EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000219 (Gene tree)
Gene ID: 109526442
Gene Symbol: mrpl28
Alias: wu:fa96b11|zgc:110013
Full Name: mitochondrial ribosomal protein L28
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2606 bases
Position: chrKV880257.1:588821-591426
Accession: 109526442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020775	Ribosomal_L28	PF00830.19	4.2e-07	1	1
ENSHCOP00000020785	Ribosomal_L28	PF00830.19	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005317	-	1056	XM_019887741	ENSHCOP00000020775	251 (aa)	XP_019743300	UPI00094E1456
ENSHCOT00000005322	-	849	-	ENSHCOP00000020785	282 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000000219's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000219	mrpl28	100	64.683	ENSG00000086504	MRPL28	100	68.349	Homo_sapiens
ENSHCOG00000000219	mrpl28	100	81.275	ENSAPOG00000016883	mrpl28	100	81.275	Acanthochromis_polyacanthus
ENSHCOG00000000219	mrpl28	100	65.079	ENSAMEG00000007031	MRPL28	98	65.079	Ailuropoda_melanoleuca
ENSHCOG00000000219	mrpl28	100	82.072	ENSACIG00000005641	mrpl28	100	82.072	Amphilophus_citrinellus
ENSHCOG00000000219	mrpl28	100	82.540	ENSAOCG00000024148	mrpl28	100	82.540	Amphiprion_ocellaris
ENSHCOG00000000219	mrpl28	100	82.869	ENSAPEG00000010705	mrpl28	100	82.869	Amphiprion_percula
ENSHCOG00000000219	mrpl28	100	81.275	ENSATEG00000013085	mrpl28	100	81.275	Anabas_testudineus
ENSHCOG00000000219	mrpl28	53	70.896	ENSAPLG00000006257	MRPL28	95	70.896	Anas_platyrhynchos
ENSHCOG00000000219	mrpl28	97	61.479	ENSACAG00000015301	MRPL28	99	60.769	Anolis_carolinensis
ENSHCOG00000000219	mrpl28	100	66.667	ENSANAG00000022423	MRPL28	98	66.667	Aotus_nancymaae
ENSHCOG00000000219	mrpl28	100	80.478	ENSACLG00000017376	mrpl28	100	80.478	Astatotilapia_calliptera
ENSHCOG00000000219	mrpl28	100	73.413	ENSAMXG00000001999	mrpl28	99	73.413	Astyanax_mexicanus
ENSHCOG00000000219	mrpl28	100	65.476	ENSBTAG00000016581	MRPL28	92	65.476	Bos_taurus
ENSHCOG00000000219	mrpl28	100	62.451	ENSCAFG00000019682	MRPL28	98	63.241	Canis_familiaris
ENSHCOG00000000219	mrpl28	100	63.492	ENSCAFG00020009225	MRPL28	98	63.492	Canis_lupus_dingo
ENSHCOG00000000219	mrpl28	100	64.683	ENSCHIG00000016968	MRPL28	98	64.683	Capra_hircus
ENSHCOG00000000219	mrpl28	96	63.071	ENSTSYG00000032509	MRPL28	94	63.071	Carlito_syrichta
ENSHCOG00000000219	mrpl28	62	70.513	ENSCAPG00000011681	MRPL28	96	70.513	Cavia_aperea
ENSHCOG00000000219	mrpl28	100	66.667	ENSCPOG00000007176	MRPL28	98	66.667	Cavia_porcellus
ENSHCOG00000000219	mrpl28	99	67.068	ENSCCAG00000030887	MRPL28	97	67.068	Cebus_capucinus
ENSHCOG00000000219	mrpl28	98	68.145	ENSCATG00000040016	MRPL28	97	68.145	Cercocebus_atys
ENSHCOG00000000219	mrpl28	100	65.873	ENSCLAG00000014858	MRPL28	98	65.873	Chinchilla_lanigera
ENSHCOG00000000219	mrpl28	100	66.270	ENSCSAG00000012838	MRPL28	98	66.270	Chlorocebus_sabaeus
ENSHCOG00000000219	mrpl28	97	73.878	ENSCPBG00000026390	MRPL28	99	73.092	Chrysemys_picta_bellii
ENSHCOG00000000219	mrpl28	99	43.846	ENSCING00000023726	-	96	43.846	Ciona_intestinalis
ENSHCOG00000000219	mrpl28	90	44.915	ENSCSAVG00000003761	-	83	44.915	Ciona_savignyi
ENSHCOG00000000219	mrpl28	100	65.079	ENSCANG00000033941	MRPL28	98	65.079	Colobus_angolensis_palliatus
ENSHCOG00000000219	mrpl28	100	66.667	ENSCGRG00001012825	Mrpl28	98	66.667	Cricetulus_griseus_chok1gshd
ENSHCOG00000000219	mrpl28	100	66.667	ENSCGRG00000014549	Mrpl28	98	66.667	Cricetulus_griseus_crigri
ENSHCOG00000000219	mrpl28	100	78.486	ENSCSEG00000008095	mrpl28	100	78.486	Cynoglossus_semilaevis
ENSHCOG00000000219	mrpl28	100	81.673	ENSCVAG00000005123	mrpl28	100	81.673	Cyprinodon_variegatus
ENSHCOG00000000219	mrpl28	100	72.619	ENSDARG00000057805	mrpl28	100	72.619	Danio_rerio
ENSHCOG00000000219	mrpl28	62	70.323	ENSDORG00000024147	Mrpl28	97	70.323	Dipodomys_ordii
ENSHCOG00000000219	mrpl28	97	63.265	ENSEBUG00000004106	mrpl28	98	63.265	Eptatretus_burgeri
ENSHCOG00000000219	mrpl28	99	66.265	ENSEASG00005018175	MRPL28	97	66.265	Equus_asinus_asinus
ENSHCOG00000000219	mrpl28	99	65.863	ENSECAG00000022663	MRPL28	97	65.863	Equus_caballus
ENSHCOG00000000219	mrpl28	99	64.659	ENSEEUG00000006626	MRPL28	90	64.659	Erinaceus_europaeus
ENSHCOG00000000219	mrpl28	100	79.365	ENSELUG00000014104	mrpl28	100	79.365	Esox_lucius
ENSHCOG00000000219	mrpl28	100	64.683	ENSFCAG00000041050	MRPL28	98	64.683	Felis_catus
ENSHCOG00000000219	mrpl28	59	70.068	ENSFALG00000004103	MRPL28	96	70.068	Ficedula_albicollis
ENSHCOG00000000219	mrpl28	100	64.683	ENSFDAG00000011002	MRPL28	98	64.683	Fukomys_damarensis
ENSHCOG00000000219	mrpl28	100	82.143	ENSFHEG00000006545	mrpl28	100	82.143	Fundulus_heteroclitus
ENSHCOG00000000219	mrpl28	100	78.884	ENSGMOG00000010597	mrpl28	98	78.884	Gadus_morhua
ENSHCOG00000000219	mrpl28	96	64.609	ENSGALG00000007473	MRPL28	99	63.710	Gallus_gallus
ENSHCOG00000000219	mrpl28	99	83.534	ENSGAFG00000012123	mrpl28	99	83.534	Gambusia_affinis
ENSHCOG00000000219	mrpl28	100	81.673	ENSGACG00000009641	mrpl28	98	81.673	Gasterosteus_aculeatus
ENSHCOG00000000219	mrpl28	97	71.837	ENSGAGG00000023391	MRPL28	99	71.084	Gopherus_agassizii
ENSHCOG00000000219	mrpl28	100	65.079	ENSGGOG00000006668	MRPL28	98	65.079	Gorilla_gorilla
ENSHCOG00000000219	mrpl28	88	82.727	ENSHBUG00000002357	mrpl28	94	82.727	Haplochromis_burtoni
ENSHCOG00000000219	mrpl28	100	65.476	ENSHGLG00000003807	MRPL28	98	65.476	Heterocephalus_glaber_female
ENSHCOG00000000219	mrpl28	100	65.476	ENSHGLG00100012704	MRPL28	98	65.476	Heterocephalus_glaber_male
ENSHCOG00000000219	mrpl28	100	75.397	ENSIPUG00000015984	mrpl28	99	75.397	Ictalurus_punctatus
ENSHCOG00000000219	mrpl28	99	65.863	ENSSTOG00000012316	MRPL28	95	65.992	Ictidomys_tridecemlineatus
ENSHCOG00000000219	mrpl28	100	65.079	ENSJJAG00000008947	Mrpl28	98	65.079	Jaculus_jaculus
ENSHCOG00000000219	mrpl28	100	80.080	ENSKMAG00000021277	mrpl28	100	80.080	Kryptolebias_marmoratus
ENSHCOG00000000219	mrpl28	99	76.587	ENSLBEG00000020499	mrpl28	99	76.587	Labrus_bergylta
ENSHCOG00000000219	mrpl28	100	57.576	ENSLACG00000009989	MRPL28	99	57.576	Latimeria_chalumnae
ENSHCOG00000000219	mrpl28	100	72.619	ENSLOCG00000014850	mrpl28	99	72.619	Lepisosteus_oculatus
ENSHCOG00000000219	mrpl28	100	63.889	ENSLAFG00000010776	MRPL28	99	63.889	Loxodonta_africana
ENSHCOG00000000219	mrpl28	100	66.270	ENSMFAG00000006698	MRPL28	98	66.270	Macaca_fascicularis
ENSHCOG00000000219	mrpl28	100	65.873	ENSMMUG00000000609	MRPL28	98	65.873	Macaca_mulatta
ENSHCOG00000000219	mrpl28	99	66.534	ENSMNEG00000027279	MRPL28	98	66.534	Macaca_nemestrina
ENSHCOG00000000219	mrpl28	100	66.270	ENSMLEG00000002439	MRPL28	98	66.270	Mandrillus_leucophaeus
ENSHCOG00000000219	mrpl28	100	82.869	ENSMAMG00000011487	mrpl28	100	82.869	Mastacembelus_armatus
ENSHCOG00000000219	mrpl28	100	80.478	ENSMZEG00005016524	mrpl28	100	80.478	Maylandia_zebra
ENSHCOG00000000219	mrpl28	100	65.873	ENSMAUG00000003487	Mrpl28	98	65.873	Mesocricetus_auratus
ENSHCOG00000000219	mrpl28	91	68.559	ENSMICG00000031344	MRPL28	98	65.079	Microcebus_murinus
ENSHCOG00000000219	mrpl28	100	65.873	ENSMOCG00000014836	Mrpl28	98	65.873	Microtus_ochrogaster
ENSHCOG00000000219	mrpl28	100	82.470	ENSMMOG00000012412	mrpl28	100	82.470	Mola_mola
ENSHCOG00000000219	mrpl28	100	67.460	ENSMODG00000016666	MRPL28	99	67.460	Monodelphis_domestica
ENSHCOG00000000219	mrpl28	99	83.133	ENSMALG00000011904	mrpl28	99	83.133	Monopterus_albus
ENSHCOG00000000219	mrpl28	100	63.095	MGP_CAROLIEiJ_G0021273	Mrpl28	98	63.095	Mus_caroli
ENSHCOG00000000219	mrpl28	100	63.095	ENSMUSG00000024181	Mrpl28	98	63.095	Mus_musculus
ENSHCOG00000000219	mrpl28	99	63.600	MGP_PahariEiJ_G0023591	Mrpl28	97	63.600	Mus_pahari
ENSHCOG00000000219	mrpl28	100	63.095	MGP_SPRETEiJ_G0022184	Mrpl28	98	63.095	Mus_spretus
ENSHCOG00000000219	mrpl28	100	65.873	ENSMPUG00000016020	MRPL28	98	65.873	Mustela_putorius_furo
ENSHCOG00000000219	mrpl28	100	65.873	ENSMLUG00000010009	MRPL28	98	65.873	Myotis_lucifugus
ENSHCOG00000000219	mrpl28	88	70.136	ENSNGAG00000016312	Mrpl28	95	70.136	Nannospalax_galili
ENSHCOG00000000219	mrpl28	100	80.876	ENSNBRG00000005544	mrpl28	100	80.876	Neolamprologus_brichardi
ENSHCOG00000000219	mrpl28	100	65.079	ENSNLEG00000031011	MRPL28	98	65.079	Nomascus_leucogenys
ENSHCOG00000000219	mrpl28	100	67.063	ENSMEUG00000000407	MRPL28	98	67.063	Notamacropus_eugenii
ENSHCOG00000000219	mrpl28	100	66.270	ENSODEG00000015538	MRPL28	98	66.270	Octodon_degus
ENSHCOG00000000219	mrpl28	100	81.275	ENSONIG00000005965	mrpl28	100	81.275	Oreochromis_niloticus
ENSHCOG00000000219	mrpl28	100	84.064	ENSORLG00000006806	mrpl28	100	84.064	Oryzias_latipes
ENSHCOG00000000219	mrpl28	100	84.064	ENSORLG00020002937	mrpl28	100	84.064	Oryzias_latipes_hni
ENSHCOG00000000219	mrpl28	100	83.665	ENSORLG00015005123	mrpl28	100	83.665	Oryzias_latipes_hsok
ENSHCOG00000000219	mrpl28	100	82.869	ENSOMEG00000013553	mrpl28	100	82.869	Oryzias_melastigma
ENSHCOG00000000219	mrpl28	98	66.532	ENSOGAG00000014941	MRPL28	97	66.532	Otolemur_garnettii
ENSHCOG00000000219	mrpl28	100	64.683	ENSOARG00000011786	MRPL28	98	64.683	Ovis_aries
ENSHCOG00000000219	mrpl28	100	64.286	ENSPPAG00000034473	MRPL28	98	64.286	Pan_paniscus
ENSHCOG00000000219	mrpl28	100	65.476	ENSPPRG00000002937	MRPL28	98	65.476	Panthera_pardus
ENSHCOG00000000219	mrpl28	100	65.476	ENSPTIG00000017626	MRPL28	98	65.476	Panthera_tigris_altaica
ENSHCOG00000000219	mrpl28	100	64.683	ENSPTRG00000047553	MRPL28	98	64.683	Pan_troglodytes
ENSHCOG00000000219	mrpl28	100	66.667	ENSPANG00000018773	MRPL28	98	66.667	Papio_anubis
ENSHCOG00000000219	mrpl28	99	73.600	ENSPKIG00000010370	mrpl28	99	73.600	Paramormyrops_kingsleyae
ENSHCOG00000000219	mrpl28	94	72.689	ENSPSIG00000011177	MRPL28	97	72.689	Pelodiscus_sinensis
ENSHCOG00000000219	mrpl28	99	83.534	ENSPMGG00000014190	mrpl28	99	83.534	Periophthalmus_magnuspinnatus
ENSHCOG00000000219	mrpl28	100	66.270	ENSPEMG00000019054	Mrpl28	98	66.270	Peromyscus_maniculatus_bairdii
ENSHCOG00000000219	mrpl28	99	63.454	ENSPMAG00000004202	mrpl28	97	63.454	Petromyzon_marinus
ENSHCOG00000000219	mrpl28	100	66.667	ENSPCIG00000000377	MRPL28	88	66.667	Phascolarctos_cinereus
ENSHCOG00000000219	mrpl28	100	81.275	ENSPFOG00000009485	mrpl28	100	81.275	Poecilia_formosa
ENSHCOG00000000219	mrpl28	100	82.072	ENSPLAG00000020059	mrpl28	100	82.072	Poecilia_latipinna
ENSHCOG00000000219	mrpl28	100	82.072	ENSPMEG00000012919	mrpl28	100	82.072	Poecilia_mexicana
ENSHCOG00000000219	mrpl28	100	81.275	ENSPREG00000022968	mrpl28	100	81.275	Poecilia_reticulata
ENSHCOG00000000219	mrpl28	88	68.778	ENSPPYG00000006906	MRPL28	100	68.778	Pongo_abelii
ENSHCOG00000000219	mrpl28	98	65.041	ENSPCAG00000011480	MRPL28	96	65.041	Procavia_capensis
ENSHCOG00000000219	mrpl28	91	68.559	ENSPCOG00000021895	MRPL28	98	65.079	Propithecus_coquereli
ENSHCOG00000000219	mrpl28	100	53.571	ENSPVAG00000000551	MRPL28	98	53.571	Pteropus_vampyrus
ENSHCOG00000000219	mrpl28	88	82.273	ENSPNYG00000005347	mrpl28	94	82.273	Pundamilia_nyererei
ENSHCOG00000000219	mrpl28	100	72.222	ENSPNAG00000009296	mrpl28	99	72.222	Pygocentrus_nattereri
ENSHCOG00000000219	mrpl28	100	63.492	ENSRNOG00000042720	Mrpl28	98	63.492	Rattus_norvegicus
ENSHCOG00000000219	mrpl28	100	65.873	ENSRBIG00000029953	MRPL28	98	65.873	Rhinopithecus_bieti
ENSHCOG00000000219	mrpl28	100	65.476	ENSRROG00000042756	MRPL28	98	65.476	Rhinopithecus_roxellana
ENSHCOG00000000219	mrpl28	98	66.129	ENSSBOG00000019789	MRPL28	98	66.129	Saimiri_boliviensis_boliviensis
ENSHCOG00000000219	mrpl28	100	69.048	ENSSHAG00000007606	MRPL28	99	69.048	Sarcophilus_harrisii
ENSHCOG00000000219	mrpl28	100	75.397	ENSSFOG00015006866	mrpl28	100	75.397	Scleropages_formosus
ENSHCOG00000000219	mrpl28	100	81.275	ENSSMAG00000013912	mrpl28	100	81.275	Scophthalmus_maximus
ENSHCOG00000000219	mrpl28	99	83.133	ENSSDUG00000005764	mrpl28	99	83.133	Seriola_dumerili
ENSHCOG00000000219	mrpl28	99	82.731	ENSSLDG00000000409	mrpl28	99	82.731	Seriola_lalandi_dorsalis
ENSHCOG00000000219	mrpl28	59	60.135	ENSSARG00000006277	-	98	60.135	Sorex_araneus
ENSHCOG00000000219	mrpl28	97	68.571	ENSSPUG00000015322	MRPL28	99	68.145	Sphenodon_punctatus
ENSHCOG00000000219	mrpl28	100	82.072	ENSSPAG00000011153	mrpl28	100	82.072	Stegastes_partitus
ENSHCOG00000000219	mrpl28	100	64.286	ENSSSCG00000007984	MRPL28	98	64.286	Sus_scrofa
ENSHCOG00000000219	mrpl28	100	81.673	ENSTRUG00000019877	mrpl28	100	81.673	Takifugu_rubripes
ENSHCOG00000000219	mrpl28	94	68.487	ENSTNIG00000002347	-	100	68.487	Tetraodon_nigroviridis
ENSHCOG00000000219	mrpl28	100	80.876	ENSTNIG00000007746	mrpl28	100	80.876	Tetraodon_nigroviridis
ENSHCOG00000000219	mrpl28	50	74.400	ENSTTRG00000009128	-	78	74.400	Tursiops_truncatus
ENSHCOG00000000219	mrpl28	100	66.270	ENSUAMG00000015724	MRPL28	94	66.270	Ursus_americanus
ENSHCOG00000000219	mrpl28	100	66.270	ENSUMAG00000021029	MRPL28	98	66.270	Ursus_maritimus
ENSHCOG00000000219	mrpl28	61	61.628	ENSVVUG00000013414	MRPL28	59	63.636	Vulpes_vulpes
ENSHCOG00000000219	mrpl28	100	65.873	ENSXETG00000011564	mrpl28	99	65.873	Xenopus_tropicalis
ENSHCOG00000000219	mrpl28	100	82.869	ENSXCOG00000012655	mrpl28	100	82.869	Xiphophorus_couchianus
ENSHCOG00000000219	mrpl28	100	82.470	ENSXMAG00000004293	mrpl28	100	82.470	Xiphophorus_maculatus