EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSHCOG00000000225 (Gene tree)
Gene ID
109524860
Gene Symbol
rpf2
Alias
bxdc1|ik:tdsubc_1a3|wu:fe17d08|wu:fj16d06|xx:tdsubc_1a3|zgc:77150
Full Name
ribosome production factor 2 homolog
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
5894 bases
Position
chrKV880232.1:921439-927332
Accession
109524860
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000005468BrixPF04427.189.4e-4711
ENSHCOP00000020776BrixPF04427.189.4e-4711
ENSHCOP00000020767BrixPF04427.184.2e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000005347-888-ENSHCOP00000020767295 (aa)--
ENSHCOT00000005323-1030XM_019884978ENSHCOP00000005468305 (aa)XP_019740537UPI00094E96AA
ENSHCOT00000005318-1049XM_019884979ENSHCOP00000020776305 (aa)XP_019740538UPI00094E96AA
Gene Model
Click here to download ENSHCOG00000000225's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000225's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000000225rpf29973.597ENSG00000197498RPF29678.155Homo_sapiens
ENSHCOG00000000225rpf29987.622ENSAPOG00000005714rpf29987.622Acanthochromis_polyacanthus
ENSHCOG00000000225rpf29973.927ENSAMEG00000015753RPF29973.927Ailuropoda_melanoleuca
ENSHCOG00000000225rpf25685.629ENSACIG00000006659rpf210085.629Amphilophus_citrinellus
ENSHCOG00000000225rpf210087.662ENSAOCG00000005173rpf210087.662Amphiprion_ocellaris
ENSHCOG00000000225rpf210087.662ENSAPEG00000004003rpf210087.662Amphiprion_percula
ENSHCOG00000000225rpf210088.599ENSATEG00000012818rpf210088.599Anabas_testudineus
ENSHCOG00000000225rpf28877.903ENSAPLG00000008812RPF29877.903Anas_platyrhynchos
ENSHCOG00000000225rpf210074.110ENSACAG00000011270RPF210074.110Anolis_carolinensis
ENSHCOG00000000225rpf29061.538ENSANAG00000033736-9162.271Aotus_nancymaae
ENSHCOG00000000225rpf29855.446ENSANAG00000021067-9854.455Aotus_nancymaae
ENSHCOG00000000225rpf29362.409ENSANAG00000025459-9258.042Aotus_nancymaae
ENSHCOG00000000225rpf29973.883ENSANAG00000026549-9773.883Aotus_nancymaae
ENSHCOG00000000225rpf29967.987ENSANAG00000034834-9967.987Aotus_nancymaae
ENSHCOG00000000225rpf29682.192ENSAMXG00000035201rpf29582.192Astyanax_mexicanus
ENSHCOG00000000225rpf29973.927ENSBTAG00000016584RPF29973.927Bos_taurus
ENSHCOG00000000225rpf29344.803WBGene00021830Y54E10A.109545.907Caenorhabditis_elegans
ENSHCOG00000000225rpf29973.927ENSCJAG00000038330RPF29876.050Callithrix_jacchus
ENSHCOG00000000225rpf29972.607ENSCAFG00000003918RPF29972.607Canis_familiaris
ENSHCOG00000000225rpf29973.196ENSCHIG00000022499RPF29773.196Capra_hircus
ENSHCOG00000000225rpf29973.927ENSTSYG00000013924RPF29973.927Carlito_syrichta
ENSHCOG00000000225rpf29958.763ENSCAPG00000014257RPF29658.076Cavia_aperea
ENSHCOG00000000225rpf29973.597ENSCPOG00000006797RPF29973.597Cavia_porcellus
ENSHCOG00000000225rpf29971.947ENSCCAG00000030365-9971.947Cebus_capucinus
ENSHCOG00000000225rpf28664.259ENSCCAG00000028906-9664.474Cebus_capucinus
ENSHCOG00000000225rpf29973.597ENSCCAG00000030864-9973.597Cebus_capucinus
ENSHCOG00000000225rpf29954.545ENSCCAG00000028553-9953.571Cebus_capucinus
ENSHCOG00000000225rpf28860.886ENSCATG00000029725-9874.419Cercocebus_atys
ENSHCOG00000000225rpf29958.086ENSCATG00000034352-9958.086Cercocebus_atys
ENSHCOG00000000225rpf29973.597ENSCLAG00000010393-9973.597Chinchilla_lanigera
ENSHCOG00000000225rpf28855.344ENSCLAG00000013252-9955.094Chinchilla_lanigera
ENSHCOG00000000225rpf29360.563ENSCLAG00000010874-9360.563Chinchilla_lanigera
ENSHCOG00000000225rpf29770.890ENSCHOG00000005865RPF29770.234Choloepus_hoffmanni
ENSHCOG00000000225rpf29876.821ENSCPBG00000006504RPF29876.821Chrysemys_picta_bellii
ENSHCOG00000000225rpf29258.007ENSCING00000008090-9158.007Ciona_intestinalis
ENSHCOG00000000225rpf29358.099ENSCSAVG00000010672-9658.099Ciona_savignyi
ENSHCOG00000000225rpf29974.587ENSCANG00000030665RPF29974.587Colobus_angolensis_palliatus
ENSHCOG00000000225rpf29973.597ENSCGRG00001007331-9973.597Cricetulus_griseus_chok1gshd
ENSHCOG00000000225rpf29859.532ENSCGRG00001005262-9659.532Cricetulus_griseus_chok1gshd
ENSHCOG00000000225rpf29774.576ENSCGRG00000006083Rpf29674.576Cricetulus_griseus_crigri
ENSHCOG00000000225rpf29983.113ENSCSEG00000015725rpf29983.113Cynoglossus_semilaevis
ENSHCOG00000000225rpf210085.902ENSCVAG00000001072rpf210085.902Cyprinodon_variegatus
ENSHCOG00000000225rpf29975.578ENSDARG00000043960rpf29875.578Danio_rerio
ENSHCOG00000000225rpf26871.569ENSDNOG00000039270RPF29971.921Dasypus_novemcinctus
ENSHCOG00000000225rpf26177.419ENSDORG00000026915Rpf210077.419Dipodomys_ordii
ENSHCOG00000000225rpf29350.526FBgn0038585Non39349.662Drosophila_melanogaster
ENSHCOG00000000225rpf29458.392ENSEBUG00000003640rpf28758.392Eptatretus_burgeri
ENSHCOG00000000225rpf29674.913ENSEASG00005006927-9773.379Equus_asinus_asinus
ENSHCOG00000000225rpf25270.395ENSEASG00005002363-9870.395Equus_asinus_asinus
ENSHCOG00000000225rpf29775.758ENSECAG00000017121RPF29974.257Equus_caballus
ENSHCOG00000000225rpf29759.322ENSEEUG00000006169RPF29959.322Erinaceus_europaeus
ENSHCOG00000000225rpf29983.224ENSELUG00000018518rpf210083.224Esox_lucius
ENSHCOG00000000225rpf29972.937ENSFCAG00000001527RPF29972.937Felis_catus
ENSHCOG00000000225rpf29975.658ENSFALG00000010816RPF29975.658Ficedula_albicollis
ENSHCOG00000000225rpf29973.267ENSFDAG00000005811-9973.267Fukomys_damarensis
ENSHCOG00000000225rpf28763.178ENSFDAG00000016721-10061.111Fukomys_damarensis
ENSHCOG00000000225rpf210085.065ENSFHEG00000011243rpf210085.065Fundulus_heteroclitus
ENSHCOG00000000225rpf29669.097ENSGMOG00000002521rpf29769.097Gadus_morhua
ENSHCOG00000000225rpf29977.303ENSGALG00000037087RPF29977.303Gallus_gallus
ENSHCOG00000000225rpf210084.918ENSGAFG00000009537rpf210084.918Gambusia_affinis
ENSHCOG00000000225rpf29982.736ENSGACG00000006507rpf29982.736Gasterosteus_aculeatus
ENSHCOG00000000225rpf29775.172ENSGAGG00000016221RPF29675.172Gopherus_agassizii
ENSHCOG00000000225rpf29959.406ENSGGOG00000001469RPF29959.076Gorilla_gorilla
ENSHCOG00000000225rpf29269.504ENSGGOG00000024187-9969.504Gorilla_gorilla
ENSHCOG00000000225rpf210088.636ENSHBUG00000021805rpf210088.636Haplochromis_burtoni
ENSHCOG00000000225rpf29370.775ENSHGLG00000012697-9870.775Heterocephalus_glaber_female
ENSHCOG00000000225rpf29469.097ENSHGLG00000012500-7670.486Heterocephalus_glaber_female
ENSHCOG00000000225rpf29874.916ENSHGLG00000001322RPF29874.916Heterocephalus_glaber_female
ENSHCOG00000000225rpf29363.504ENSHGLG00100002981-10061.888Heterocephalus_glaber_male
ENSHCOG00000000225rpf29874.916ENSHGLG00100012131RPF29874.916Heterocephalus_glaber_male
ENSHCOG00000000225rpf28960.741ENSHGLG00100009310-9960.741Heterocephalus_glaber_male
ENSHCOG00000000225rpf29468.750ENSHGLG00100012473-9370.139Heterocephalus_glaber_male
ENSHCOG00000000225rpf29370.775ENSHGLG00100000462-9870.775Heterocephalus_glaber_male
ENSHCOG00000000225rpf29969.935ENSIPUG00000016288rpf29969.805Ictalurus_punctatus
ENSHCOG00000000225rpf29858.528ENSSTOG00000013114RPF29758.528Ictidomys_tridecemlineatus
ENSHCOG00000000225rpf29969.759ENSJJAG00000009092Rpf210077.344Jaculus_jaculus
ENSHCOG00000000225rpf29987.255ENSKMAG00000014609rpf29987.255Kryptolebias_marmoratus
ENSHCOG00000000225rpf29986.645ENSLBEG00000011907rpf29978.502Labrus_bergylta
ENSHCOG00000000225rpf29973.179ENSLACG00000003942RPF210073.139Latimeria_chalumnae
ENSHCOG00000000225rpf29780.000ENSLOCG00000016992rpf29780.000Lepisosteus_oculatus
ENSHCOG00000000225rpf29677.055ENSLAFG00000018219RPF29577.055Loxodonta_africana
ENSHCOG00000000225rpf28859.191ENSMFAG00000036119-9959.191Macaca_fascicularis
ENSHCOG00000000225rpf29974.257ENSMFAG00000000417RPF29974.257Macaca_fascicularis
ENSHCOG00000000225rpf29956.818ENSMMUG00000042376-10056.818Macaca_mulatta
ENSHCOG00000000225rpf29974.257ENSMMUG00000021532RPF29678.641Macaca_mulatta
ENSHCOG00000000225rpf29960.396ENSMNEG00000031683RPF29960.066Macaca_nemestrina
ENSHCOG00000000225rpf29958.746ENSMLEG00000042472-10058.746Mandrillus_leucophaeus
ENSHCOG00000000225rpf210087.013ENSMAMG00000004267rpf210087.013Mastacembelus_armatus
ENSHCOG00000000225rpf210088.636ENSMZEG00005015632rpf210088.636Maylandia_zebra
ENSHCOG00000000225rpf29977.303ENSMGAG00000013429RPF29977.303Meleagris_gallopavo
ENSHCOG00000000225rpf28352.245ENSMAUG00000005049Rpf210052.245Mesocricetus_auratus
ENSHCOG00000000225rpf29961.386ENSMICG00000028979-9961.386Microcebus_murinus
ENSHCOG00000000225rpf29765.203ENSMICG00000038169-9964.026Microcebus_murinus
ENSHCOG00000000225rpf29972.937ENSMICG00000032086-9972.937Microcebus_murinus
ENSHCOG00000000225rpf29774.324ENSMOCG00000005634Rpf29674.324Microtus_ochrogaster
ENSHCOG00000000225rpf29779.599ENSMMOG00000014844rpf29979.599Mola_mola
ENSHCOG00000000225rpf29774.237ENSMODG00000017919RPF29774.237Monodelphis_domestica
ENSHCOG00000000225rpf29986.645ENSMALG00000019046rpf29986.645Monopterus_albus
ENSHCOG00000000225rpf29974.671MGP_CAROLIEiJ_G0015254Rpf210077.000Mus_caroli
ENSHCOG00000000225rpf29974.013ENSMUSG00000038510Rpf210075.000Mus_musculus
ENSHCOG00000000225rpf29973.684MGP_PahariEiJ_G0030671Rpf210076.000Mus_pahari
ENSHCOG00000000225rpf29974.013MGP_SPRETEiJ_G0016063Rpf210076.000Mus_spretus
ENSHCOG00000000225rpf29973.927ENSMPUG00000010183RPF28673.927Mustela_putorius_furo
ENSHCOG00000000225rpf28276.494ENSMLUG00000005676RPF29876.494Myotis_lucifugus
ENSHCOG00000000225rpf29774.411ENSNGAG00000009701Rpf29774.411Nannospalax_galili
ENSHCOG00000000225rpf210088.961ENSNBRG00000011087rpf210088.961Neolamprologus_brichardi
ENSHCOG00000000225rpf28573.077ENSNLEG00000033597-8573.077Nomascus_leucogenys
ENSHCOG00000000225rpf29973.267ENSNLEG00000027819RPF29973.267Nomascus_leucogenys
ENSHCOG00000000225rpf27774.576ENSNLEG00000011848-9474.561Nomascus_leucogenys
ENSHCOG00000000225rpf29557.785ENSMEUG00000006421RPF29757.785Notamacropus_eugenii
ENSHCOG00000000225rpf29964.356ENSODEG00000006584-9964.356Octodon_degus
ENSHCOG00000000225rpf29061.818ENSODEG00000002442-9461.818Octodon_degus
ENSHCOG00000000225rpf29774.915ENSODEG00000013529-9674.915Octodon_degus
ENSHCOG00000000225rpf28864.865ENSODEG00000006939-9664.865Octodon_degus
ENSHCOG00000000225rpf29263.333ENSODEG00000003531-10063.333Octodon_degus
ENSHCOG00000000225rpf29968.647ENSODEG00000019144-9968.647Octodon_degus
ENSHCOG00000000225rpf210088.636ENSONIG00000011383rpf210088.636Oreochromis_niloticus
ENSHCOG00000000225rpf29974.257ENSOCUG00000016028RPF29974.257Oryctolagus_cuniculus
ENSHCOG00000000225rpf210085.390ENSORLG00000015183rpf210085.390Oryzias_latipes
ENSHCOG00000000225rpf210085.065ENSORLG00020008756rpf29882.215Oryzias_latipes_hni
ENSHCOG00000000225rpf210085.390ENSORLG00015003841RPF210085.390Oryzias_latipes_hsok
ENSHCOG00000000225rpf210086.688ENSOMEG00000011508rpf210086.688Oryzias_melastigma
ENSHCOG00000000225rpf29972.607ENSOGAG00000007438RPF29972.607Otolemur_garnettii
ENSHCOG00000000225rpf29973.927ENSOARG00000009886-9973.927Ovis_aries
ENSHCOG00000000225rpf29973.927ENSOARG00000015548-9973.927Ovis_aries
ENSHCOG00000000225rpf28970.480ENSPPAG00000032089-9869.818Pan_paniscus
ENSHCOG00000000225rpf29973.597ENSPPAG00000035622RPF29973.597Pan_paniscus
ENSHCOG00000000225rpf29464.336ENSPPRG00000008363-9464.336Panthera_pardus
ENSHCOG00000000225rpf29973.267ENSPPRG00000000320-9973.267Panthera_pardus
ENSHCOG00000000225rpf29973.267ENSPTIG00000002060RPF29973.267Panthera_tigris_altaica
ENSHCOG00000000225rpf29973.597ENSPTRG00000018503RPF29973.597Pan_troglodytes
ENSHCOG00000000225rpf29974.257ENSPANG00000018834RPF29974.257Papio_anubis
ENSHCOG00000000225rpf29879.402ENSPKIG00000019506rpf29978.618Paramormyrops_kingsleyae
ENSHCOG00000000225rpf29975.082ENSPSIG00000014887RPF29975.082Pelodiscus_sinensis
ENSHCOG00000000225rpf29271.587ENSPEMG00000011413Rpf210069.611Peromyscus_maniculatus_bairdii
ENSHCOG00000000225rpf29773.649ENSPCIG00000028172RPF29772.607Phascolarctos_cinereus
ENSHCOG00000000225rpf210085.902ENSPFOG00000003396rpf210085.902Poecilia_formosa
ENSHCOG00000000225rpf210085.246ENSPLAG00000001226rpf210085.246Poecilia_latipinna
ENSHCOG00000000225rpf210085.902ENSPMEG00000007781rpf210085.902Poecilia_mexicana
ENSHCOG00000000225rpf210084.918ENSPREG00000020525rpf210084.918Poecilia_reticulata
ENSHCOG00000000225rpf29775.758ENSPPYG00000016925RPF29775.758Pongo_abelii
ENSHCOG00000000225rpf26477.949ENSPCAG00000002562RPF27678.075Procavia_capensis
ENSHCOG00000000225rpf29862.500ENSPCOG00000012785RPF29662.500Propithecus_coquereli
ENSHCOG00000000225rpf28079.184ENSPVAG00000003446RPF28276.892Pteropus_vampyrus
ENSHCOG00000000225rpf29682.313ENSPNAG00000000082rpf29682.313Pygocentrus_nattereri
ENSHCOG00000000225rpf29973.684ENSRNOG00000000587Rpf29973.684Rattus_norvegicus
ENSHCOG00000000225rpf29773.311ENSRBIG00000038389RPF29874.074Rhinopithecus_bieti
ENSHCOG00000000225rpf28271.486ENSRROG00000036685-9171.967Rhinopithecus_roxellana
ENSHCOG00000000225rpf28667.293ENSRROG00000039510-9867.293Rhinopithecus_roxellana
ENSHCOG00000000225rpf29974.587ENSRROG00000036457RPF29974.587Rhinopithecus_roxellana
ENSHCOG00000000225rpf28267.857ENSRROG00000028992-8467.460Rhinopithecus_roxellana
ENSHCOG00000000225rpf29742.574YKR081C-8844.040Saccharomyces_cerevisiae
ENSHCOG00000000225rpf29054.945ENSSBOG00000034420-9152.381Saimiri_boliviensis_boliviensis
ENSHCOG00000000225rpf28156.452ENSSBOG00000030264-8556.170Saimiri_boliviensis_boliviensis
ENSHCOG00000000225rpf28059.836ENSSBOG00000029182-9159.833Saimiri_boliviensis_boliviensis
ENSHCOG00000000225rpf29260.357ENSSBOG00000025434-9559.643Saimiri_boliviensis_boliviensis
ENSHCOG00000000225rpf28766.541ENSSBOG00000022486-9266.541Saimiri_boliviensis_boliviensis
ENSHCOG00000000225rpf29972.607ENSSHAG00000002212RPF29872.607Sarcophilus_harrisii
ENSHCOG00000000225rpf29978.571ENSSFOG00015020916rpf210077.451Scleropages_formosus
ENSHCOG00000000225rpf210087.013ENSSMAG00000017499rpf210087.013Scophthalmus_maximus
ENSHCOG00000000225rpf29985.185ENSSDUG00000010383rpf29685.185Seriola_dumerili
ENSHCOG00000000225rpf210087.662ENSSLDG00000022111rpf210087.662Seriola_lalandi_dorsalis
ENSHCOG00000000225rpf29952.145ENSSARG00000012063RPF29952.145Sorex_araneus
ENSHCOG00000000225rpf29875.427ENSSPUG00000005108RPF29675.427Sphenodon_punctatus
ENSHCOG00000000225rpf210087.338ENSSPAG00000008035rpf210087.338Stegastes_partitus
ENSHCOG00000000225rpf29973.267ENSSSCG00000004394RPF29973.267Sus_scrofa
ENSHCOG00000000225rpf29975.000ENSTGUG00000012034RPF29975.000Taeniopygia_guttata
ENSHCOG00000000225rpf210083.442ENSTRUG00000018264rpf210083.442Takifugu_rubripes
ENSHCOG00000000225rpf29676.094ENSTNIG00000002749rpf29776.094Tetraodon_nigroviridis
ENSHCOG00000000225rpf27973.967ENSTBEG00000017151RPF27973.967Tupaia_belangeri
ENSHCOG00000000225rpf29576.897ENSTTRG00000012357RPF29576.897Tursiops_truncatus
ENSHCOG00000000225rpf29974.587ENSUAMG00000013497RPF29974.587Ursus_americanus
ENSHCOG00000000225rpf29974.257ENSUMAG00000025488RPF29974.257Ursus_maritimus
ENSHCOG00000000225rpf29974.587ENSVPAG00000009562RPF29974.587Vicugna_pacos
ENSHCOG00000000225rpf29967.698ENSVVUG00000006593-9965.677Vulpes_vulpes
ENSHCOG00000000225rpf29366.909ENSVVUG00000021231-9966.909Vulpes_vulpes
ENSHCOG00000000225rpf29877.181ENSXETG00000021335rpf29777.181Xenopus_tropicalis
ENSHCOG00000000225rpf210081.639ENSXCOG00000001590rpf210081.639Xiphophorus_couchianus
ENSHCOG00000000225rpf29977.816ENSXMAG00000021706rpf210076.721Xiphophorus_maculatus

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