOG00000000218	trpt1	94	57.604	ENSUMAG00000001410	TRPT1	83	56.872	Ursus_maritimus
ENSHCOG00000000218	trpt1	94	55.760	ENSVVUG00000029774	TRPT1	85	56.731	Vulpes_vulpes
ENSHCOG00000000218	trpt1	96	56.054	ENSXETG00000007196	trpt1	89	57.212	Xenopus_tropicalis
ENSHCOG00000000218	trpt1	89	75.243	ENSXCOG00000001614	trpt1	87	77.720	Xiphophorus_couchianus
ENSHCOG00000000218	trpt1	89	78.641	ENSXMAG00000003142	trpt1	92	78.641	Xiphophorus_maculatus